mRNA_E-fasciculatus_F_contig14409.3208.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14409.3208.1 vs. uniprot
Match: D8LEN7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEN7_ECTSI) HSP 1 Score: 374 bits (961), Expect = 8.950e-121 Identity = 251/334 (75.15%), Postives = 258/334 (77.25%), Query Frame = 1
Query: 16 RDLEGVVDALKRVTDKLRGENDRLRRMAGEGGGKAEAERSAREAKKKAAALREEVDRLTARAKDADSAVQKLAQKQDLVNQLRRTLKVRDAAIKTFQERAEDLAETKTLLSAELEAANQRLVASDRDSRSSGRSRPPPPSAA-DTARELEDAKREAATLRQQ---------------------------------------------------------------RMERRCASAMSAASRGGDGAADSVDGGRKELLRMSGTGGLGSRGDGEGRLTQDGRLKNENDXXXXXXXXXXXXLGAFDHEFFEEIEDLKYKYSEAVRKLRQYEHERIGG 825
RDLEGVVDALKRVTDKLRGENDRLRRMAGEGGGKAEAERSAREAKKKAAALREEVD+LTARAKDADSAVQKLAQKQ+LVNQLRRTLKVRDA IKTFQERAEDLAETKTLLSAELEAANQRLVASDRDSRSSGRSRPP +AA TARELEDAKREAATLRQQ RMERRCASAMS ASRGG+GAADS D G K+LLR+SGTGGLGSRGDGEGRLTQD RLK EN XXXXXXXXXXXXLGAFDHEFFEEIEDLKYKYSEAVRKLRQ+E ERIGG
Sbjct: 540 RDLEGVVDALKRVTDKLRGENDRLRRMAGEGGGKAEAERSAREAKKKAAALREEVDKLTARAKDADSAVQKLAQKQELVNQLRRTLKVRDATIKTFQERAEDLAETKTLLSAELEAANQRLVASDRDSRSSGRSRPPAAAAAAHTARELEDAKREAATLRQQVQHQSEVVDRLRGDMNRDREETAAAAAGPGSEAVEAARAPAESAQDEADELRDRLAETERELQRMERRCASAMSTASRGGEGAADSFDRGSKDLLRVSGTGGLGSRGDGEGRLTQD-RLKKENXXXXXXXXXXXXXLGAFDHEFFEEIEDLKYKYSEAVRKLRQFEQERIGG 872
BLAST of mRNA_E-fasciculatus_F_contig14409.3208.1 vs. uniprot
Match: A0A6H5KTB3_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTB3_9PHAE) HSP 1 Score: 362 bits (928), Expect = 6.620e-111 Identity = 244/334 (73.05%), Postives = 251/334 (75.15%), Query Frame = 1
Query: 16 RDLEGVVDALKRVTDKLRGENDRLRRMAGEGGGKAEAERSAREAKKKAAALREEVDRLTARAKDADSAVQKLAQKQDLVNQLRRTLKVRDAAIKTFQERAEDLAETKTLLSAELEAANQRLVASDRDSRSSGRSRPPPPSA--ADTARELEDAKREAATLRQQ--------------------------------------------------------------RMERRCASAMSAASRGGDGAADSVDGGRKELLRMSGTGGLGSRGDGEGRLTQDGRLKNENDXXXXXXXXXXXXLGAFDHEFFEEIEDLKYKYSEAVRKLRQYEHERIGG 825
RDLEGVVDALKRVTDKLRGENDRLRRMAGEGGGKAEA+RSAREAKKKAA LREEVDRLTARAKDADSAVQKLAQKQDLVNQLRRTLKVRDA IKTFQ+RAEDLAE KTLLSAELEAANQRLVASDRDSRSS RSRP A TARELEDAKREAATLRQQ RMERRCASAMS ASRGG+GAADS DGG K+LLR+SGTGGLGSRGDGEGRLTQD RL+ EN XXXXXXXXXXX LGAFDHEFFEEIEDLKYKYSEAVRKLR +E ERIGG
Sbjct: 2246 RDLEGVVDALKRVTDKLRGENDRLRRMAGEGGGKAEAQRSAREAKKKAAELREEVDRLTARAKDADSAVQKLAQKQDLVNQLRRTLKVRDATIKTFQDRAEDLAEAKTLLSAELEAANQRLVASDRDSRSSCRSRPXXXXXXXAHTARELEDAKREAATLRQQVQHQSEVVDRLRGDMNRDREETAAAVGPGSEALEAARAAXXXXXXXXXXXXDRLAETERELQRMERRCASAMSTASRGGEGAADSFDGGSKDLLRVSGTGGLGSRGDGEGRLTQD-RLREENXXXXXXXXXXXXELGAFDHEFFEEIEDLKYKYSEAVRKLRHFEQERIGG 2578
BLAST of mRNA_E-fasciculatus_F_contig14409.3208.1 vs. uniprot
Match: A0A7S1UJF9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJF9_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 2.800e-15 Identity = 60/134 (44.78%), Postives = 84/134 (62.69%), Query Frame = 1
Query: 16 RDLEGVVDALKRVTDKLRGENDRLRRMAGEGGGKAEAERSAREAKKKAAALREEVDRLTARAKDADSAVQKLAQKQDLVNQLRRTLKVRDAAIKTFQERAEDLAETKTLLSAELEAANQRLVASDRDSRSSGRS 417
RDLEGVVDALKRV DKL+ EN+RLRR A E +EAER AR+A+ + A L+ E+ L RA + A Q+LA K + QLRR +K RD +K +++ ++L T+ L AN+R++ +R + S RS
Sbjct: 270 RDLEGVVDALKRVVDKLKSENERLRRGAAESTKVSEAERRARDARGRVAELQAELTALRTRAAAGEEASQRLASKTEQSAQLRRAIKRRDGELKDLRDKVDELERTRQNLEEAANNANKRVLQLERRADGSRRS 403
BLAST of mRNA_E-fasciculatus_F_contig14409.3208.1 vs. uniprot
Match: A0A7S3XY01_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XY01_HETAK) HSP 1 Score: 79.7 bits (195), Expect = 8.380e-14 Identity = 93/273 (34.07%), Postives = 136/273 (49.82%), Query Frame = 1
Query: 16 RDLEGVVDALKRVTDKLRGENDRLRRMAGEGGGKAEAERSAREAKKKAAALREEVDRLTARAKDADSAVQKLAQKQDLVNQLRRTLKVRDAAIKTFQERAEDLAETKTLLSAELEAANQRLVASDRDSRSSGRSRPPPPSAADTARELEDAKREAATLRQQRMERRCASAMSAASRGGDGAADSVDGGRK---ELLRMSGTGGLGSRGDGEG-----RLTQDGRLKNENDXXXXXXXXXXXXLGAFDHEFFEEIEDLKYKYSEAVRKLRQYEH 810
RDLEGVVD+L+RV +KL+ EN+RLRR AG+ A+A+ A Q+LAQ++D V LR+ ++ RD I++ Q++ ++K LLS ELE AN RL +++ + R R A +R L D + ATL Q+ E + A+ R A + +GG++ E R+ RG R ++ RL+ EN L AFD +FFEEIEDLK+KY+EA RKL+ Y++
Sbjct: 15 RDLEGVVDSLRRVIEKLKAENERLRRGAGDRAKVADADXXXXXXXXXXXXXXXXXXXXXXXXXXGGDASQRLAQQRDAVAHLRKQMRSRDKEIESLQKQITQQDQSKGLLSGELERANIRLQSANEEI---ARLRKGQSEQASASRMLSDNQ---ATLIQKNREIEELKGVVASLR--TKAQATGEGGQRWAAEKARLLDELAEARRGXXXXXXXXLREEENARLREEN-------AKLARELQAFDLDFFEEIEDLKFKYAEAQRKLQAYQN 272
BLAST of mRNA_E-fasciculatus_F_contig14409.3208.1 vs. uniprot
Match: A0A7S2SBL1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SBL1_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 9.030e-14 Identity = 95/288 (32.99%), Postives = 139/288 (48.26%), Query Frame = 1
Query: 16 RDLEGVVDALKRVTDKLRGENDRLRRMAGEGGGKAEAERSAREAKKKAAALREEVDRLTARAKDADSAVQKLAQKQDLVNQLRRTLKVRDAAIKTFQERAEDLAETKTLLSAEL------------EAANQRLVASDRDSRSSGRSRPPPPSAADTARELEDAKREAATLRQQRMERRCASAMSAASRGGDGAADSVDGGRKELLRMSGTGGLGSR-----GDGE-GRLTQDGRLKNENDXXXXXXXXXXXXLGAFDHEFFEEIEDLKYKYSEAVRKLRQYEHERIGG 825
RDLE VV+ L++V ++L+ EN+RL+ + + AER AR+AK +A LREE+ L RA A+ ++ KLAQ+ + V+QL+RT++ +D I+ + + R A R G+ R S A E++ K++ LR+Q A R + +AD D R+E+ R+ R D + G LT RL++EN L AFD +FFEEIEDLKYKY+EAV+KLRQ+E GG
Sbjct: 463 RDLESVVEGLQKVVNQLKRENERLKSGGADQTKLSAAERRARDAKSEATGLREELVSLRGRAATAEDSMSKLAQRNEQVSQLKRTIRQKDEEIQAHTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVDSIRAGAGSGPGRGDGKDRA---SLAQAQHEIDRLKQQ---LRRQGQATGGADTGPLQGRVNELSADLEDA-RREIQRLEDRARASERRTSSLSDADVGELT---RLRDEN-------AKLKQELSAFDLDFFEEIEDLKYKYAEAVKKLRQFEAASDGG 733
BLAST of mRNA_E-fasciculatus_F_contig14409.3208.1 vs. uniprot
Match: A0A7S2SL49_9STRA (Hypothetical protein n=2 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SL49_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 6.740e-9 Identity = 75/264 (28.41%), Postives = 122/264 (46.21%), Query Frame = 1
Query: 16 RDLEGVVDALKRVTDKLRGENDRLRRMAGEGGGKAEAERSAREAKKKAAALREEVDRLTARAKDADSAVQKLAQKQDLVNQLRRTLKVRDAAIKTFQERAEDLAETKTLLSAELEAANQRLV--ASDRDSRSSGRSRPPPPSAADTARELEDAKREAATLRQQRMERRCASAMSAASRGGDGAADSVDGGRKELLRMSGTGGLGSRGDGEGRLTQDGRLKNENDXXXXXXXXXXXXLGAFDHEFFEEIEDLKYKYSEAVRKLRQ 801
RDLE VV+++K+V KL+ EN+RL+R +E + +E +++ L + L+ R + A K+ + +D V L++ ++ RD A++ + + ++L L+ E+E ANQRL S D+ S RS+ ++D K +LR A ++SR +L+ T++ RL+ EN L AFD +FFEEIEDLKYKY +AV++ RQ
Sbjct: 2153 RDLENVVESMKKVVSKLQSENERLKRSTSGNARYSELGKRVKELERERDQLETSNEALSRRVQQNSEASTKVIRLEDAVKSLKKQIRSRDTALEKEKSKLDNLRAENARLTGEIEEANQRLTRGTSPSDTERSLRSK------------IQDQKNIIDSLR----------ASPSSSR--------------DLI------------------TENQRLERENQRLLNE-------LNAFDLDFFEEIEDLKYKYQQAVQENRQ 2355
BLAST of mRNA_E-fasciculatus_F_contig14409.3208.1 vs. uniprot
Match: A0A835Z7Q7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7Q7_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 8.950e-8 Identity = 44/86 (51.16%), Postives = 57/86 (66.28%), Query Frame = 1
Query: 16 RDLEGVVDALKRVTDKLRGENDRLRR--MAGEGGGKAEAERSAREAKKKAAALREEVDRLTARAKDADSAVQKLAQKQDLVNQLRR 267
RDLE VV+ALKRV +KLR ENDRL+R A GKA + R +++ L +EV L ARA AD + Q++AQ+QDL+ QLRR
Sbjct: 126 RDLETVVEALKRVVEKLRAENDRLKRGAAAATAQGKAGGSDAERRLRRQNEELAQEVAALKARAAAADQSSQQIAQRQDLIGQLRR 211
BLAST of mRNA_E-fasciculatus_F_contig14409.3208.1 vs. uniprot
Match: A0A2R5G9X9_9STRA (Centrosomal protein of 290 kDa n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G9X9_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 5.760e-6 Identity = 79/257 (30.74%), Postives = 115/257 (44.75%), Query Frame = 1
Query: 16 RDLEGVVDALKRVTDKLRGENDRLRRMAGEGGGKAEAERSAREAKKKAAALREEVDRLTARAKDADSAVQKLAQKQDLVNQLRRTLKVRDAAIKTFQERAEDLAETKTLLSAELEAANQRLVASDRDSRSSGRSRPPPPSAADTARELEDAKREAATLRQQRMERRCASAMSAASRGGDGAADSVDGGRKELLRMSGTGGLGSRGDGEGRLTQDGRLKNENDXXXXXXXXXXXXLGAFDHEFFEEIEDLKYKYSEAV 786
RDLE VV+++K+V KL+ EN+RL+R + ++ R K++ AL D L RA + K + QD V LRR + + ++ + RA L L EL+ A+ RL A P A +E++D +R+ Q R+ +SAA+ G GA +VD +E L E ++ RLKNE L AFD +FFEEIEDLKY+Y +A
Sbjct: 2236 RDLENVVESMKKVVSKLQAENERLKRTHTSSARYGDLQKQVRALKQENQALVSARDTLQDRAVKYSESSAKAIRLQDAVRGLRRQTRALETDVEKERARATALWSENQKLVEELQQASDRLSARV------------PRLEAGRDQEVDDLRRK--VREQTRVIDALRLEVSAATDLGPGAG-AVDEDAREAL--------------EDLRAENQRLKNE--------------LNAFDMDFFEEIEDLKYRYQQAT 2449 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14409.3208.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14409.3208.1 >prot_E-fasciculatus_F_contig14409.3208.1 ID=prot_E-fasciculatus_F_contig14409.3208.1|Name=mRNA_E-fasciculatus_F_contig14409.3208.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=276bp RRRLSRDLEGVVDALKRVTDKLRGENDRLRRMAGEGGGKAEAERSAREAKback to top mRNA from alignment at E-fasciculatus_F_contig14409:94..2595+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14409.3208.1 ID=mRNA_E-fasciculatus_F_contig14409.3208.1|Name=mRNA_E-fasciculatus_F_contig14409.3208.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2502bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14409:94..2595+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14409:94..2595+ >mRNA_E-fasciculatus_F_contig14409.3208.1 ID=mRNA_E-fasciculatus_F_contig14409.3208.1|Name=mRNA_E-fasciculatus_F_contig14409.3208.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1656bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14409:94..2595+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |