prot_E-fasciculatus_F_contig144.3198.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig144.3198.1
Unique Nameprot_E-fasciculatus_F_contig144.3198.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length131
Homology
BLAST of mRNA_E-fasciculatus_F_contig144.3198.1 vs. uniprot
Match: D7G389_ECTSI (Ras-related protein Rab n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G389_ECTSI)

HSP 1 Score: 251 bits (641), Expect = 2.990e-82
Identity = 121/123 (98.37%), Postives = 122/123 (99.19%), Query Frame = 0
Query:    1 DRFGSIARAYYKEALGALLVYDIGRSSSFKTVQRWKGEIDEKVRLPDGGRLPVVLLANKCDLDIPIDREALTWFCDRHGFAGWFETSAKQNINIDEASRFLVEKVLERIPASGHPSGRLGMKV 123
            DRFGSIARAYYKEALGALLVYDIGRSSSFKTVQRWKGEIDEKVRLPDGGRLPVVLLANKCDLDIPIDREALTWFCDRHGFAGWFETSAKQNINIDE SRFLVEKVLERIPASGHPSGRLGMK+
Sbjct:  139 DRFGSIARAYYKEALGALLVYDIGRSSSFKTVQRWKGEIDEKVRLPDGGRLPVVLLANKCDLDIPIDREALTWFCDRHGFAGWFETSAKQNINIDEGSRFLVEKVLERIPASGHPSGRLGMKL 261          
BLAST of mRNA_E-fasciculatus_F_contig144.3198.1 vs. uniprot
Match: A0A6V1S8I5_HETAK (Ras-related protein Rab n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1S8I5_HETAK)

HSP 1 Score: 146 bits (369), Expect = 6.460e-42
Identity = 68/119 (57.14%), Postives = 88/119 (73.95%), Query Frame = 0
Query:    1 DRFGSIARAYYKEALGALLVYDIGRSSSFKTVQRWKGEIDEKVRLPDGGRLPVVLLANKCDLD-IPIDREALTWFCDRHGFAGWFETSAKQNINIDEASRFLVEKVLERIPASGHPSGR 118
            DRFG IAR YYK++ GAL+VYD  R  +F TV++WK EID+KV+LPDG  +P+VLLANKCDLD   +D+  L  FC  HGF GWF+TSA+ NINI++A RFLV+ +LE+      P+ R
Sbjct:   69 DRFGVIARTYYKDSYGALIVYDASRPPTFDTVEKWKREIDDKVKLPDGSNIPIVLLANKCDLDKAEVDKSYLDQFCQEHGFIGWFDTSARLNINIEQACRFLVDNLLEKRDLLNPPAKR 187          
BLAST of mRNA_E-fasciculatus_F_contig144.3198.1 vs. uniprot
Match: F0YEW4_AURAN (Ras-related protein Rab (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YEW4_AURAN)

HSP 1 Score: 140 bits (352), Expect = 1.010e-39
Identity = 67/100 (67.00%), Postives = 78/100 (78.00%), Query Frame = 0
Query:    1 DRFGSIARAYYKEALGALLVYDIGRSSSFKTVQRWKGEIDEKVRLPDGGRLPVVLLANKCDL-DIPIDREALTWFCDRHGFAGWFETSAKQNINIDEASR 99
            DRFG+IAR YYK+A GA LVYDI R  +FKT+ +WK EID KV LP+G  LPVVLLANKCDL D+ IDR+ L  FC  HGF GWFETSAK ++NID A+R
Sbjct:   78 DRFGAIARVYYKDAFGAFLVYDISRPETFKTIVKWKDEIDSKVHLPNGMALPVVLLANKCDLEDVAIDRQELDDFCRSHGFIGWFETSAKADVNIDTAAR 177          
BLAST of mRNA_E-fasciculatus_F_contig144.3198.1 vs. uniprot
Match: A0A7S2S186_9STRA (Ras-related protein Rab n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S186_9STRA)

HSP 1 Score: 139 bits (351), Expect = 5.030e-39
Identity = 67/108 (62.04%), Postives = 84/108 (77.78%), Query Frame = 0
Query:    1 DRFGSIARAYYKEALGALLVYDIGRSSSFKTVQRWKGEIDEKVRLPDGGRLPVVLLANKCDLD-IPIDREALTWFCDRHGFAGWFETSAKQNINIDEASRFLVEKVLE 107
            DRFG+I+R YYK+ALGA LVYD+ R ++F TV +WKGEID KV LP+   LPVVLLANKCD++ + ID +AL  FC+ HGF  WFETSAK +  ID A+RFL+E +LE
Sbjct:   68 DRFGAISRVYYKDALGAFLVYDLARPATFDTVVKWKGEIDAKVVLPNHEPLPVVLLANKCDIEGVKIDSDALDKFCEEHGFIAWFETSAKTDHKIDAAARFLLENILE 175          
BLAST of mRNA_E-fasciculatus_F_contig144.3198.1 vs. uniprot
Match: A0A7S2G1P4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G1P4_9STRA)

HSP 1 Score: 135 bits (339), Expect = 1.830e-38
Identity = 66/107 (61.68%), Postives = 80/107 (74.77%), Query Frame = 0
Query:    1 DRFGSIARAYYKEALGALLVYDIGRSSSFKTVQRWKGEIDEKVRLPDGGRLPVVLLANKCDLD-IPIDREALTWFCDRHGFAGWFETSAKQNINIDEASRFLVEKVL 106
            DRFG+IAR YYK+A GA LVYD+ R  +F+TV +WK EID KV LP+G  LPVVLLANKCD++ + ID + L  FC  HGF  WFETSAK +  ID A+R+LVE VL
Sbjct:   10 DRFGAIARVYYKDAYGAFLVYDLSRPRTFETVAKWKKEIDSKVLLPNGKPLPVVLLANKCDIEGVEIDADELNRFCTEHGFITWFETSAKTDHKIDAAARYLVENVL 116          
BLAST of mRNA_E-fasciculatus_F_contig144.3198.1 vs. uniprot
Match: A0A4U1FQJ1_MONMO (Uncharacterized protein (Fragment) n=3 Tax=Cetacea TaxID=9721 RepID=A0A4U1FQJ1_MONMO)

HSP 1 Score: 135 bits (339), Expect = 3.160e-38
Identity = 63/108 (58.33%), Postives = 79/108 (73.15%), Query Frame = 0
Query:    1 DRFGSIARAYYKEALGALLVYDIGRSSSFKTVQRWKGEIDEKVRLPDGGRLPVVLLANKCDL--DIPIDREALTWFCDRHGFAGWFETSAKQNINIDEASRFLVEKVL 106
            +RFG++ R YYKEA+GA +V+DI R S+F+ V +WK ++D KV LP+G  +P VLLANKCD   D   +   +  FC  HGF GWFETSAK NINIDEASRFLVE +L
Sbjct:    2 ERFGNMTRVYYKEAVGAFIVFDISRGSTFEAVLKWKNDLDSKVHLPNGNPIPAVLLANKCDQKKDSGQNTPQMDQFCKEHGFTGWFETSAKDNINIDEASRFLVENIL 109          
BLAST of mRNA_E-fasciculatus_F_contig144.3198.1 vs. uniprot
Match: L5KFT0_PTEAL (Ras-related protein Rab n=2 Tax=Pteropus alecto TaxID=9402 RepID=L5KFT0_PTEAL)

HSP 1 Score: 136 bits (343), Expect = 6.870e-38
Identity = 64/108 (59.26%), Postives = 81/108 (75.00%), Query Frame = 0
Query:    1 DRFGSIARAYYKEALGALLVYDIGRSSSFKTVQRWKGEIDEKVRLPDGGRLPVVLLANKCDL--DIPIDREALTWFCDRHGFAGWFETSAKQNINIDEASRFLVEKVL 106
            +RFG++ R YYKEA+GA +V+DI R S+F+ V +WK ++D KV LP+GG +PVVLLANKCD   D   +   +  FC  HGF GWFETSAK NINIDEA+RFLVE +L
Sbjct:   76 ERFGNMTRVYYKEAVGAFVVFDISRGSTFEAVLKWKSDLDSKVHLPNGGPIPVVLLANKCDQKKDGGQNPSQMEQFCKEHGFTGWFETSAKDNINIDEAARFLVENIL 183          
BLAST of mRNA_E-fasciculatus_F_contig144.3198.1 vs. uniprot
Match: UPI00109F5083 (ras-related protein Rab-32 n=1 Tax=Grammomys surdaster TaxID=491861 RepID=UPI00109F5083)

HSP 1 Score: 136 bits (343), Expect = 8.550e-38
Identity = 64/108 (59.26%), Postives = 79/108 (73.15%), Query Frame = 0
Query:    1 DRFGSIARAYYKEALGALLVYDIGRSSSFKTVQRWKGEIDEKVRLPDGGRLPVVLLANKCDL--DIPIDREALTWFCDRHGFAGWFETSAKQNINIDEASRFLVEKVL 106
            +RFG++ R YYKEALGA +V+D+ RSS+F  V +WK ++D KV LP+G R+P VLLANKCD   D       +  FC  HGF GWFETSAK NINIDEA+RFLVE +L
Sbjct:   84 ERFGNMTRVYYKEALGAFIVFDVSRSSTFDAVLKWKNDLDSKVHLPNGSRIPAVLLANKCDQKKDSSQSPSQMDQFCKDHGFTGWFETSAKDNINIDEATRFLVENML 191          
BLAST of mRNA_E-fasciculatus_F_contig144.3198.1 vs. uniprot
Match: RAB32_HUMAN (Ras-related protein Rab-32 n=30 Tax=Euarchontoglires TaxID=314146 RepID=RAB32_HUMAN)

HSP 1 Score: 136 bits (343), Expect = 9.020e-38
Identity = 64/108 (59.26%), Postives = 81/108 (75.00%), Query Frame = 0
Query:    1 DRFGSIARAYYKEALGALLVYDIGRSSSFKTVQRWKGEIDEKVRLPDGGRLPVVLLANKCDL--DIPIDREALTWFCDRHGFAGWFETSAKQNINIDEASRFLVEKVL 106
            +RFG++ R YYKEA+GA +V+DI RSS+F+ V +WK ++D KV LP+G  +P VLLANKCD   D       +  FC  HGFAGWFETSAK NINI+EA+RFLVEK+L
Sbjct:   86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKIL 193          
BLAST of mRNA_E-fasciculatus_F_contig144.3198.1 vs. uniprot
Match: A0A7S2V4T6_9STRA (Ras-related protein Rab n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4T6_9STRA)

HSP 1 Score: 135 bits (341), Expect = 1.040e-37
Identity = 66/109 (60.55%), Postives = 82/109 (75.23%), Query Frame = 0
Query:    1 DRFGSIARAYYKEALGALLVYDIGRSSSFKTVQRWKGEIDEKVRLPDGGRLPVVLLANKCDLD-IPIDREALTWFCDRHGFAGWFETSAKQNINIDEASRFLVEKVLER 108
            DRFG+IAR YYK+A GA+LVYD+ R  +F+ V +WK EID KV LP+G  +PVVLL NK DL+   +D E L  FC +HGF GWF+TSAK N NI EA+ FLVEK+LE+
Sbjct:   69 DRFGAIARVYYKDAFGAMLVYDVTRPPTFEMVSKWKEEIDTKVSLPNGEPIPVVLLGNKSDLEKAKVDTEYLDEFCKQHGFVGWFDTSAKTNQNIVEAATFLVEKILEK 177          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig144.3198.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G389_ECTSI2.990e-8298.37Ras-related protein Rab n=1 Tax=Ectocarpus silicul... [more]
A0A6V1S8I5_HETAK6.460e-4257.14Ras-related protein Rab n=1 Tax=Heterosigma akashi... [more]
F0YEW4_AURAN1.010e-3967.00Ras-related protein Rab (Fragment) n=1 Tax=Aureoco... [more]
A0A7S2S186_9STRA5.030e-3962.04Ras-related protein Rab n=1 Tax=Rhizochromulina ma... [more]
A0A7S2G1P4_9STRA1.830e-3861.68Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A4U1FQJ1_MONMO3.160e-3858.33Uncharacterized protein (Fragment) n=3 Tax=Cetacea... [more]
L5KFT0_PTEAL6.870e-3859.26Ras-related protein Rab n=2 Tax=Pteropus alecto Ta... [more]
UPI00109F50838.550e-3859.26ras-related protein Rab-32 n=1 Tax=Grammomys surda... [more]
RAB32_HUMAN9.020e-3859.26Ras-related protein Rab-32 n=30 Tax=Euarchontoglir... [more]
A0A7S2V4T6_9STRA1.040e-3760.55Ras-related protein Rab n=1 Tax=Fibrocapsa japonic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 83..105
score: 32.89
coord: 49..62
score: 41.5
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 3..108
e-value: 0.0022
score: -56.6
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 1..108
e-value: 7.6E-11
score: 25.7
NoneNo IPR availableGENE3D3.40.50.300coord: 1..109
e-value: 2.0E-25
score: 91.3
NoneNo IPR availablePANTHERPTHR24073:SF897RAB38C, MEMBER OF RAS ONCOGENE FAMILY-RELATEDcoord: 1..107
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 1..107
NoneNo IPR availablePROSITEPS51419RABcoord: 1..128
score: 17.244
IPR001806Small GTPasePFAMPF00071Rascoord: 1..106
e-value: 1.1E-18
score: 67.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig144contigE-fasciculatus_F_contig144:86..2172 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig144.3198.1mRNA_E-fasciculatus_F_contig144.3198.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig144 86..2172 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig144.3198.1 ID=prot_E-fasciculatus_F_contig144.3198.1|Name=mRNA_E-fasciculatus_F_contig144.3198.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=131bp
DRFGSIARAYYKEALGALLVYDIGRSSSFKTVQRWKGEIDEKVRLPDGGR
LPVVLLANKCDLDIPIDREALTWFCDRHGFAGWFETSAKQNINIDEASRF
LVEKVLERIPASGHPSGRLGMKVREWCSYV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR001806Small_GTPase