prot_E-fasciculatus_F_contig144.3199.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig144.3199.1
Unique Nameprot_E-fasciculatus_F_contig144.3199.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length81
Homology
BLAST of mRNA_E-fasciculatus_F_contig144.3199.1 vs. uniprot
Match: D7G389_ECTSI (Ras-related protein Rab n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G389_ECTSI)

HSP 1 Score: 145 bits (366), Expect = 1.610e-41
Identity = 76/81 (93.83%), Postives = 77/81 (95.06%), Query Frame = 0
Query:    1 MDQGGS-GGRQAAAAVTVKVLVLGDPATGKTSIIKRYVHDFFSGHHKTTVGVDFALKQLVVGDTTVKLQLWDIAGQASCGN 80
            MDQGGS GGRQAAAAVTVKVLVLGDPATGKTSIIKRYVHDFFSGHHKTTVGVDFALKQLVVGDTTVKLQLWDIAGQ   G+
Sbjct:   63 MDQGGSAGGRQAAAAVTVKVLVLGDPATGKTSIIKRYVHDFFSGHHKTTVGVDFALKQLVVGDTTVKLQLWDIAGQDRFGS 143          
BLAST of mRNA_E-fasciculatus_F_contig144.3199.1 vs. uniprot
Match: A0A7S2V4T6_9STRA (Ras-related protein Rab n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4T6_9STRA)

HSP 1 Score: 105 bits (261), Expect = 1.700e-26
Identity = 53/70 (75.71%), Postives = 59/70 (84.29%), Query Frame = 0
Query:   10 QAAAAVTVKVLVLGDPATGKTSIIKRYVHDFFSGHHKTTVGVDFALKQLVVGDTTVKLQLWDIAGQASCG 79
            +A  ++ +KVLVLGDPATGKTSIIKRYVH+FFS HHKTTVGVDFALKQL V  T V+LQLWDIAGQ   G
Sbjct:    3 EAGESLVLKVLVLGDPATGKTSIIKRYVHNFFSTHHKTTVGVDFALKQLHVRGTDVRLQLWDIAGQDRFG 72          
BLAST of mRNA_E-fasciculatus_F_contig144.3199.1 vs. uniprot
Match: A0A7S2APD4_9STRA (Ras-related protein Rab n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2APD4_9STRA)

HSP 1 Score: 104 bits (260), Expect = 4.420e-26
Identity = 51/63 (80.95%), Postives = 56/63 (88.89%), Query Frame = 0
Query:   17 VKVLVLGDPATGKTSIIKRYVHDFFSGHHKTTVGVDFALKQLVVGDTTVKLQLWDIAGQASCG 79
            +KVLVLGDPATGKTSIIKRYVH+FFS HH+TTVGVDFALKQL V +T V+LQLWDIAGQ   G
Sbjct:   28 LKVLVLGDPATGKTSIIKRYVHNFFSNHHRTTVGVDFALKQLQVYNTVVRLQLWDIAGQDRFG 90          
BLAST of mRNA_E-fasciculatus_F_contig144.3199.1 vs. uniprot
Match: A0A6V1S8I5_HETAK (Ras-related protein Rab n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1S8I5_HETAK)

HSP 1 Score: 103 bits (257), Expect = 7.140e-26
Identity = 52/64 (81.25%), Postives = 54/64 (84.38%), Query Frame = 0
Query:   16 TVKVLVLGDPATGKTSIIKRYVHDFFSGHHKTTVGVDFALKQLVVGDTTVKLQLWDIAGQASCG 79
            T KVLVLGDPATGKTSIIKRYVH+FFS HHKTTVGVDFALK L V  T VK+QLWDIAGQ   G
Sbjct:    9 TWKVLVLGDPATGKTSIIKRYVHNFFSDHHKTTVGVDFALKALNVNGTEVKMQLWDIAGQDRFG 72          
BLAST of mRNA_E-fasciculatus_F_contig144.3199.1 vs. uniprot
Match: A0A7S2S186_9STRA (Ras-related protein Rab n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S186_9STRA)

HSP 1 Score: 103 bits (256), Expect = 1.400e-25
Identity = 50/63 (79.37%), Postives = 55/63 (87.30%), Query Frame = 0
Query:   17 VKVLVLGDPATGKTSIIKRYVHDFFSGHHKTTVGVDFALKQLVVGDTTVKLQLWDIAGQASCG 79
            +KVLVLGDPATGKTSIIKRYVH+FFS HH+TTVGVDFALKQL V +  V+LQLWDIAGQ   G
Sbjct:    9 LKVLVLGDPATGKTSIIKRYVHNFFSNHHRTTVGVDFALKQLTVRNQLVRLQLWDIAGQDRFG 71          
BLAST of mRNA_E-fasciculatus_F_contig144.3199.1 vs. uniprot
Match: F0YEW4_AURAN (Ras-related protein Rab (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YEW4_AURAN)

HSP 1 Score: 100 bits (250), Expect = 3.860e-25
Identity = 54/81 (66.67%), Postives = 57/81 (70.37%), Query Frame = 0
Query:   18 KVLVLGDPATGKTSIIKRYVHDFFSGHHKTTVGVDFALKQLVVG-------------------DTTVKLQLWDIAGQASCG 79
            KVLVLGDPATGKTSIIKRYVH+FFS HH+TTVGVDFALKQL VG                   DTTV+LQLWDIAGQ   G
Sbjct:    1 KVLVLGDPATGKTSIIKRYVHNFFSNHHRTTVGVDFALKQLTVGRRAGAARVPPRVATARDRRDTTVRLQLWDIAGQDRFG 81          
BLAST of mRNA_E-fasciculatus_F_contig144.3199.1 vs. uniprot
Match: A0A397BPL7_9STRA (Ras-related protein Rab n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397BPL7_9STRA)

HSP 1 Score: 100 bits (250), Expect = 1.130e-24
Identity = 52/71 (73.24%), Postives = 60/71 (84.51%), Query Frame = 0
Query:    6 SGGR-QAAAAVTVKVLVLGDPATGKTSIIKRYVHDFFSGHHKTTVGVDFALKQLVVGDTTVKLQLWDIAGQ 75
            +GGR +AA    VKVLVLGD ATGKTSIIKRYVH+ FS HHKTT+GVDFALK + V +TT++LQLWDIAGQ
Sbjct:    8 NGGRVEAAQDAVVKVLVLGDAATGKTSIIKRYVHNVFSEHHKTTIGVDFALKPVTVQNTTLRLQLWDIAGQ 78          
BLAST of mRNA_E-fasciculatus_F_contig144.3199.1 vs. uniprot
Match: A0A024TU36_9STRA (Ras-related protein Rab n=6 Tax=Aphanomyces TaxID=100860 RepID=A0A024TU36_9STRA)

HSP 1 Score: 100 bits (250), Expect = 1.190e-24
Identity = 52/71 (73.24%), Postives = 60/71 (84.51%), Query Frame = 0
Query:    6 SGGR-QAAAAVTVKVLVLGDPATGKTSIIKRYVHDFFSGHHKTTVGVDFALKQLVVGDTTVKLQLWDIAGQ 75
            +GGR +AA    VKVLVLGD ATGKTSIIKRYVH+ FS HHKTT+GVDFALK + V +TT++LQLWDIAGQ
Sbjct:    8 NGGRVEAAQDAVVKVLVLGDAATGKTSIIKRYVHNVFSEHHKTTIGVDFALKPVTVQNTTLRLQLWDIAGQ 78          
BLAST of mRNA_E-fasciculatus_F_contig144.3199.1 vs. uniprot
Match: K3WGR3_GLOUD (Ras-related protein Rab n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WGR3_GLOUD)

HSP 1 Score: 99.8 bits (247), Expect = 2.790e-24
Identity = 49/65 (75.38%), Postives = 54/65 (83.08%), Query Frame = 0
Query:   11 AAAAVTVKVLVLGDPATGKTSIIKRYVHDFFSGHHKTTVGVDFALKQLVVGDTTVKLQLWDIAGQ 75
            AA    +KVLVLGD ATGKTSIIKRYVHD FS HH+TT+GVDFALK + V  TTV+LQLWDIAGQ
Sbjct:    8 AAQDAVIKVLVLGDAATGKTSIIKRYVHDAFSEHHRTTIGVDFALKAVTVNGTTVRLQLWDIAGQ 72          
BLAST of mRNA_E-fasciculatus_F_contig144.3199.1 vs. uniprot
Match: W2QJV6_PHYPN (Ras-related protein Rab n=3 Tax=Peronosporaceae TaxID=4777 RepID=W2QJV6_PHYPN)

HSP 1 Score: 99.8 bits (247), Expect = 2.910e-24
Identity = 49/65 (75.38%), Postives = 54/65 (83.08%), Query Frame = 0
Query:   11 AAAAVTVKVLVLGDPATGKTSIIKRYVHDFFSGHHKTTVGVDFALKQLVVGDTTVKLQLWDIAGQ 75
            AA    +KVLVLGD ATGKTSIIKRYVHD FS HH+TT+GVDFALK + V  TTV+LQLWDIAGQ
Sbjct:    8 AAQDAVIKVLVLGDAATGKTSIIKRYVHDAFSEHHRTTIGVDFALKAVTVSGTTVRLQLWDIAGQ 72          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig144.3199.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G389_ECTSI1.610e-4193.83Ras-related protein Rab n=1 Tax=Ectocarpus silicul... [more]
A0A7S2V4T6_9STRA1.700e-2675.71Ras-related protein Rab n=1 Tax=Fibrocapsa japonic... [more]
A0A7S2APD4_9STRA4.420e-2680.95Ras-related protein Rab n=1 Tax=Dictyocha speculum... [more]
A0A6V1S8I5_HETAK7.140e-2681.25Ras-related protein Rab n=1 Tax=Heterosigma akashi... [more]
A0A7S2S186_9STRA1.400e-2579.37Ras-related protein Rab n=1 Tax=Rhizochromulina ma... [more]
F0YEW4_AURAN3.860e-2566.67Ras-related protein Rab (Fragment) n=1 Tax=Aureoco... [more]
A0A397BPL7_9STRA1.130e-2473.24Ras-related protein Rab n=3 Tax=Aphanomyces astaci... [more]
A0A024TU36_9STRA1.190e-2473.24Ras-related protein Rab n=6 Tax=Aphanomyces TaxID=... [more]
K3WGR3_GLOUD2.790e-2475.38Ras-related protein Rab n=2 Tax=Pythiaceae TaxID=4... [more]
W2QJV6_PHYPN2.910e-2475.38Ras-related protein Rab n=3 Tax=Peronosporaceae Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 58..80
score: 36.07
coord: 17..38
score: 34.8
coord: 40..56
score: 28.36
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 17..80
e-value: 4.0E-4
score: -58.2
NoneNo IPR availableGENE3D3.40.50.300coord: 8..80
e-value: 3.7E-20
score: 73.9
NoneNo IPR availablePANTHERPTHR24073:SF897RAB38C, MEMBER OF RAS ONCOGENE FAMILY-RELATEDcoord: 12..80
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 12..80
NoneNo IPR availablePROSITEPS51419RABcoord: 12..80
score: 12.127
IPR001806Small GTPasePFAMPF00071Rascoord: 18..76
e-value: 6.8E-17
score: 61.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 16..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig144contigE-fasciculatus_F_contig144:2847..3722 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig144.3199.1mRNA_E-fasciculatus_F_contig144.3199.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig144 2847..3722 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig144.3199.1 ID=prot_E-fasciculatus_F_contig144.3199.1|Name=mRNA_E-fasciculatus_F_contig144.3199.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=81bp
MDQGGSGGRQAAAAVTVKVLVLGDPATGKTSIIKRYVHDFFSGHHKTTVG
VDFALKQLVVGDTTVKLQLWDIAGQASCGN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR001806Small_GTPase