mRNA_E-fasciculatus_F_contig14401.3204.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14401.3204.1 vs. uniprot
Match: D7FZV3_ECTSI (Flagellar associated protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZV3_ECTSI) HSP 1 Score: 672 bits (1735), Expect = 3.930e-235 Identity = 378/490 (77.14%), Postives = 403/490 (82.24%), Query Frame = 1
Query: 1 QLQKRGACLGDGSIGPSGESEGVNSRERPGASPETGANESGAGG-SGSRGRHGGTVYRLAGMSEEERQQMLDLREELRREEVAIAAAQTLVGEMSEKLRRAEEERFRTLDLKRDLARVLALCHEDPLVGTNGERGLLAESGGTSFDRTGCLDAQPILVPNTSALLSPQDANGSELLPPTLLHSLDLSMGSSNDGRGETDNHGAGVGEGSVSTVLLPAIGPTRSSPQPQGWEPENNEHDQQRLPQWELQQHYLLSNQHEHVALEVPFRGADETEGNDAVGSSRGNNGRGMSGNLALWPEFTIVPKPAGGGRPPREGGDIVYNEEERKGEGATSCIDAKVLKAVARLLLSKLQISVEAITPRQASPRTKAVGFPSLTKRATLEDGGAGAESGVDLGDGQLRHSRKGPRRSRESTRTAKRYGASNGTSACSSRGQRRRGGR--------YEEGVSREGGRDHGVGRSRSGAPDDATSIWSGWHTTGIPSWDIL 1443
+LQKRGACL DGSIGP+ E V+ ERPGASPE G + + AG SGSRGRH GTVYRLAGMSEEERQQMLDLREELRREEVAIAAAQTLVGEMSE +RRAEEER R L LK DLARVLALCHEDPLVG NGE+GL ESGG SFDRTG LD QPI VP S LL QDANGSELLP TLLHS DL +GS+NDG G D+HG +GEGSVSTVLLPAIGPTR S QPQ WE ENNEHDQQR+PQ HEH+ALEVP RGAD TEG+DA+ SSRGN GM LALWPEFTIVP AG GRPPREGGDI Y+EE R EG TSCIDA+VLKAVARLLLSKLQISVEAITPR ASPRT+AVGFPSLT+RATL+ GGA AESGVD+GD QLR+SR+GPRRSRESTRTA+R+GA NGTSACSSRGQRRR GR YEEGVSREGGRD GVGRSRSGAPDDATSIWSGWHTTGIPSWDIL
Sbjct: 258 KLQKRGACLDDGSIGPNSAPEDVDDCERPGASPEIGGHAARAGRRSGSRGRHSGTVYRLAGMSEEERQQMLDLREELRREEVAIAAAQTLVGEMSENIRRAEEERSRRLALKGDLARVLALCHEDPLVGANGEKGLQTESGGKSFDRTGRLDPQPIPVPKRSTLLYLQDANGSELLPATLLHSSDLPVGSTNDGSGLADDHGVEMGEGSVSTVLLPAIGPTRLSRQPQDWELENNEHDQQRVPQRXXXXXXXXXXXHEHMALEVPSRGADGTEGDDAIESSRGNRRGGMREKLALWPEFTIVPHTAGVGRPPREGGDIAYSEE-RPWEGTTSCIDAEVLKAVARLLLSKLQISVEAITPRLASPRTQAVGFPSLTERATLDGGGARAESGVDMGDRQLRNSRRGPRRSRESTRTARRHGAGNGTSACSSRGQRRRDGRGGTLSGDQYEEGVSREGGRDRGVGRSRSGAPDDATSIWSGWHTTGIPSWDIL 746
BLAST of mRNA_E-fasciculatus_F_contig14401.3204.1 vs. uniprot
Match: A0A6H5L4N5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4N5_9PHAE) HSP 1 Score: 591 bits (1523), Expect = 1.170e-205 Identity = 348/512 (67.97%), Postives = 380/512 (74.22%), Query Frame = 1
Query: 1 QLQKRGACLGDGSIGPSGESEGVNSRERPGASPETGANESGAGG-SGSRGRHGGTVYRLAGMSEEERQQMLDLREE-------LRREEVAIAAAQTLVGEMSEKLRRAEEERF-----------RTLDLKRDLA----RVLALCHEDPLVGTNGERGLLAESGGTSFDRTGCLDAQPILVPNTSALLSPQDANGSELLPPTLLHSLDLSMGSSNDGRGETDNHGAGVGEGSVSTVLLPAIGPTRSSPQPQGWEPENNEHDQQRLPQWELQQHYLLSNQHEHVALEVPFRGADETEGNDAVGSSRGNNGRGMSGNLALWPEFTIVPKPAGGGRPPREGGDIVYNEEERKGEGATSCIDAKVLKAVARLLLSKLQISVEAITPRQASPRTKAVGFPSLTKRATLEDGGAGAESGVDLGDGQLRHSRKGPRRSRESTRTAKRYGASNGTSACSSRGQRRRGGR--------YEEGVSREGGRDHGVGRSRSGAPDDATSIWSGWHTTGIPSWDIL 1443
+LQKRGACL DGSIG + E + V+ ERPGASPETG + +G G GSRGRH GTVYRLAGMSEEERQQMLDLREE LR + + G + +RR F R L+L+ RVLALCHEDPLVG NGERGL ESGG FDRTG LD QP VP TSA LSPQDA+GSELLPPTLLH+ DLSMGS+NDG G DNHGA VGEGSVST+LLPAIGPTR S QPQ WE ENNEHDQQR+PQ +LQQH L NQHEH+ALEVP RGAD T+GNDA+ SRGN G+ LALWPEFTIVP AG GRPPREGGDI +EE R EG SCIDA+VLKAVARLLLSKLQISVEAITPR A PRT A+ FPSLTKRATL GGAGAESGVD+G+ QLR+ R GPRRSRESTRTA+ Y A NG SAC+SR QRRRGGR YEEG+SREGGRD V RSRS PDDATSIWSGWH+TGIPSWDIL
Sbjct: 60 KLQKRGACLDDGSIGRNSEHKDVDGCERPGASPETGVHAAGGGRRGGSRGRHRGTVYRLAGMSEEERQQMLDLREEVCSCKFFLR---MILPRGAVHYGSLPNAIRRRANAFFAFKSDPFPLPSRWLNLRMRARSSPKRVLALCHEDPLVGANGERGLQTESGGKRFDRTGRLDPQPTPVPITSASLSPQDASGSELLPPTLLHNSDLSMGSANDGSGLADNHGAEVGEGSVSTLLLPAIGPTRLSRQPQDWELENNEHDQQRVPQRQLQQHQLQLNQHEHMALEVPSRGADGTDGNDAIEPSRGNGREGIREKLALWPEFTIVPHIAGVGRPPREGGDIACSEE-RPWEGTNSCIDAEVLKAVARLLLSKLQISVEAITPRLAFPRTHAMDFPSLTKRATLGSGGAGAESGVDMGNRQLRNPRTGPRRSRESTRTARPYEAGNGNSACNSREQRRRGGRGGTLSDDQYEEGMSREGGRDRDVDRSRSRVPDDATSIWSGWHSTGIPSWDIL 567 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14401.3204.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14401.3204.1 >prot_E-fasciculatus_F_contig14401.3204.1 ID=prot_E-fasciculatus_F_contig14401.3204.1|Name=mRNA_E-fasciculatus_F_contig14401.3204.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=481bp QLQKRGACLGDGSIGPSGESEGVNSRERPGASPETGANESGAGGSGSRGRback to top mRNA from alignment at E-fasciculatus_F_contig14401:530..2990- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14401.3204.1 ID=mRNA_E-fasciculatus_F_contig14401.3204.1|Name=mRNA_E-fasciculatus_F_contig14401.3204.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2461bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14401:530..2990- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14401:530..2990- >mRNA_E-fasciculatus_F_contig14401.3204.1 ID=mRNA_E-fasciculatus_F_contig14401.3204.1|Name=mRNA_E-fasciculatus_F_contig14401.3204.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2886bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14401:530..2990- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |