prot_E-fasciculatus_F_contig14430.3221.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14430.3221.1
Unique Nameprot_E-fasciculatus_F_contig14430.3221.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length145
Homology
BLAST of mRNA_E-fasciculatus_F_contig14430.3221.1 vs. uniprot
Match: D8LPL1_ECTSI (HTH myb-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPL1_ECTSI)

HSP 1 Score: 146 bits (368), Expect = 3.550e-42
Identity = 70/90 (77.78%), Postives = 77/90 (85.56%), Query Frame = 0
Query:    2 VRRNKGMWTREEHDAFLGGLRQHGSNIHALALAVPTRSALQIRTHSQKYFDKIEGGMQFPAKPYPSQYDRTSGKSCIARGAYEYGAVQEQ 91
            +R+NKG WTREEH+AFL GL QH SN HAL   VPTRSALQIRTH+QKYFDKIE G +FPA+PYPSQYD  SGKSCIARGAYEYGAV +Q
Sbjct:    4 IRKNKGKWTREEHEAFLSGLWQHESNSHAL---VPTRSALQIRTHAQKYFDKIERGEKFPAQPYPSQYDAASGKSCIARGAYEYGAVNQQ 90          
BLAST of mRNA_E-fasciculatus_F_contig14430.3221.1 vs. uniprot
Match: D7FXQ4_ECTSI (HTH myb-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXQ4_ECTSI)

HSP 1 Score: 105 bits (261), Expect = 2.850e-24
Identity = 48/91 (52.75%), Postives = 66/91 (72.53%), Query Frame = 0
Query:    2 VRRNKGMWTREEHDAFLGGLRQHG-SNIHALALAVPTRSALQIRTHSQKYFDKIEGGMQFPAKPYPSQYDRTSGKSCIARGAYEYGAVQEQ 91
            +RRNKG WT EEH  FL G+     S++ A+A  +PTR+ LQ+RTH+QKYFDK++ G  FP +PYPSQYDR +G++ +A GAY Y A + +
Sbjct:    3 IRRNKGRWTHEEHAEFLRGVELFKRSDLEAVASMLPTRTILQVRTHAQKYFDKVDKGEPFPNEPYPSQYDRAAGRAGVAAGAYMYSAPKHE 93          
BLAST of mRNA_E-fasciculatus_F_contig14430.3221.1 vs. uniprot
Match: A0A6H5KVV5_9PHAE (HTH myb-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVV5_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 3.000e-24
Identity = 48/91 (52.75%), Postives = 66/91 (72.53%), Query Frame = 0
Query:    2 VRRNKGMWTREEHDAFLGGLRQHG-SNIHALALAVPTRSALQIRTHSQKYFDKIEGGMQFPAKPYPSQYDRTSGKSCIARGAYEYGAVQEQ 91
            +RRNKG WT EEH  FL G+     S++ A+A  +PTR+ LQ+RTH+QKYFDK++ G  FP +PYPSQYDR +G++ +A GAY Y A + +
Sbjct:    3 IRRNKGRWTHEEHAVFLRGVELFKRSDLEAVASMLPTRTILQVRTHAQKYFDKVDKGEPFPTEPYPSQYDRAAGRAGVAAGAYMYSAPKHE 93          
BLAST of mRNA_E-fasciculatus_F_contig14430.3221.1 vs. uniprot
Match: A0A6H5L149_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L149_9PHAE)

HSP 1 Score: 98.2 bits (243), Expect = 4.390e-21
Identity = 46/85 (54.12%), Postives = 62/85 (72.94%), Query Frame = 0
Query:    2 VRRNKGMWTREEHDAFLGGLRQHG-SNIHALALAVPTRSALQIRTHSQKYFDKIEGGMQFPAKPYPSQYDRTSGKSCIARGAYEY 85
            +RRNKG WT EEHDAFL G+R+   +N   +A  +PTR+ LQIRTH+QKY+ K++ G  FP +PYPSQ++  +GKS  + GAY Y
Sbjct:    3 IRRNKGRWTSEEHDAFLRGVRRFKRNNWVGIATLLPTRTVLQIRTHAQKYYAKVDKGEPFPDEPYPSQHEAAAGKSSASAGAYLY 87          
BLAST of mRNA_E-fasciculatus_F_contig14430.3221.1 vs. uniprot
Match: A0A6H5JC35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC35_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 1.070e-15
Identity = 37/65 (56.92%), Postives = 46/65 (70.77%), Query Frame = 0
Query:    5 NKGMWTREEHDAFLGGLRQHGSNIHALALAVPTRSALQIRTHSQKYFDKIEGGMQFPAKPYPSQY 69
            N G WT+EEHDAFL GL  HG N   +A  V TRSA+Q+RTH QKYF K++ G +FP +PY S +
Sbjct:    6 NNGRWTKEEHDAFLQGLVLHGKNWDLIAPIVKTRSAVQVRTHGQKYFKKVDKGERFPEEPYESMF 70          
BLAST of mRNA_E-fasciculatus_F_contig14430.3221.1 vs. uniprot
Match: D7FXJ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXJ4_ECTSI)

HSP 1 Score: 69.3 bits (168), Expect = 5.490e-13
Identity = 33/61 (54.10%), Postives = 44/61 (72.13%), Query Frame = 0
Query:    2 VRRNKGMWTREEHDAFLGGLRQHG-SNIHALALAVPTRSALQIRTHSQKYFDKIEGGMQFP 61
            +RRNKG WT EEH AFL G+R+   +N   +A  +PTR+ LQIRTH+QKY+ K++ G  FP
Sbjct:    8 IRRNKGRWTSEEHHAFLRGVRRFKRNNWVGIATLLPTRTVLQIRTHAQKYYAKVDKGEPFP 68          
BLAST of mRNA_E-fasciculatus_F_contig14430.3221.1 vs. uniprot
Match: D8LU61_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU61_ECTSI)

HSP 1 Score: 65.5 bits (158), Expect = 6.190e-10
Identity = 33/69 (47.83%), Postives = 42/69 (60.87%), Query Frame = 0
Query:    1 MVRRNKGMWTREEHDAFLGGLRQHGSNIHALAL----AVPTRSALQIRTHSQKYFDKIEGGMQFPAKPY 65
            M RRNKG WT++EH+ FL  + Q G    +  L     V TRS  Q+RTH+QKYF +I  G  FP +PY
Sbjct:    1 MRRRNKGRWTKDEHERFLSVVGQLGKTTESWKLISKFVVTTRSPAQVRTHAQKYFQRIGQGRPFPDEPY 69          
BLAST of mRNA_E-fasciculatus_F_contig14430.3221.1 vs. uniprot
Match: A0A1E7FKC4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FKC4_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 2.730e-9
Identity = 25/46 (54.35%), Postives = 33/46 (71.74%), Query Frame = 0
Query:    9 WTREEHDAFLGGLRQHGSNIHALALAVPTRSALQIRTHSQKYFDKI 54
            WT+EEHDAFL GL+ +G     +A  V TR+ +Q RTH+QKYF K+
Sbjct:    2 WTKEEHDAFLSGLKMYGKEWKKVAAKVKTRTVVQTRTHAQKYFQKL 47          
BLAST of mRNA_E-fasciculatus_F_contig14430.3221.1 vs. uniprot
Match: A0A7S2WSS8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WSS8_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 7.490e-9
Identity = 28/58 (48.28%), Postives = 37/58 (63.79%), Query Frame = 0
Query:    2 VRRNKGMWTREEHDAFLGGLRQHGSNIHALALAVPTRSALQIRTHSQKYFDKIEGGMQ 59
            V+ N G WT EEH+ FL GL+ HG     +A  + TR+ +QIRTH+QKYF K+    Q
Sbjct:  129 VKENTGRWTMEEHNMFLEGLKLHGKGWKQIAQMIKTRTVVQIRTHAQKYFQKLAKAQQ 186          
BLAST of mRNA_E-fasciculatus_F_contig14430.3221.1 vs. uniprot
Match: A0A7S3K7N2_EUPCR (Hypothetical protein (Fragment) n=1 Tax=Euplotes crassus TaxID=5936 RepID=A0A7S3K7N2_EUPCR)

HSP 1 Score: 59.3 bits (142), Expect = 1.050e-8
Identity = 24/54 (44.44%), Postives = 39/54 (72.22%), Query Frame = 0
Query:    2 VRRNKGMWTREEHDAFLGGLRQHGSNIHALALAVPTRSALQIRTHSQKYFDKIE 55
            +++ +G W+ EEH  F+  L+++G N   L   +PTR+++QIR+H QKYFDKI+
Sbjct:   11 IQKERGRWSFEEHQTFVNCLKKYGKNWDILEEMIPTRTSIQIRSHLQKYFDKIK 64          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14430.3221.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPL1_ECTSI3.550e-4277.78HTH myb-type domain-containing protein n=1 Tax=Ect... [more]
D7FXQ4_ECTSI2.850e-2452.75HTH myb-type domain-containing protein n=1 Tax=Ect... [more]
A0A6H5KVV5_9PHAE3.000e-2452.75HTH myb-type domain-containing protein n=1 Tax=Ect... [more]
A0A6H5L149_9PHAE4.390e-2154.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JC35_9PHAE1.070e-1556.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXJ4_ECTSI5.490e-1354.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LU61_ECTSI6.190e-1047.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A1E7FKC4_9STRA2.730e-954.35Uncharacterized protein (Fragment) n=1 Tax=Fragila... [more]
A0A7S2WSS8_9STRA7.490e-948.28Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3K7N2_EUPCR1.050e-844.44Hypothetical protein (Fragment) n=1 Tax=Euplotes c... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 88..139
NoneNo IPR availableGENE3D1.10.10.60coord: 7..56
e-value: 4.5E-11
score: 44.7
IPR001005SANT/Myb domainSMARTSM00717santcoord: 5..53
e-value: 4.4E-5
score: 32.9
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 6..50
e-value: 3.9E-7
score: 30.2
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 1..55
score: 12.954
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 2..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14430contigE-fasciculatus_F_contig14430:423..981 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14430.3221.1mRNA_E-fasciculatus_F_contig14430.3221.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14430 423..981 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14430.3221.1 ID=prot_E-fasciculatus_F_contig14430.3221.1|Name=mRNA_E-fasciculatus_F_contig14430.3221.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=145bp
MVRRNKGMWTREEHDAFLGGLRQHGSNIHALALAVPTRSALQIRTHSQKY
FDKIEGGMQFPAKPYPSQYDRTSGKSCIARGAYEYGAVQEQQQQQQQLQQ
QQLQQQQQQQQQQQEQQQQQQQQQQQQQQEQQQQQYRESHRVER*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009057Homeobox-like_sf
IPR017930Myb_dom
IPR001005SANT/Myb