prot_E-fasciculatus_F_contig14445.3230.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14445.3230.1
Unique Nameprot_E-fasciculatus_F_contig14445.3230.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length147
Homology
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BLAST of mRNA_E-fasciculatus_F_contig14445.3230.1 vs. uniprot
Match: D8LGK4_ECTSI (alpha-1,2-Mannosidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGK4_ECTSI)

HSP 1 Score: 223 bits (567), Expect = 3.650e-65
Identity = 117/143 (81.82%), Postives = 123/143 (86.01%), Query Frame = 0 
Query:    1 MAMAPKAEIPLYHQNKLG-SRTVSTRRRRSAGAGGSKSKRNVGGSLCWSVLVVGILVLVAFGLGTFTGIELAQSPGRTGTSLHDGNHAPRGSFMPKLEHANGEEQVGGGAGERINRDKPAAQAPWKAQARGADDQVRPPAAPG 142
            MAMAPKAEIPLYHQNKLG SR  STRRRRS   G SKSKRNVGGSLCWSVLVVG LV VAFGLGTFTGIELAQ+PG +GTSLH+GNHAPRGSFMP LEH +G+EQVGGGAG R  R+KPA   PWKAQARG D QVRPPAAPG
Sbjct:    1 MAMAPKAEIPLYHQNKLGGSRAWSTRRRRSGAGGSSKSKRNVGGSLCWSVLVVGTLVFVAFGLGTFTGIELAQAPGGSGTSLHNGNHAPRGSFMPNLEHPSGQEQVGGGAGGRNKREKPAPLPPWKAQARGGDHQVRPPAAPG 143
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14445.3230.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LGK4_ECTSI3.650e-6581.82alpha-1,2-Mannosidase n=2 Tax=Ectocarpus TaxID=287... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 45..68
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 69..147
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..44
NoneNo IPR availableTMHMMTMhelixcoord: 46..68

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14445contigE-fasciculatus_F_contig14445:1356..3243 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14445.3230.1mRNA_E-fasciculatus_F_contig14445.3230.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14445 1324..3243 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14445.3230.1 ID=prot_E-fasciculatus_F_contig14445.3230.1|Name=mRNA_E-fasciculatus_F_contig14445.3230.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=147bp
MAMAPKAEIPLYHQNKLGSRTVSTRRRRSAGAGGSKSKRNVGGSLCWSVL
VVGILVLVAFGLGTFTGIELAQSPGRTGTSLHDGNHAPRGSFMPKLEHAN
GEEQVGGGAGERINRDKPAAQAPWKAQARGADDQVRPPAAPGGGDGG
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