prot_E-fasciculatus_F_contig14416.3212.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14416.3212.1
Unique Nameprot_E-fasciculatus_F_contig14416.3212.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length207
Homology
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BLAST of mRNA_E-fasciculatus_F_contig14416.3212.1 vs. uniprot
Match: D8LBS1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBS1_ECTSI)

HSP 1 Score: 224 bits (572), Expect = 1.860e-71
Identity = 181/206 (87.86%), Postives = 185/206 (89.81%), Query Frame = 0 
Query:    1 MQEDQDFEEDDGDELSAMAWESAIRGKSGREIAQLHESWAAAFLSRGSFNKAQEHLDHALEAWTGYDEPGLQARAWCLKASCSGEAGDFSAAAASSKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAHGVRAVSYQMTGNFLAACNEHEAAAKLAEQRQALPLAPALALGMETNFGIR 206
            MQE QDFEEDD  ELSAMAWESAIRGKSGREIA LH+SWAAAFL+RGSFNKAQEHLDHALEAWTGYDEPGLQARAWCLKASCSGEAGD          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    +RA+SYQMTGNFLAACNEHEAAAKLAEQRQ  PLAPA ALGMETNFGIR
Sbjct:    1 MQEHQDFEEDDDGELSAMAWESAIRGKSGREIAHLHQSWAAAFLARGSFNKAQEHLDHALEAWTGYDEPGLQARAWCLKASCSGEAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRAMSYQMTGNFLAACNEHEAAAKLAEQRQVHPLAPAFALGMETNFGIR 206
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14416.3212.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LBS1_ECTSI1.860e-7187.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 13..202
e-value: 1.4E-13
score: 52.6
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 27..185

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14416contigE-fasciculatus_F_contig14416:257..1424 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14416.3212.1mRNA_E-fasciculatus_F_contig14416.3212.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14416 257..1424 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14416.3212.1 ID=prot_E-fasciculatus_F_contig14416.3212.1|Name=mRNA_E-fasciculatus_F_contig14416.3212.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=207bp
MQEDQDFEEDDGDELSAMAWESAIRGKSGREIAQLHESWAAAFLSRGSFN
KAQEHLDHALEAWTGYDEPGLQARAWCLKASCSGEAGDFSAAAASSKIAL
KIAEGTDDAPLVLSVMANRAICEIHLGDCKAAATRSRRAFIRAEAEGRPE
AVLLAHGVRAVSYQMTGNFLAACNEHEAAAKLAEQRQALPLAPALALGME
TNFGIR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf