prot_E-fasciculatus_F_contig14437.3223.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14437.3223.1
Unique Nameprot_E-fasciculatus_F_contig14437.3223.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length105
Homology
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BLAST of mRNA_E-fasciculatus_F_contig14437.3223.1 vs. uniprot
Match: A0A6H5K7C9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K7C9_9PHAE)

HSP 1 Score: 132 bits (333), Expect = 1.970e-38
Identity = 78/88 (88.64%), Postives = 81/88 (92.05%), Query Frame = 0 
Query:   16 MGRILRSMVARTTWVVLGVQLLAGLCEGSAFASGATGTPAHAGGGSNAQGNGGRAGAGAAMSSKTSSLLSSAKSGVRDFFATASSASD 103
            MG I R+MV RTTW+VLGVQLLAGLCEGSAFAS A GTP HA GGSNAQGNGGRAGAGAAMS+KTSSLLSSAKSGVRDFFATASSASD
Sbjct:    1 MGCIRRAMVTRTTWIVLGVQLLAGLCEGSAFASSAAGTPTHA-GGSNAQGNGGRAGAGAAMSAKTSSLLSSAKSGVRDFFATASSASD 87
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14437.3223.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K7C9_9PHAE1.970e-3888.64Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 50..104
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..49
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 30..41
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 42..49
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..43
score: 0.466

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14437contigE-fasciculatus_F_contig14437:1923..3235 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14437.3223.1mRNA_E-fasciculatus_F_contig14437.3223.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14437 1923..3235 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14437.3223.1 ID=prot_E-fasciculatus_F_contig14437.3223.1|Name=mRNA_E-fasciculatus_F_contig14437.3223.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=105bp
RGGVPPCRARQGRIPMGRILRSMVARTTWVVLGVQLLAGLCEGSAFASGA
TGTPAHAGGGSNAQGNGGRAGAGAAMSSKTSSLLSSAKSGVRDFFATASS
ASDR*
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