prot_E-fasciculatus_F_contig14454.3233.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14454.3233.1
Unique Nameprot_E-fasciculatus_F_contig14454.3233.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length465
Homology
BLAST of mRNA_E-fasciculatus_F_contig14454.3233.1 vs. uniprot
Match: D7FGW0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGW0_ECTSI)

HSP 1 Score: 109 bits (273), Expect = 6.630e-22
Identity = 201/314 (64.01%), Postives = 210/314 (66.88%), Query Frame = 0
Query:   78 RAEQGGTPLGGVSASYDSVNAAAATPXXXXXXXXXXXXXXXXXXXXXXXXXXGAAAPRGPRMRYTVAGFTNDSIIPRGRSFATAAEAAAFSAGHASYAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQDHARLMREMDAVNAAAFTESFAYMTRETERLRAQQRTADRSRRLGEGEEXXXXXXXXXXXXXXXXXXXXXVSEVAXXXVAAAELPSSRMDLLARLAGLEEPMPARRTST-AVSLNSSAS 390
            RAEQ G   G VS  +DSV AAAA P XXXXXXXXXXXXXXXXXXXXXXXX GAAA RGPRMRYTVAGF N+SI+ RGRSFA+AAEAAAFSA  ASYAA                            XXXXXXXXXXXXXXXXXXXXXXXX                  XXXXXXXXXXXXXXX               L R M AVNAAA   + A +T E ERLRAQ+R ADRSRRLGE EEXXXXXXXXXXXXXXXXXXXXX     XX    AE+PS RMDLLARLAGLEE MPARR +  A SLNSSAS
Sbjct:  267 RAEQRGASPGVVSEWWDSVAAAAAAPAXXXXXXXXXXXXXXXXXXXXXXXXSGAAATRGPRMRYTVAGFANNSIMGRGRSFASAAEAAAFSASRASYAAAAEPVRFSNSSILPISTPRGLAIATATAXXXXXXXXXXXXXXXXXXXXXXXXRLRAQRRATERSGRLGEEXXXXXXXXXXXXXXXLS-------------LERTMAAVNAAAARRALASITLEAERLRAQRRAADRSRRLGEVEEXXXXXXXXXXXXXXXXXXXXXXXXXXXX----AEVPS-RMDLLARLAGLEERMPARRAAPGAASLNSSAS 562          
BLAST of mRNA_E-fasciculatus_F_contig14454.3233.1 vs. uniprot
Match: A0A6H5L829_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L829_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 7.220e-17
Identity = 106/185 (57.30%), Postives = 119/185 (64.32%), Query Frame = 0
Query:  277 LMREMDAVNAAAFTESFAYMTRETERLRAQQRTADRSRRLGEGEEXXXXXXXXXXXXXXXXXXXXXVSEVAXXXVAAAELPSSRMDLLARLAGLEEPMPARRTSTAVSLNSSASPPPSISATARVTRSVTRNTRWSSASSXXXXXXXXEVVAAAAIPTRVSPRRTRTMSVALERWVASGQGGGGG 461
            L R M AV+A A     A +T+  ERLRAQ+R ADRSRRL E E+        XXXXXXXXXXXXX     XXX     +PS RMDLLARLAGLEEPMPARR + A S +      PSISATA VTRS TRNTR   +  XXXXXXX EVV  A  PT VSPRR   +S A+  W+A+  GG GG
Sbjct:  365 LERTMAAVHATAARRELASITQVAERLRAQRRAADRSRRLEEVEKEERSLQREXXXXXXXXXXXXXXXXXXXXXXXXXAVPS-RMDLLARLAGLEEPMPARRAADATSAS------PSISATAGVTRSATRNTR---SXXXXXXXXXTEVVTVA--PTWVSPRRR--LSEAVATWLANAGGGDGG 535          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14454.3233.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FGW0_ECTSI6.630e-2264.01RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5L829_9PHAE7.220e-1757.30RING-type domain-containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 316..340

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14454contigE-fasciculatus_F_contig14454:890..2284 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14454.3233.1mRNA_E-fasciculatus_F_contig14454.3233.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14454 199..3309 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14454.3233.1 ID=prot_E-fasciculatus_F_contig14454.3233.1|Name=mRNA_E-fasciculatus_F_contig14454.3233.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=465bp
MGSAAAARQATFEAYAVQHQANLLATRARREAELRDQHQTQLTAAREVQQ
AAARALAEAQARQAAGTRARQVAAAEARAEQGGTPLGGVSASYDSVNAAA
ATPAAAAPAAAAPTAAAAPAAAAAAATPSGAAAPRGPRMRYTVAGFTNDS
IIPRGRSFATAAEAAAFSAGHASYAAAAAAAAAAAPEPASSNSSMTPTNR
PRTFATAAAGAANAAAAARAEARSAATAAAAAAAAATTASEQLRARMRAD
DRSRRLGGDEEEERSRQRERQQDHARLMREMDAVNAAAFTESFAYMTRET
ERLRAQQRTADRSRRLGEGEEEEERSQQRERQQEEEARRRDGVSEVAAAA
VAAAELPSSRMDLLARLAGLEEPMPARRTSTAVSLNSSASPPPSISATAR
VTRSVTRNTRWSSASSAPASATATEVVAAAAIPTRVSPRRTRTMSVALER
WVASGQGGGGGPSA*
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