mRNA_E-fasciculatus_F_contig14422.3218.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig14422.3218.1
Unique NamemRNA_E-fasciculatus_F_contig14422.3218.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig14422.3218.1 vs. uniprot
Match: A0A6H5K9D2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9D2_9PHAE)

HSP 1 Score: 553 bits (1426), Expect = 6.440e-183
Identity = 265/272 (97.43%), Postives = 268/272 (98.53%), Query Frame = 1 
Query:    7 QDHGPVGHGRVTCISIYGGPELDFGEGPGKILWVDNLGAAAGTLEEFLPFFASEKHKKVWHNYGFDRHVMFNSPDNREEQRIDCVGFAGDTMHMARLWDTSMEKYTGDTGFSLEALSLKLLGEGQRKTPMKELFGIPKLKKDGTPGNLLVLPPIDEIQTRPEVRPRFIEYSAYDAQATWLVHRELMQKLREMPWKDELTMLDFYETYYVPFGELLTDMERTGIYVEAKGYLKDIEVQARNDKKKAEETFLSWVKKIQPGAETLNPSSSTQIQ 822
            +DHGPVGHGRVTCISIYGGPELDFGEGPGKILWVDNLG AAGTLEEFLPFFASE+HKKVWHNYGFDRHVMFNSPDNREEQRIDCVGFAGDTMHMARLWDTSMEKY GDTGFSLEALSLKLLGEGQRKTPMKELFGIPKLKKDGTPGNLLVLPPIDEIQTRPEVRPRFIEYSAYDAQATWLVHRELMQKLREMPWKD +TMLDFYE YYVPFGELLTDMERTGIYVEAKGYLKDIEVQARNDKKKAEETFLSWVKKIQPGAETLNPSSSTQIQ
Sbjct:  791 KDHGPVGHGRVTCISIYGGPELDFGEGPGKILWVDNLGGAAGTLEEFLPFFASERHKKVWHNYGFDRHVMFNSPDNREEQRIDCVGFAGDTMHMARLWDTSMEKYAGDTGFSLEALSLKLLGEGQRKTPMKELFGIPKLKKDGTPGNLLVLPPIDEIQTRPEVRPRFIEYSAYDAQATWLVHRELMQKLREMPWKDGMTMLDFYEMYYVPFGELLTDMERTGIYVEAKGYLKDIEVQARNDKKKAEETFLSWVKKIQPGAETLNPSSSTQIQ 1062
[Close]
BLAST of mRNA_E-fasciculatus_F_contig14422.3218.1 vs. uniprot
Match: D8LMQ5_ECTSI (Pol1-like DNA polymerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMQ5_ECTSI)

HSP 1 Score: 546 bits (1408), Expect = 2.400e-181
Identity = 262/272 (96.32%), Postives = 267/272 (98.16%), Query Frame = 1 
Query:    7 QDHGPVGHGRVTCISIYGGPELDFGEGPGKILWVDNLGAAAGTLEEFLPFFASEKHKKVWHNYGFDRHVMFNSPDNREEQRIDCVGFAGDTMHMARLWDTSMEKYTGDTGFSLEALSLKLLGEGQRKTPMKELFGIPKLKKDGTPGNLLVLPPIDEIQTRPEVRPRFIEYSAYDAQATWLVHRELMQKLREMPWKDELTMLDFYETYYVPFGELLTDMERTGIYVEAKGYLKDIEVQARNDKKKAEETFLSWVKKIQPGAETLNPSSSTQIQ 822
            +DHGPVGHGRVTCISIYGGP+LDFGEGPGKILWVDNLGAAAGTLEEFLPFFASEKHKKVWHNYGFDRHVMFNSPDNREEQRIDCVGFAGDTMHMARLWDTSMEKY GDTGFSLEALSLKLLGEGQRKTPMKELFGIPKLKKDGTPGNLLVLPPIDEIQTRPEVRPRFIEYSAYDAQATWLVHRELMQKLREM WKD +TMLDFYE YYVPFGELLTDMERTGIYVEAK YL+DIEVQARNDKKKAEETFL+WVKKIQPGAETLNPSSSTQIQ
Sbjct:  661 KDHGPVGHGRVTCISIYGGPDLDFGEGPGKILWVDNLGAAAGTLEEFLPFFASEKHKKVWHNYGFDRHVMFNSPDNREEQRIDCVGFAGDTMHMARLWDTSMEKYAGDTGFSLEALSLKLLGEGQRKTPMKELFGIPKLKKDGTPGNLLVLPPIDEIQTRPEVRPRFIEYSAYDAQATWLVHRELMQKLREMSWKDGMTMLDFYEMYYVPFGELLTDMERTGIYVEAKDYLQDIEVQARNDKKKAEETFLNWVKKIQPGAETLNPSSSTQIQ 932
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BLAST of mRNA_E-fasciculatus_F_contig14422.3218.1 vs. uniprot
Match: A0A7S1XY06_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XY06_9STRA)

HSP 1 Score: 315 bits (808), Expect = 2.610e-103
Identity = 153/276 (55.43%), Postives = 200/276 (72.46%), Query Frame = 1 
Query:   16 GPVGHGRVTCISIYGGPELDFGEGPGKILWVDNLGAAAGTLEEFLPFFASEKHKKVWHNYGFDRHVMFNSPDNREEQRIDCVGFAGDTMHMARLWDTSMEKYTGDTGFSLEALSLKLLGEGQRKTPMKELFGIPKLKKDGTPGNLLVLPPIDEIQTRPEVRPRFIEYSAYDAQATWLVHRELMQKLREMPWK-------DELTMLDFYETYYVPFGELLTDMERTGIYVEAKGYLKDIEVQARNDKKKAEETFLSWVKKIQPGAETLNPSSSTQIQ 822
            GPVG+G VTC+SIY GP++DFG+GPG  LW++N G + G L+EF  +F   ++KKVWHNYGFDRHVM+N       + +D  GF GDTMHMARLW+T  +K  G  G+SLEAL+  LLG  +RK PMKE+FG+ KLKKDGTPG+L V+PP+ ++Q RPE R ++I+YSAYDA+ TWL+  +L   LR+M W+       +E TM DFY+ YYVPFGELLTDMER GI+VEA+ YL +++V A  D+KKA  TF  W   + P    +NP+SSTQ+Q
Sbjct:   85 GPVGNGEVTCVSIYSGPDVDFGDGPGTALWIENDGESRGLLDEFKAWFEDPRYKKVWHNYGFDRHVMYN-------EGVDVQGFGGDTMHMARLWNTGRDK--GGGGYSLEALTEDLLG--RRKVPMKEIFGVAKLKKDGTPGSLKVVPPVRDLQFRPEHRRKWIKYSAYDAEGTWLLRDKLEGLLRQMSWEPVGRPQEEEHTMWDFYQMYYVPFGELLTDMERNGIHVEAETYLAEVQVTAEADRKKALRTFRDWAASVNPNGRFINPASSTQLQ 349
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BLAST of mRNA_E-fasciculatus_F_contig14422.3218.1 vs. uniprot
Match: A0A7S2K5E3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K5E3_9STRA)

HSP 1 Score: 285 bits (729), Expect = 3.810e-87
Identity = 142/271 (52.40%), Postives = 186/271 (68.63%), Query Frame = 1 
Query:   16 GPVGHGRVTCISIYGGPELDFG--EGPGKILWVDNLGAAAGTLEEFLPFFASEKHKKVWHNYGFDRHVMFNSPDNREEQRIDCVGFAGDTMHMARLWDTSMEKYTGDTGFSLEALSLKLLGEGQRKTPMKELFGIPKLKKDGTPGNLLVLPPIDEIQTRPEVRPRFIEYSAYDAQATWLVHRELMQKLREMPWKDELTMLDFYETYYVPFGELLTDMERTGIYVEAKGYLKDIEVQARNDKKKAEETFLSWV-KKIQPGAETLNPSSSTQI 819
            GPVG+G VTC S+Y GP+ D+G  +GPG  LW+DNL  +AG L+ F P+F  E+  KVWHNYGFDRHVM+N       + IDC+GF GDTMHMARL DT   KY    G+SLEAL+ +LLG  +RK PMKE+FG+P+L+KDGT G+L+ LP I+++Q +PE R  +I YSAYDA+ TWL+ R+L + L EMPWK    +  +Y  Y   FGE+LTDMER G+ V+A  YL  +EVQAR D++     F  W   +I P    +NP+SS Q+
Sbjct:  257 GPVGNGYVTCASVYSGPDFDYGLGDGPGTSLWIDNLDDSAGLLQMFKPWFEDERFLKVWHNYGFDRHVMWN-------EGIDCLGFGGDTMHMARLQDTGRSKYGQGRGYSLEALTDELLG--RRKKPMKEIFGVPRLRKDGTAGSLVDLPAIEDMQRKPEFRSNWIAYSAYDAEGTWLIRRKLQELLEEMPWKHGENLYYYYFKYLREFGEVLTDMERRGVRVDAHDYLAGVEVQAREDREYHVAAFRKWAASRIGPDGLAINPASSLQL 518
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BLAST of mRNA_E-fasciculatus_F_contig14422.3218.1 vs. uniprot
Match: A0A7S3QI54_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QI54_9STRA)

HSP 1 Score: 278 bits (711), Expect = 5.920e-86
Identity = 140/272 (51.47%), Postives = 184/272 (67.65%), Query Frame = 1 
Query:   16 GPVGHGRVTCISIYGGPELDFG---EGPGKILWVDNLGAAAGTLEEFLPFFASEKHKKVWHNYGFDRHVMFNSPDNREEQRIDCVGFAGDTMHMARLWDTSMEKYTGDTGFSLEALSLKLLGEGQRKTPMKELFGIPKLKKDGTPGNLLVLPPIDEIQTRPEVRPRFIEYSAYDAQATWLVHRELMQKLREMPWKDELTMLDFYETYYVPFGELLTDMERTGIYVEAKGYLKDIEVQARNDKKKAEETFLSWV-KKIQPGAETLNPSSSTQI 819
            GPVG+G V+C SIY GP+ D+G   +GPG +LW+DNL  A G L+EF  FF  E+ K VWHN+GFDRHVM+N       + ID  GF GDTMHMARL DTS  KY    G+ LEAL+  +L   +RK PMKE+FG+P+L+KDGTPG+L+ +PP++ +Q  P  R ++I YSAYDA+ TWL+  EL   L +MPW D   + D+Y+ +   FG++LTDMER GI V+AK YL  +EVQAR D+K   E F  W  + I      +NP+SSTQ+
Sbjct:  236 GPVGNGFVSCASIYSGPDFDYGLGDDGPGTVLWIDNLDEAFGVLQEFKEFFEDERFKTVWHNFGFDRHVMWN-------EGIDVKGFGGDTMHMARLQDTSRAKYGAGMGYGLEALTNSILE--RRKKPMKEIFGVPRLRKDGTPGSLVDVPPVEVLQRDPRFRVQWIIYSAYDAEGTWLLREELKYMLEDMPWFDGQNLYDYYQLHMRNFGKVLTDMERRGIRVDAKDYLAGVEVQAREDRKGHVEAFHKWAFEMIGVDGLAINPASSTQL 498
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BLAST of mRNA_E-fasciculatus_F_contig14422.3218.1 vs. uniprot
Match: A0A7S3QHS2_9STRA (Hypothetical protein n=3 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QHS2_9STRA)

HSP 1 Score: 278 bits (712), Expect = 6.130e-83
Identity = 140/272 (51.47%), Postives = 184/272 (67.65%), Query Frame = 1 
Query:   16 GPVGHGRVTCISIYGGPELDFG---EGPGKILWVDNLGAAAGTLEEFLPFFASEKHKKVWHNYGFDRHVMFNSPDNREEQRIDCVGFAGDTMHMARLWDTSMEKYTGDTGFSLEALSLKLLGEGQRKTPMKELFGIPKLKKDGTPGNLLVLPPIDEIQTRPEVRPRFIEYSAYDAQATWLVHRELMQKLREMPWKDELTMLDFYETYYVPFGELLTDMERTGIYVEAKGYLKDIEVQARNDKKKAEETFLSWV-KKIQPGAETLNPSSSTQI 819
            GPVG+G V+C SIY GP+ D+G   +GPG +LW+DNL  A G L+EF  FF  E+ K VWHN+GFDRHVM+N       + ID  GF GDTMHMARL DTS  KY    G+ LEAL+  +L   +RK PMKE+FG+P+L+KDGTPG+L+ +PP++ +Q  P  R ++I YSAYDA+ TWL+  EL   L +MPW D   + D+Y+ +   FG++LTDMER GI V+AK YL  +EVQAR D+K   E F  W  + I      +NP+SSTQ+
Sbjct:  234 GPVGNGFVSCASIYSGPDFDYGLGDDGPGTVLWIDNLDEAFGVLQEFKEFFEDERFKTVWHNFGFDRHVMWN-------EGIDVKGFGGDTMHMARLQDTSRAKYGAGMGYGLEALTNSILE--RRKKPMKEIFGVPRLRKDGTPGSLVDVPPVEVLQRDPRFRVQWIIYSAYDAEGTWLLREELQYMLEDMPWFDGQNLYDYYQLHMRNFGKVLTDMERRGIRVDAKDYLAGVEVQAREDRKGHVEAFHKWAFEMIGVDGLAINPASSTQL 496
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BLAST of mRNA_E-fasciculatus_F_contig14422.3218.1 vs. uniprot
Match: A0A8J9TD99_PHATR (Hypothetical protein (Fragment) n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9TD99_PHATR)

HSP 1 Score: 261 bits (667), Expect = 8.210e-83
Identity = 135/272 (49.63%), Postives = 177/272 (65.07%), Query Frame = 1 
Query:   16 GPVGHGRVTCISIYGGPELDFG--EGPGKILWVDNLGAAAGTLEEFLPFFASEKHKKVWHNYGFDRHVMFNSPDNREEQRIDCVGFAGDTMHMARLWDTSMEKYTGDTGFSLEALSLKLLGEGQRKTPMKELFGIPKLKKDGTPGNLLVLPPIDEIQTRPEVRPRFIEYSAYDAQATWLVHRELMQKLREMPWKDELTMLDFYETYYVPFGELLTDMERTGIYVEAKGYLKDIEVQARNDKKKAEETFLSWV-KKIQPGAETLNPSSSTQIQ 822
            GPVG+G VTC S+Y GP+ D+G  EGPG  LW+DNL  AAG L+EF  +F + +  KVWHNYGFDRHVM+N       + ID  G  GDTMHMARL DT   K     G+SLEAL+  LL   +RK PMKELFG+ +L+KDG+ G L+ +PP++ +Q  PE R  +I+YS YDA+ TWL+  EL ++L+  PW     + D+Y  +  PF E+LTDMER G+ V AK YL ++E +AR D+    + F  W   KI P    LN SS+TQ+Q
Sbjct:   41 GPVGNGYVTCASVYSGPDFDYGLGEGPGSCLWIDNLDDAAGILQEFKAWFENPRFLKVWHNYGFDRHVMWN-------EGIDVQGLGGDTMHMARLQDTCRSKMAKGGGYSLEALTADLLS--RRKQPMKELFGVHRLRKDGSEGALVDIPPVESMQRDPESRSMWIKYSCYDAEGTWLLREELEKRLKMKPWIGNKNLWDYYFLHMRPFAEVLTDMERRGVRVNAKDYLFNVERKAREDRVHHSKIFREWAASKIGPDGLALNLSSATQLQ 303
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BLAST of mRNA_E-fasciculatus_F_contig14422.3218.1 vs. uniprot
Match: A0A1V9ZPL5_9STRA (DNA polymerase I n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZPL5_9STRA)

HSP 1 Score: 271 bits (692), Expect = 5.540e-82
Identity = 141/274 (51.46%), Postives = 184/274 (67.15%), Query Frame = 1 
Query:   16 GPVGHGRVTCISIYGGPELDFGEGPGKILWVDNLGAAAGTLEEFLPFFASEKHKKVWHNYGFDRHVMFNSPDNREEQRIDCVGFAGDTMHMARLWDTSMEKYTGDTGFSLEALSLKLLGEGQRKTPMKELFGIPKLKKDGTPGNLLVLPPIDEIQTRPEVRPRFIEYSAYDAQATWLVHRELMQKLREMPWKDEL-----TMLDFYETYYVPFGELLTDMERTGIYVEAKGYLKDIEVQARNDKKKAEETFLSWVKKIQPGAETLNPSSSTQIQ 822
            GPVG+G VTC+SIY GP++DFG GP   +WVDNL AA GTLE F  F  S+  KK+WHNY FDRHV+FN P      RID  G  GDTMHMARLW+T+  +     G+SLEALS  L+    RK PMKELFG+PKLKKDG+ G  L+LPP++++Q  PE R R+I YSAYDA+ TW +H+ L QKL +  W         TM +FY+ Y VPFGE LTD+ER G++V+ + +L  +E +A  ++K+ E++ L W K+  P A  +N  S+ Q Q
Sbjct:   78 GPVGNGVVTCLSIYSGPDVDFGNGP--YVWVDNLDAAEGTLEYFRDFLESKTIKKIWHNYSFDRHVLFNKPT-----RIDVQGLGGDTMHMARLWNTARFQ---KGGYSLEALSADLMHA--RKKPMKELFGVPKLKKDGSAGKELLLPPVEDLQRFPEFRERWIRYSAYDAECTWFLHQVLKQKLDDTLWHHSSIDGRHTMYEFYQKYIVPFGECLTDIERKGMHVD-RAFLATVEARALEERKQLEDSVLDWAKRYVPEAHRMNIYSAAQKQ 338
[Close]
BLAST of mRNA_E-fasciculatus_F_contig14422.3218.1 vs. uniprot
Match: A0A7S2SQU9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQU9_9STRA)

HSP 1 Score: 265 bits (676), Expect = 7.470e-82
Identity = 137/274 (50.00%), Postives = 183/274 (66.79%), Query Frame = 1 
Query:   16 GPVGHGRVTCISIYGGPELDFGEGPGKILWVDNLGAAAGTLEEFLPFFASEKHKKVWHNYGFDRHVMFNSPDNREEQRIDCVGFAGDTMHMARLWDTSMEKYTGD-TGFSLEALSLKLLGEGQRKTPMKELFGIPKLKKDGTPGNLLVLPPIDEIQTR---PEVRPRFIEYSAYDAQATWLVHRELMQKLREMPWKDELTMLDFYETYYVPFGELLTDMERTGIYVEAKGYLKDIEVQARNDKKKAEETFLSWVKKIQ-PGAETLNPSSSTQIQ 822
            GPVG+G VTC+SI+ GP+ D+G+GPG+ LWVDNL  A G L+EF  +F  +   K WHNYGFDRHV+ N       + ID  GF  DTMHMARL D+S +K TG+  G+SLEAL+  +L   +RK  MK++FG+ K +KDGTP ++ V+PPI+++Q     P  R  FI YSAYDA+ TW + + L  +LR   W+   +M+DFY  Y+VPFGE LTDMER G++V A  YL  +E QA  DK++    F SWV ++  P  + LNPSSS Q+Q
Sbjct:  197 GPVGNGHVTCVSIFSGPDADYGDGPGRALWVDNLDEADGVLQEFKAWFEDQSQYKAWHNYGFDRHVLHN-------EGIDARGFVADTMHMARLEDSSRDKRTGEGAGYSLEALTTDMLQ--RRKVSMKDIFGVGKPRKDGTPSSVKVVPPIEDLQRGVQDPRHRWDFIRYSAYDAEGTWHLFKALEARLRAKSWETSYSMMDFYSRYFVPFGETLTDMERRGVWVNA-AYLAGLERQATEDKERLLGEFRSWVMEVAGPDGKYLNPSSSVQMQ 460
[Close]
BLAST of mRNA_E-fasciculatus_F_contig14422.3218.1 vs. uniprot
Match: A0A7S3QHS3_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QHS3_9STRA)

HSP 1 Score: 262 bits (669), Expect = 1.480e-81
Identity = 130/244 (53.28%), Postives = 170/244 (69.67%), Query Frame = 1 
Query:   16 GPVGHGRVTCISIYGGPELDFG---EGPGKILWVDNLGAAAGTLEEFLPFFASEKHKKVWHNYGFDRHVMFNSPDNREEQRIDCVGFAGDTMHMARLWDTSMEKYTGDTGFSLEALSLKLLGEGQRKTPMKELFGIPKLKKDGTPGNLLVLPPIDEIQTRPEVRPRFIEYSAYDAQATWLVHRELMQKLREMP-WKDELTMLDFYETYYVPFGELLTDMERTGIYVEAKGYLKDIEVQARNDKK 735
            GPVG+G V+C SIY GP+ D+G   +GPG +LW+DNL  A G L+EF  FF  E+ K VWHN+GFDRHVM+N       + ID  GF GDTMHMARL DTS  KY    G+ LEAL+  +L   +RK PMKE+FG+P+L+KDGTPG+L+ +PP++ +Q  P  R ++I YSAYDA+ TWL+  EL   L +MP W D   + D+Y+ +   FG++LTDMER GI V+AK YL  +EVQAR D+K
Sbjct:  234 GPVGNGFVSCASIYSGPDFDYGLGDDGPGTVLWIDNLDEAFGVLQEFKEFFEDERFKTVWHNFGFDRHVMWN-------EGIDVKGFGGDTMHMARLQDTSRAKYGAGMGYGLEALTNSILE--RRKKPMKEIFGVPRLRKDGTPGSLVDVPPVEVLQRDPRFRVQWIIYSAYDAEGTWLLREELQYMLEDMPAWFDGQNLYDYYQLHMRNFGKVLTDMERRGIRVDAKDYLAGVEVQAREDRK 468
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14422.3218.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K9D2_9PHAE6.440e-18397.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMQ5_ECTSI2.400e-18196.32Pol1-like DNA polymerase n=1 Tax=Ectocarpus silicu... [more]
A0A7S1XY06_9STRA2.610e-10355.43Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S2K5E3_9STRA3.810e-8752.40Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A7S3QI54_9STRA5.920e-8651.47Hypothetical protein (Fragment) n=1 Tax=Chaetocero... [more]
A0A7S3QHS2_9STRA6.130e-8351.47Hypothetical protein n=3 Tax=Chaetoceros debilis T... [more]
A0A8J9TD99_PHATR8.210e-8349.63Hypothetical protein (Fragment) n=3 Tax=Phaeodacty... [more]
A0A1V9ZPL5_9STRA5.540e-8251.46DNA polymerase I n=1 Tax=Achlya hypogyna TaxID=120... [more]
A0A7S2SQU9_9STRA7.470e-8250.00Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S3QHS3_9STRA1.480e-8153.28Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14422contigE-fasciculatus_F_contig14422:6..2914 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score551.2
Seed ortholog evalue2.7e-154
Seed eggNOG ortholog2880.D8LMQ5
KEGG rclassRC02795
KEGG koko:K02335
KEGG ReactionR00375,R00376,R00377,R00378
KEGG Pathwayko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440
GOsGO:0000002,GO:0003674,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006264,GO:0006725,GO:0006807,GO:0006996,GO:0007005,GO:0008150,GO:0008152,GO:0008409,GO:0009058,GO:0009059,GO:0009507,GO:0009536,GO:0009657,GO:0009987,GO:0016043,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0032042,GO:0033258,GO:0033259,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0071897,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901362,GO:1901576
EggNOG free text desc.plastid DNA replication
EggNOG OGsCOG0749@1,KOG0950@2759
EC2.7.7.7
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03032,ko03400
Hectar predicted targeting categoryother localisation
Exons6
Model size822
Cds size822
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14422.3218.1prot_E-fasciculatus_F_contig14422.3218.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig14422 6..2914 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927930.6329806-CDS-E-fasciculatus_F_contig14422:5..1851622927930.6329806-CDS-E-fasciculatus_F_contig14422:5..185Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14422 6..185 +
1695995755.6200812-CDS-E-fasciculatus_F_contig14422:5..1851695995755.6200812-CDS-E-fasciculatus_F_contig14422:5..185Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14422 6..185 +
1622927930.6496727-CDS-E-fasciculatus_F_contig14422:385..5751622927930.6496727-CDS-E-fasciculatus_F_contig14422:385..575Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14422 386..575 +
1695995755.6354022-CDS-E-fasciculatus_F_contig14422:385..5751695995755.6354022-CDS-E-fasciculatus_F_contig14422:385..575Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14422 386..575 +
1622927930.672193-CDS-E-fasciculatus_F_contig14422:868..10321622927930.672193-CDS-E-fasciculatus_F_contig14422:868..1032Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14422 869..1032 +
1695995755.6459303-CDS-E-fasciculatus_F_contig14422:868..10321695995755.6459303-CDS-E-fasciculatus_F_contig14422:868..1032Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14422 869..1032 +
1622927930.6905143-CDS-E-fasciculatus_F_contig14422:1689..18201622927930.6905143-CDS-E-fasciculatus_F_contig14422:1689..1820Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14422 1690..1820 +
1695995755.656866-CDS-E-fasciculatus_F_contig14422:1689..18201695995755.656866-CDS-E-fasciculatus_F_contig14422:1689..1820Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14422 1690..1820 +
1622927930.7134483-CDS-E-fasciculatus_F_contig14422:2105..21841622927930.7134483-CDS-E-fasciculatus_F_contig14422:2105..2184Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14422 2106..2184 +
1695995755.6744213-CDS-E-fasciculatus_F_contig14422:2105..21841695995755.6744213-CDS-E-fasciculatus_F_contig14422:2105..2184Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14422 2106..2184 +
1622927930.7360938-CDS-E-fasciculatus_F_contig14422:2836..29141622927930.7360938-CDS-E-fasciculatus_F_contig14422:2836..2914Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14422 2837..2914 +
1695995755.690803-CDS-E-fasciculatus_F_contig14422:2836..29141695995755.690803-CDS-E-fasciculatus_F_contig14422:2836..2914Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14422 2837..2914 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig14422.3218.1

>prot_E-fasciculatus_F_contig14422.3218.1 ID=prot_E-fasciculatus_F_contig14422.3218.1|Name=mRNA_E-fasciculatus_F_contig14422.3218.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=274bp
MKQDHGPVGHGRVTCISIYGGPELDFGEGPGKILWVDNLGAAAGTLEEFL
PFFASEKHKKVWHNYGFDRHVMFNSPDNREEQRIDCVGFAGDTMHMARLW
DTSMEKYTGDTGFSLEALSLKLLGEGQRKTPMKELFGIPKLKKDGTPGNL
LVLPPIDEIQTRPEVRPRFIEYSAYDAQATWLVHRELMQKLREMPWKDEL
TMLDFYETYYVPFGELLTDMERTGIYVEAKGYLKDIEVQARNDKKKAEET
FLSWVKKIQPGAETLNPSSSTQIQ
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mRNA from alignment at E-fasciculatus_F_contig14422:6..2914+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig14422.3218.1 ID=mRNA_E-fasciculatus_F_contig14422.3218.1|Name=mRNA_E-fasciculatus_F_contig14422.3218.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2909bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14422:6..2914+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGAAACAGGACCATGGCCCCGTCGGCCACGGGCGTGTGACGTGCATCTC
GATCTACGGGGGTCCGGAGCTGGACTTCGGAGAAGGTCCCGGCAAGATCT
TGTGGGTGGACAACCTGGGGGCGGCGGCGGGGACACTGGAGGAGTTCCTA
CCCTTCTTCGCGAGCGAGAAGCACAAGAAGGTACTTGTATTTGGCATTTA
AAGGCGTGCATGTGCTTGCGCTGGCCCCCGCTGCAGTAGTCGCCAAAGGT
ATTAATTATTTTTGTAGGCGTGTGTGCGTGTTTGTTTGTGCTGGCACCTT
GCAGCAGTCGCCGTGCACACAGATGAGCGAGCATCAAGTAATCCCCCCCC
CCGGCTGTCTCCTCTCCTCGGACCCCCCAGGTGTGGCACAACTACGGTTT
CGACAGGCACGTCATGTTCAATTCGCCGGACAACCGGGAGGAGCAAAGGA
TCGACTGCGTCGGGTTCGCCGGAGACACGATGCACATGGCCAGGCTGTGG
GACACGAGCATGGAGAAGTACACCGGGGACACCGGCTTTTCCCTCGAAGC
CTTGTCTCTCAAGCTCCTCGGTGAGTCCACGACAACCATCCCTCCGCATA
CGCGCCACGTGTAGCACAGCACCCCGTTCGCATCTGAAACAAACCCCACC
CCGTCCCTCGGTCTCGTGAGAGACGCAGGCGTAGTCAAATGGTAGAATGA
TTCAGGCAAGCAACAGCTATTGTACTATTGTGCCCCCTCCCCCGCCTCTC
GAGGGCGAGTGGTCAACGGTCTAACAACCAAGGCACGCAAAACCTGAGCA
TGCCCCCCCCTTCCCACCCTGAATGTGTTTCCTCTGGTGATTTTTGTTGT
TTTCGCGCGGCAGGGGAGGGGCAGCGGAAGACGCCCATGAAGGAGCTGTT
CGGCATCCCGAAGCTCAAGAAGGACGGCACGCCGGGTAACCTTCTGGTGC
TGCCGCCGATCGACGAGATACAGACGAGGCCGGAGGTTAGACCCAGGTTC
ATCGAGTACTCGGCCTACGACGCTCAGGTGTGGTGTGGTGCGGTGTGATG
TGATCCATGGGGGAGTAGAAGAGAACACGGTAACGGTGTGATTGGTATCT
ACGGAGTTGAGTGTAGGAAGTTGGGAGGGAAGGAAGTTGAGCTGCCGAGA
GAAAGGAGAGGGTGGGGAATGGAATCGTGGGAGGGCAGAAAAGGAGGGGG
AGGGAGCAGGGGGGGAGCAAGGGTAGGAGGAGATACCAAGAGAGGGGGGC
GGGGCGGGTTGAAAGAGCCGAGAGATAGACAGAGACAGACTAACAGCGAA
GCAGAGAGCAGCTGACAATAGTTCTCAAACCTCACGGCAAAAGCTAACTT
TGAGCACGCCGTGCCTCTCTCATGCTTTGAAAGCAGTGGCAGTTGAAAGC
TCTTGTTGCGTATTTTGCATTTGTTTGCGGACACTCGGCTAACCGCGCAA
GATCGCACAAAATATCCCAGTTGTTTTTGGTGAGATGAATCACGGAGATG
GTGCGCGAGCACGCAAGAGACGTGCCAGCGTTGTCGCTCATTGCCTTGAC
TCTTTGCTGCCCTTCGCCGAGTGCCTAGCATGTTTGAAGAACTCTTTGCA
ACAAGGAGAAAGGACAGACACGTTTGAGTACTACCGTTTACGTTGTTGTT
CATCGAAAAGAGCTGCTTCTACGTGCCCCCCCAGGCGACGTGGCTTGTGC
ACCGCGAGCTGATGCAGAAGCTGAGGGAGATGCCGTGGAAGGACGAGCTG
ACCATGCTGGACTTCTACGAGACGTACTATGTGCCCTTTGGGGAACTGCT
GACCGACATGGAGAGGTGCGTACGCTAGCCAGACGCCTTGCATTCTCTCA
TTGTAGCTGTCGTTGTTGTTGTTGCCGTTGTTGATGCTGGTGTTGTTGTT
GTTGTTGTTGTTGTTGTTGTTGTTGTTGTCATTGCCGTTGTTGCTACAGG
GTGCATAGGTGGGAAGTTCTAATCGATTGCTCTACGTGTATTTACGTTTC
AAGGCGACGAGCTCTGGACCTCGAAAATCTGCTTCCTCTCTGAACTCTTG
CGTGCTTTGCTGGGTATTTTGTGTTGTGTGTGTGTCTTGTCTTTGTTTAG
GACCGGGATCTACGTTGAGGCGAAGGGTTACCTGAAGGACATCGAGGTGC
AGGCCAGAAACGACAAGAAGAAAGCCGAGGTACGGATGAATGTAGTGTGC
ATGGTGCACGACGATGCACATAAGAGATGACGAAATGACGACACCATGCG
AGTAACCATGTTCAACGACAGGAAAAGCCGACATACGCGTACGTAATGTC
GCACGAATAACGAAGAGATGACGAGACAACGCCGCTATGGGGGAAAACCT
CTTGAACGACCAGAAAAGCCGACGTAGACGTACGTAATGACGCACGAGTA
ACGAAGAGATACTAGATATCGCCACTACTGCTGTGTGGGAATACCTCTTC
GTTTTGGCCAGGAGCTTTAGGGAGAACGCCGAGGCGTAAACGCACGATAT
ACAGAGATTGGCGCCACCGTGTGGGATAACCTCCTGACGCTTTTGTCCGA
GGCTGGCCTTCCTCTTTGCATTGGGGGAGGTCAAGGTCAAGTATTACCGA
CAGCGACTCTTTACACGCATAGCATACATACTTTTAGGACATACTTTTAG
GTGGATTTTTTTTGGGGGGGGAGCGCTCTCCACCGGATGTCACTATTAAT
AATATCCGTGACGCTACTGCTGTTTGTCTTTATGTTGTTTTTTTGTCGTT
TGCTTGACGGTCTGACTTCTCTCGGTGGTGCCTGTCGGGCGTGTCGGTGT
TACCGTCGTGGGATTTCCTTGCCTCGAGCAGGAGACATTCCTGAGCTGGG
TGAAGAAGATACAGCCTGGCGCGGAGACCCTCAACCCGTCGTCAAGCACA
CAGATTCAG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14422:6..2914+

>mRNA_E-fasciculatus_F_contig14422.3218.1 ID=mRNA_E-fasciculatus_F_contig14422.3218.1|Name=mRNA_E-fasciculatus_F_contig14422.3218.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1644bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14422:6..2914+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGAAACAGGACCATGGCCCCGTCGGCCACGGGCGTGTGACGTGCATCTC
GATCTACGGGGGTCCGGAGCTGGACTTCGGAGAAGGTCCCGGCAAGATCT
TGTGGGTGGACAACCTGGGGGCGGCGGCGGGGACACTGGAGGAGTTCCTA
CCCTTCTTCGCGAGCGAGAAGCACAAGAAGATGAAACAGGACCATGGCCC
CGTCGGCCACGGGCGTGTGACGTGCATCTCGATCTACGGGGGTCCGGAGC
TGGACTTCGGAGAAGGTCCCGGCAAGATCTTGTGGGTGGACAACCTGGGG
GCGGCGGCGGGGACACTGGAGGAGTTCCTACCCTTCTTCGCGAGCGAGAA
GCACAAGAAGGTGTGGCACAACTACGGTTTCGACAGGCACGTCATGTTCA
ATTCGCCGGACAACCGGGAGGAGCAAAGGATCGACTGCGTCGGGTTCGCC
GGAGACACGATGCACATGGCCAGGCTGTGGGACACGAGCATGGAGAAGTA
CACCGGGGACACCGGCTTTTCCCTCGAAGCCTTGTCTCTCAAGCTCCTCG
GTGTGGCACAACTACGGTTTCGACAGGCACGTCATGTTCAATTCGCCGGA
CAACCGGGAGGAGCAAAGGATCGACTGCGTCGGGTTCGCCGGAGACACGA
TGCACATGGCCAGGCTGTGGGACACGAGCATGGAGAAGTACACCGGGGAC
ACCGGCTTTTCCCTCGAAGCCTTGTCTCTCAAGCTCCTCGGGGAGGGGCA
GCGGAAGACGCCCATGAAGGAGCTGTTCGGCATCCCGAAGCTCAAGAAGG
ACGGCACGCCGGGTAACCTTCTGGTGCTGCCGCCGATCGACGAGATACAG
ACGAGGCCGGAGGTTAGACCCAGGTTCATCGAGTACTCGGCCTACGACGC
TCAGGGGAGGGGCAGCGGAAGACGCCCATGAAGGAGCTGTTCGGCATCCC
GAAGCTCAAGAAGGACGGCACGCCGGGTAACCTTCTGGTGCTGCCGCCGA
TCGACGAGATACAGACGAGGCCGGAGGTTAGACCCAGGTTCATCGAGTAC
TCGGCCTACGACGCTCAGGCGACGTGGCTTGTGCACCGCGAGCTGATGCA
GAAGCTGAGGGAGATGCCGTGGAAGGACGAGCTGACCATGCTGGACTTCT
ACGAGACGTACTATGTGCCCTTTGGGGAACTGCTGACCGACATGGAGAGG
CGACGTGGCTTGTGCACCGCGAGCTGATGCAGAAGCTGAGGGAGATGCCG
TGGAAGGACGAGCTGACCATGCTGGACTTCTACGAGACGTACTATGTGCC
CTTTGGGGAACTGCTGACCGACATGGAGAGGACCGGGATCTACGTTGAGG
CGAAGGGTTACCTGAAGGACATCGAGGTGCAGGCCAGAAACGACAAGAAG
AAAGCCGAGGACCGGGATCTACGTTGAGGCGAAGGGTTACCTGAAGGACA
TCGAGGTGCAGGCCAGAAACGACAAGAAGAAAGCCGAGGAGACATTCCTG
AGCTGGGTGAAGAAGATACAGCCTGGCGCGGAGACCCTCAACCCGTCGTC
AAGCACACAGATTCAGGAGACATTCCTGAGCTGGGTGAAGAAGATACAGC
CTGGCGCGGAGACCCTCAACCCGTCGTCAAGCACACAGATTCAG
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