mRNA_E-fasciculatus_F_contig14473.3238.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14473.3238.1 vs. uniprot
Match: A0A6H5KV38_9PHAE (Exportin-T (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV38_9PHAE) HSP 1 Score: 292 bits (747), Expect = 1.400e-94 Identity = 146/153 (95.42%), Postives = 150/153 (98.04%), Query Frame = 1
Query: 121 MSAQQLELAVLYAYNPPGAGEEAAAVKAQATRYCEEVKGSQDGWRLALELFRVTVRPEARFFCLGCLQDALGARAGARRRVESQHDRFLIREAVMGWLAQVGGGGGAELDAQETFIRTKVAVVLALLVKSDYPETWTDAFDQLRSVLVVGSSS 579
MSAQQLELAVLYAYNPPG GEEAAAVK QATRYCEEVKGSQDGWRLALELFRVTVRPEARFFCLGCLQDALGARAGARRRVES+HDRFLIREAVMGWL QVGGGGGAELDAQETFIRTKVAVVLALLVKSDYPE+WTDAF+QLRSVLVVGSS+
Sbjct: 1 MSAQQLELAVLYAYNPPGVGEEAAAVKGQATRYCEEVKGSQDGWRLALELFRVTVRPEARFFCLGCLQDALGARAGARRRVESKHDRFLIREAVMGWLTQVGGGGGAELDAQETFIRTKVAVVLALLVKSDYPESWTDAFEQLRSVLVVGSSN 153
BLAST of mRNA_E-fasciculatus_F_contig14473.3238.1 vs. uniprot
Match: D7FNT8_ECTSI (Exportin-T n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNT8_ECTSI) HSP 1 Score: 298 bits (762), Expect = 4.820e-91 Identity = 150/152 (98.68%), Postives = 151/152 (99.34%), Query Frame = 1
Query: 121 MSAQQLELAVLYAYNPPGAGEEAAAVKAQATRYCEEVKGSQDGWRLALELFRVTVRPEARFFCLGCLQDALGARAGARRRVESQHDRFLIREAVMGWLAQVGGGGGAELDAQETFIRTKVAVVLALLVKSDYPETWTDAFDQLRSVLVVGSS 576
MSAQQLELAVLYAYNPPGAGEEAAAVKAQATRYCEEVKGSQDGWRLALELFRVTVRPEARFFCLGCLQDALGARAGARRRVESQHDRFLIREAVMGWL QVGGGGGAELDAQETFIRTKVAVVLALLVKSDYPETWTDAF+QLRSVLVVGSS
Sbjct: 1 MSAQQLELAVLYAYNPPGAGEEAAAVKAQATRYCEEVKGSQDGWRLALELFRVTVRPEARFFCLGCLQDALGARAGARRRVESQHDRFLIREAVMGWLTQVGGGGGAELDAQETFIRTKVAVVLALLVKSDYPETWTDAFEQLRSVLVVGSS 152
BLAST of mRNA_E-fasciculatus_F_contig14473.3238.1 vs. uniprot
Match: A0A836CAL0_9STRA (Exportin-T n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAL0_9STRA) HSP 1 Score: 124 bits (311), Expect = 2.140e-29 Identity = 70/153 (45.75%), Postives = 94/153 (61.44%), Query Frame = 1
Query: 124 SAQQLELAVLYAYNPPGAGEEAAA----VKAQATRYCEEVKGSQDGWRLALELFRVTVRPEARFFCLGCLQDALGARAGARRRVESQHDRFLIREAVMGWLAQVGGGGGAELDAQETFIRTKVAVVLALLVKSDYPETWTDAFDQLRSVLVVG 570
S Q++E+AVLYA G ++ QA+++C+EVK S +GW +AL+LF T RPEARF+ L LQDALGAR GA R+ R +RE ++GWL G L E +I TKV VVLALL+++D+PE W AF QL ++L G
Sbjct: 4 SPQEVEMAVLYAMGVAGGAXXXXXXXXXLRQQASQFCDEVKASPEGWVVALQLFSTTTRPEARFYALMVLQDALGARPGAACRLTDPEHRQRVRECLLGWLTSPG----VALADVEKYIVTKVGVVLALLLRADFPERWPHAFTQLAALLPRG 152
BLAST of mRNA_E-fasciculatus_F_contig14473.3238.1 vs. uniprot
Match: A0A5D6XP74_9STRA (Exportin-T n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XP74_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 6.770e-20 Identity = 60/154 (38.96%), Postives = 90/154 (58.44%), Query Frame = 1
Query: 124 SAQQLELAVLYAYNPPGAG---EEAAAVKAQATRYCEEVKGSQDGWRLALELFRVTVRPEARFFCLGCLQDALGARAGARRRVESQHDRFLIREAVMGWLAQVGGGGGAELDAQETFIRTKVAVVLALLVKSDYPETWTDAFDQLRSVLVVGSS 576
SA + E+AVL A+ A A A+K QA R+C VK S DGWRLALELF + E +F+ L LQ+AL A+ A V ++ +R A++ WL + A ++ + +++TK+AVV+ LL+K DYP W AF +L ++L G++
Sbjct: 4 SAAEFEMAVLCAFQYASASLADAPAQALKQQAERFCASVKASADGWRLALELFEFSEHEEVKFYALQALQEAL-AKGVADDAVAAR-----VRAALLAWLRE----NAAFVERKAPYLKTKLAVVVTLLIKRDYPARWPSAFAELLALLPQGAA 147
BLAST of mRNA_E-fasciculatus_F_contig14473.3238.1 vs. uniprot
Match: A0A2D4BIY3_PYTIN (Exportin-T n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BIY3_PYTIN) HSP 1 Score: 94.0 bits (232), Expect = 7.920e-19 Identity = 52/151 (34.44%), Postives = 87/151 (57.62%), Query Frame = 1
Query: 133 QLELAVLYAYNPPGAG---EEAAAVKAQATRYCEEVKGSQDGWRLALELFRVTVRPEARFFCLGCLQDALGARAGARRRVESQHDRFLIREAVMGWLAQVGGGGGAELDAQETFIRTKVAVVLALLVKSDYPETWTDAFDQLRSVLVVGSS 576
+ E+AVL A+ A ++A A+KAQA +C+ VK S GWR LELF ++ + +F+ L LQ+ L + +ES+ + A++ W+ G A ++ + +++TK+AVV+ LL+K DYP W AF +L ++L +G+S
Sbjct: 17 EFEMAVLCAFQYASASLADQQAQAMKAQAESFCDRVKASPTGWRACLELFEMSAHAQVKFYALQALQEML------TKGIESEAVTAEMHTALLAWMR----GNVAYIEREAPYLKTKLAVVITLLIKDDYPYRWPTAFTELIALLPLGAS 157
BLAST of mRNA_E-fasciculatus_F_contig14473.3238.1 vs. uniprot
Match: A0A662WTQ5_9STRA (Exportin-T (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WTQ5_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 1.350e-18 Identity = 55/153 (35.95%), Postives = 85/153 (55.56%), Query Frame = 1
Query: 127 AQQLELAVLYAYNPPGAG---EEAAAVKAQATRYCEEVKGSQDGWRLALELFRVTVRPEARFFCLGCLQDALGARAGARRRVESQHDRFLIREAVMGWLAQVGGGGGAELDAQETFIRTKVAVVLALLVKSDYPETWTDAFDQLRSVLVVGSS 576
A + E AVL A+ GA ++A A+K QA +C VK S DGWR L+LF + + +F+ L LQ+AL G V IR ++ WL A ++++ +++TK+AVV+ LL+K DYP+ W+ AF +L ++L G+S
Sbjct: 4 AAEFERAVLCAFQYAGASASDQQAQALKLQAESFCGSVKSSVDGWRYELQLFEHSQHEQVKFYALQALQEALTRGVGDDVAV-------AIRSELLNWLQT----HVAYVESKAPYLKTKLAVVVTLLIKRDYPDRWSTAFTELLALLPQGAS 145
BLAST of mRNA_E-fasciculatus_F_contig14473.3238.1 vs. uniprot
Match: A0A7S4DEX8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DEX8_HETAK) HSP 1 Score: 85.9 bits (211), Expect = 1.820e-18 Identity = 49/97 (50.52%), Postives = 64/97 (65.98%), Query Frame = 1
Query: 130 QQLELAVLYAYNPPG-AGEEAAAVKAQATRYCEEVKGSQDGWRLALELFRVTVRPEARFFCLGCLQDALGARAGARRRVESQHDRFLIREAVMGWLA 417
Q+LE+AVLYAY AG EAA +K QATR+C+ V+ S++GW+LAL L + EARFF L LQ+ALGAR G+ R+ + R R A+ WLA
Sbjct: 6 QELEMAVLYAYKLGNEAGHEAATMKDQATRFCDSVRQSENGWQLALSLLNESAHAEARFFALTTLQEALGARPGSPSRL-GEAGRDAARAALGAWLA 101
BLAST of mRNA_E-fasciculatus_F_contig14473.3238.1 vs. uniprot
Match: A0A8K1FDJ6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FDJ6_PYTOL) HSP 1 Score: 90.9 bits (224), Expect = 9.240e-18 Identity = 49/134 (36.57%), Postives = 74/134 (55.22%), Query Frame = 1
Query: 175 AGEEAAAVKAQATRYCEEVKGSQDGWRLALELFRVTVRPEARFFCLGCLQDALGARAGARRRVESQHDRFLIREAVMGWLAQVGGGGGAELDAQETFIRTKVAVVLALLVKSDYPETWTDAFDQLRSVLVVGSS 576
A E+A A K QA YC VK S GWRL LELF + E +F+ L +Q+AL + + IR ++ WL A ++ + F++TK+AVV+ +L+K DYP+ W AF +L ++L +G+S
Sbjct: 25 ADEQAQATKLQAETYCNAVKASSTGWRLCLELFEYSEHQEVKFYALQAIQEAL------TKGIADDAVTMQIRSELLAWLR----ANVAFVEGKAPFLKTKLAVVITVLIKRDYPDRWPTAFHELLALLPMGAS 148
BLAST of mRNA_E-fasciculatus_F_contig14473.3238.1 vs. uniprot
Match: K3X0X9_GLOUD (Exportin-T n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X0X9_GLOUD) HSP 1 Score: 86.3 bits (212), Expect = 3.680e-16 Identity = 53/151 (35.10%), Postives = 84/151 (55.63%), Query Frame = 1
Query: 133 QLELAVLYAYNPPGAG---EEAAAVKAQATRYCEEVKGSQDGWRLALELFRVTVRPEARFFCLGCLQDALGARAGARRRVESQHDRFLIREAVMGWLAQVGGGGGAELDAQETFIRTKVAVVLALLVKSDYPETWTDAFDQLRSVLVVGSS 576
+ E+AVL A+ A ++A +K QA +C +K S DGWR LELF + E +F+ L LQ+AL G V +Q IR ++ WL + + ++ + +++TK+AVV+ LL+K DYP+ W AF +L ++L G+S
Sbjct: 7 EFEMAVLCAFQYASASLKDQQAQVLKLQAESFCNSIKASVDGWRYELELFEFSEHQEVKFYALQALQEALVK--GVEDVVSAQ-----IRTELLTWLQE----NVSFVENKAPYLKTKLAVVITLLIKRDYPDRWPTAFFELMALLPKGAS 146
BLAST of mRNA_E-fasciculatus_F_contig14473.3238.1 vs. uniprot
Match: A0A8J4W059_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae 00238/432 TaxID=1284355 RepID=A0A8J4W059_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 9.840e-16 Identity = 51/149 (34.23%), Postives = 79/149 (53.02%), Query Frame = 1
Query: 139 ELAVLYAYNPPGAG---EEAAAVKAQATRYCEEVKGSQDGWRLALELFRVTVRPEARFFCLGCLQDALGARAGARRRVESQHDRFLIREAVMGWLAQVGGGGGAELDAQETFIRTKVAVVLALLVKSDYPETWTDAFDQLRSVLVVGSS 576
E AVL A+ GA ++A +K QA +C +K DGW+ L+LF + + +F+ L LQ+AL G V IR ++GWL ++ + +++TK+AVVL LL+K DYP+ W AF +L ++L G+S
Sbjct: 8 ECAVLCAFQYAGASLADQQAQTLKLQAESFCASIKSQSDGWKAELQLFHQSEHEQVKFYALQALQEALTTGVGDDVSV-------TIRVELLGWLQS----HVTYVETKAPYLKTKLAVVLTLLIKRDYPDRWPTAFTELLNLLPQGAS 145 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14473.3238.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14473.3238.1 >prot_E-fasciculatus_F_contig14473.3238.1 ID=prot_E-fasciculatus_F_contig14473.3238.1|Name=mRNA_E-fasciculatus_F_contig14473.3238.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=196bp KIRLTHYPCICTTCWSTTQRGAKGCSCCRVLARRTQPERAMSAQQLELAVback to top mRNA from alignment at E-fasciculatus_F_contig14473:923..3312+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14473.3238.1 ID=mRNA_E-fasciculatus_F_contig14473.3238.1|Name=mRNA_E-fasciculatus_F_contig14473.3238.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2390bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14473:923..3312+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14473:923..3312+ >mRNA_E-fasciculatus_F_contig14473.3238.1 ID=mRNA_E-fasciculatus_F_contig14473.3238.1|Name=mRNA_E-fasciculatus_F_contig14473.3238.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1176bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14473:923..3312+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |