mRNA_E-fasciculatus_F_contig1439.3192.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1439.3192.1
Unique NamemRNA_E-fasciculatus_F_contig1439.3192.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1439.3192.1 vs. uniprot
Match: A0A6H5KVN5_9PHAE (HIT domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KVN5_9PHAE)

HSP 1 Score: 298 bits (762), Expect = 3.460e-95
Identity = 183/203 (90.15%), Postives = 188/203 (92.61%), Query Frame = 1 
Query:  277 RAIATASFIRVASARSFSGVGSDLAFAVVKRAPP-SSAWIGRASCASSRSSSCSVTPSSRIATVLRHMSSNPGXXXXXXXXXXXXXXXXXDGGEATIFDKIISKDIPADIIHEDELCLAFKDISPQAPVHFLVIPKSRDGLTQLSKAVESNKALLGHLMFVAQKVAKEQGLDEGFRVVVNDGVQGCQTVYHLHIHVIVGRPLS 882
            RAIATASFIRVAS RSF+ VGSDLAF VVKRAPP SSAWIGRASC SS  SSC +TP SRIATV+R+MSSNPGXXXXXXXXXXXXXXXXX   EATIFDKIISK+IPADIIHEDELCLAFKDISPQAPVHFLVIPKSRDGLTQLSKAVESNKALLGHLMFVAQKVAKEQGLDEGFRVVVNDGVQGCQTVYHLHIHVI GR L 
Sbjct:    3 RAIATASFIRVASLRSFAVVGSDLAFGVVKRAPPPSSAWIGRASCTSS--SSCRITPRSRIATVIRNMSSNPGXXXXXXXXXXXXXXXXX-XXEATIFDKIISKEIPADIIHEDELCLAFKDISPQAPVHFLVIPKSRDGLTQLSKAVESNKALLGHLMFVAQKVAKEQGLDEGFRVVVNDGVQGCQTVYHLHIHVIGGRQLK 202
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BLAST of mRNA_E-fasciculatus_F_contig1439.3192.1 vs. uniprot
Match: C1EDE2_MICCC (HIT domain-containing protein n=2 Tax=cellular organisms TaxID=131567 RepID=C1EDE2_MICCC)

HSP 1 Score: 171 bits (434), Expect = 8.930e-48
Identity = 80/111 (72.07%), Postives = 98/111 (88.29%), Query Frame = 1 
Query:  550 GEATIFDKIISKDIPADIIHEDELCLAFKDISPQAPVHFLVIPKSRDGLTQLSKAVESNKALLGHLMFVAQKVAKEQGLDEGFRVVVNDGVQGCQTVYHLHIHVIVGRPLS 882
            GE TIFDKII+K+IP+D+I+ED LCLAF+DI+PQA  HFLVIPK R GLTQLSKA E +K LLGHL++ AQKVAK++ LD+GFRVV+NDGV+GCQ+VYHLHIHV+ G+ LS
Sbjct:    5 GEPTIFDKIIAKEIPSDVIYEDNLCLAFRDIAPQAKTHFLVIPKIRSGLTQLSKAEEGHKELLGHLLYTAQKVAKQEKLDKGFRVVINDGVEGCQSVYHLHIHVVGGQQLS 115
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BLAST of mRNA_E-fasciculatus_F_contig1439.3192.1 vs. uniprot
Match: A0A7S1SQN7_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SQN7_9CHLO)

HSP 1 Score: 170 bits (431), Expect = 2.950e-47
Identity = 77/108 (71.30%), Postives = 98/108 (90.74%), Query Frame = 1 
Query:  559 TIFDKIISKDIPADIIHEDELCLAFKDISPQAPVHFLVIPKSRDGLTQLSKAVESNKALLGHLMFVAQKVAKEQGLDEGFRVVVNDGVQGCQTVYHLHIHVIVGRPLS 882
            TIFDKI++K+IPAD+I+ED+LCLAF+D++PQAP HFLVIPK+R GLTQLSKAVE++K LLGHL++VAQ VAK++GL EGFR+V+NDG  GCQ+VYHLHIH + GR L+
Sbjct:   15 TIFDKIVAKEIPADVIYEDDLCLAFRDVNPQAPTHFLVIPKARSGLTQLSKAVEAHKGLLGHLIYVAQDVAKKEGLGEGFRLVINDGPNGCQSVYHLHIHCLGGRQLT 122
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BLAST of mRNA_E-fasciculatus_F_contig1439.3192.1 vs. uniprot
Match: A0A5B8MF15_9CHLO (Histidine triad family protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MF15_9CHLO)

HSP 1 Score: 169 bits (429), Expect = 7.660e-47
Identity = 78/108 (72.22%), Postives = 97/108 (89.81%), Query Frame = 1 
Query:  559 TIFDKIISKDIPADIIHEDELCLAFKDISPQAPVHFLVIPKSRDGLTQLSKAVESNKALLGHLMFVAQKVAKEQGLDEGFRVVVNDGVQGCQTVYHLHIHVIVGRPLS 882
            TIFDK+ISK+IPAD+I+ED+ CLAF+DI+PQAPVHFLVIPK+RDGLT+LSKA E +K +LGHL++ AQKVAK++GL EGFRV +NDG  GCQ+VYHLH+HVI GR L+
Sbjct:   24 TIFDKVISKEIPADVIYEDDKCLAFRDINPQAPVHFLVIPKARDGLTRLSKAHEGHKDILGHLLYTAQKVAKDEGLGEGFRVAINDGPGGCQSVYHLHLHVIGGRQLT 131
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BLAST of mRNA_E-fasciculatus_F_contig1439.3192.1 vs. uniprot
Match: C1MY73_MICPC (Predicted protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1MY73_MICPC)

HSP 1 Score: 167 bits (424), Expect = 2.610e-46
Identity = 77/111 (69.37%), Postives = 97/111 (87.39%), Query Frame = 1 
Query:  550 GEATIFDKIISKDIPADIIHEDELCLAFKDISPQAPVHFLVIPKSRDGLTQLSKAVESNKALLGHLMFVAQKVAKEQGLDEGFRVVVNDGVQGCQTVYHLHIHVIVGRPLS 882
            GE TIFDKI++K+IPA +I+ED LCLAF+D++PQA  HFLVIPK R GLT+LS A E +KALLGHL+F AQ+VAK++GL EGFRVV+NDGVQGCQ+VYHLH+HV+ G+ L+
Sbjct:    5 GEPTIFDKIVAKEIPATVIYEDNLCLAFRDVAPQAKTHFLVIPKIRAGLTRLSNAEEEHKALLGHLLFTAQRVAKDEGLGEGFRVVINDGVQGCQSVYHLHLHVLGGQQLT 115
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BLAST of mRNA_E-fasciculatus_F_contig1439.3192.1 vs. uniprot
Match: A0A8J6C1F3_DIALT (HIT domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C1F3_DIALT)

HSP 1 Score: 167 bits (422), Expect = 4.640e-46
Identity = 77/110 (70.00%), Postives = 95/110 (86.36%), Query Frame = 1 
Query:  553 EATIFDKIISKDIPADIIHEDELCLAFKDISPQAPVHFLVIPKSRDGLTQLSKAVESNKALLGHLMFVAQKVAKEQGLDEGFRVVVNDGVQGCQTVYHLHIHVIVGRPLS 882
            E TIFDKI+SK+IP+D+++EDELCLAF+DI+PQAPVH LVIPK +DGL+QLSKA   +K LLGHL+FVAQ VAK +GL EGFR+V+NDG  GCQ VYHLH+HV+ GR L+
Sbjct:    5 ETTIFDKILSKEIPSDVVYEDELCLAFRDIAPQAPVHVLVIPKRKDGLSQLSKADARHKELLGHLLFVAQHVAKSEGLAEGFRIVINDGKHGCQAVYHLHLHVLGGRQLT 114
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BLAST of mRNA_E-fasciculatus_F_contig1439.3192.1 vs. uniprot
Match: A0A836C9C8_9STRA (14 kDa zinc-binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9C8_9STRA)

HSP 1 Score: 167 bits (423), Expect = 5.680e-46
Identity = 78/108 (72.22%), Postives = 93/108 (86.11%), Query Frame = 1 
Query:  559 TIFDKIISKDIPADIIHEDELCLAFKDISPQAPVHFLVIPKSRDGLTQLSKAVESNKALLGHLMFVAQKVAKEQGLDEGFRVVVNDGVQGCQTVYHLHIHVIVGRPLS 882
            T+FDKI  K IP+DII+ED+ CLAF DISPQAPVHFLVIPK R+G++QLS A E NK LLGHLM+VAQ VAK+QGL+ GFRVVVNDG +GCQ+VYHLH+HV+ GR L+
Sbjct:   24 TLFDKIAQKQIPSDIIYEDDKCLAFNDISPQAPVHFLVIPKDREGMSQLSTATEDNKPLLGHLMYVAQLVAKQQGLERGFRVVVNDGKEGCQSVYHLHLHVVGGRQLA 131
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BLAST of mRNA_E-fasciculatus_F_contig1439.3192.1 vs. uniprot
Match: A0A388K5I6_CHABU (HIT domain-containing protein n=2 Tax=Chara braunii TaxID=69332 RepID=A0A388K5I6_CHABU)

HSP 1 Score: 169 bits (428), Expect = 1.410e-45
Identity = 78/113 (69.03%), Postives = 95/113 (84.07%), Query Frame = 1 
Query:  544 DGGEATIFDKIISKDIPADIIHEDELCLAFKDISPQAPVHFLVIPKSRDGLTQLSKAVESNKALLGHLMFVAQKVAKEQGLDEGFRVVVNDGVQGCQTVYHLHIHVIVGRPLS 882
            D G  TIFDKI+ K+IP   ++ED+ CLAFKDISPQAPVH ++IPK RDGLTQLSKA E +K +LGHL++VAQ VAK+QGLDEGFR+V+NDG QGCQ+VYHLHIH+I GR + 
Sbjct:  102 DTGAPTIFDKIVKKEIPCTSVYEDDKCLAFKDISPQAPVHIVLIPKERDGLTQLSKAEERHKDILGHLLYVAQLVAKQQGLDEGFRIVINDGAQGCQSVYHLHIHIIGGRMMK 214
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BLAST of mRNA_E-fasciculatus_F_contig1439.3192.1 vs. uniprot
Match: A0A7S0MYZ0_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0MYZ0_9CHLO)

HSP 1 Score: 167 bits (423), Expect = 4.870e-45
Identity = 76/113 (67.26%), Postives = 97/113 (85.84%), Query Frame = 1 
Query:  544 DGGEATIFDKIISKDIPADIIHEDELCLAFKDISPQAPVHFLVIPKSRDGLTQLSKAVESNKALLGHLMFVAQKVAKEQGLDEGFRVVVNDGVQGCQTVYHLHIHVIVGRPLS 882
            D G+ TIFDKII+K+IPA +++ED+LCLAF+D++PQAPVH LVIPK R GLTQLSKAV  +KALLGHLM+ AQ+VAK + LD GFR+V+NDG +GCQ+VYHLHIH++ GR + 
Sbjct:   88 DSGDPTIFDKIIAKEIPATVVYEDDLCLAFRDVNPQAPVHILVIPKVRAGLTQLSKAVPEHKALLGHLMYTAQEVAKSEKLDAGFRLVINDGPEGCQSVYHLHIHILGGRQMK 200
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BLAST of mRNA_E-fasciculatus_F_contig1439.3192.1 vs. uniprot
Match: A0A6V2PK39_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2PK39_HETAK)

HSP 1 Score: 164 bits (416), Expect = 6.450e-45
Identity = 80/111 (72.07%), Postives = 95/111 (85.59%), Query Frame = 1 
Query:  553 EATIFDKIISKDIPADIIHEDELCLAFKDISPQAPVHFLVIPKSRDGLTQLSKAVESNKALLGHLMFVAQKVAKEQGLDEG-FRVVVNDGVQGCQTVYHLHIHVIVGRPLS 882
            E TIFDKIISK+IPA+IIHEDELC+AF D++PQAPVHFLVIPKS+DGL +LS A E  KALLGHL+F AQ+VA ++GL EG FR V+NDG  GCQ+VYHLHIHV+ GR L+
Sbjct:   24 ETTIFDKIISKEIPANIIHEDELCIAFHDVNPQAPVHFLVIPKSKDGLNKLSNAREDQKALLGHLLFTAQEVAGKEGLAEGGFRTVINDGRNGCQSVYHLHIHVLGGRQLT 134
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1439.3192.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KVN5_9PHAE3.460e-9590.15HIT domain-containing protein n=2 Tax=Ectocarpus T... [more]
C1EDE2_MICCC8.930e-4872.07HIT domain-containing protein n=2 Tax=cellular org... [more]
A0A7S1SQN7_9CHLO2.950e-4771.30Hypothetical protein n=1 Tax=Tetraselmis chuii Tax... [more]
A0A5B8MF15_9CHLO7.660e-4772.22Histidine triad family protein n=1 Tax=Chloropicon... [more]
C1MY73_MICPC2.610e-4669.37Predicted protein n=2 Tax=Micromonas pusilla TaxID... [more]
A0A8J6C1F3_DIALT4.640e-4670.00HIT domain-containing protein n=2 Tax=Diacronema l... [more]
A0A836C9C8_9STRA5.680e-4672.2214 kDa zinc-binding protein n=1 Tax=Tribonema minu... [more]
A0A388K5I6_CHABU1.410e-4569.03HIT domain-containing protein n=2 Tax=Chara brauni... [more]
A0A7S0MYZ0_9CHLO4.870e-4567.26Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
A0A6V2PK39_HETAK6.450e-4572.07Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1439contigE-fasciculatus_F_contig1439:6851..10854 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score209.9
Seed ortholog evalue8.2e-52
Seed eggNOG ortholog2880.D8LKN0
Preferred nameHINT2
KEGG koko:K02503
GOsGO:0000118,GO:0003674,GO:0003824,GO:0005080,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005739,GO:0005829,GO:0005856,GO:0005886,GO:0006139,GO:0006163,GO:0006195,GO:0006355,GO:0006629,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006915,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008219,GO:0009056,GO:0009058,GO:0009117,GO:0009150,GO:0009154,GO:0009166,GO:0009259,GO:0009261,GO:0009889,GO:0009892,GO:0009966,GO:0009967,GO:0009987,GO:0010468,GO:0010556,GO:0010605,GO:0010646,GO:0010647,GO:0012501,GO:0016020,GO:0016042,GO:0016787,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019899,GO:0019900,GO:0019901,GO:0023051,GO:0023052,GO:0023056,GO:0031323,GO:0031324,GO:0031326,GO:0031399,GO:0031400,GO:0031974,GO:0031981,GO:0032268,GO:0032269,GO:0032991,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035556,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0050789,GO:0050794,GO:0050848,GO:0050850,GO:0050896,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051252,GO:0051716,GO:0055086,GO:0060255,GO:0065007,GO:0070013,GO:0071704,GO:0071944,GO:0072331,GO:0072332,GO:0072521,GO:0072523,GO:0080090,GO:0097190,GO:0097193,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901983,GO:1901984,GO:1902494,GO:1902531,GO:1902533,GO:1903506,GO:2000112,GO:2000756,GO:2000757,GO:2001141
EggNOG free text desc.nucleoside phosphate binding
EggNOG OGsCOG0537@1,KOG3275@2759
COG Functional cat.FG
BiGG ReactioniRC1080.CRv4_Au5_s6_g12858_t1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04147
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionHistidine triad (HIT) protein
Ec32 orthologEc-16_003610.1
Exons5
Model size1676
Cds size456
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927927.4687808-UTR-E-fasciculatus_F_contig1439:6850..75961622927927.4687808-UTR-E-fasciculatus_F_contig1439:6850..7596Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1439 6851..7596 -
1695995754.1540413-UTR-E-fasciculatus_F_contig1439:6850..75961695995754.1540413-UTR-E-fasciculatus_F_contig1439:6850..7596Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1439 6851..7596 -
1622927927.5382092-UTR-E-fasciculatus_F_contig1439:9677..97381622927927.5382092-UTR-E-fasciculatus_F_contig1439:9677..9738Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1439 9678..9738 -
1695995754.1955132-UTR-E-fasciculatus_F_contig1439:9677..97381695995754.1955132-UTR-E-fasciculatus_F_contig1439:9677..9738Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1439 9678..9738 -
1622927927.5605996-UTR-E-fasciculatus_F_contig1439:10441..108541622927927.5605996-UTR-E-fasciculatus_F_contig1439:10441..10854Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1439 10442..10854 -
1695995754.2052712-UTR-E-fasciculatus_F_contig1439:10441..108541695995754.2052712-UTR-E-fasciculatus_F_contig1439:10441..10854Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1439 10442..10854 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927927.4864237-CDS-E-fasciculatus_F_contig1439:7596..76591622927927.4864237-CDS-E-fasciculatus_F_contig1439:7596..7659Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1439 7597..7659 -
1695995754.1637776-CDS-E-fasciculatus_F_contig1439:7596..76591695995754.1637776-CDS-E-fasciculatus_F_contig1439:7596..7659Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1439 7597..7659 -
1622927927.498605-CDS-E-fasciculatus_F_contig1439:8304..83911622927927.498605-CDS-E-fasciculatus_F_contig1439:8304..8391Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1439 8305..8391 -
1695995754.1719265-CDS-E-fasciculatus_F_contig1439:8304..83911695995754.1719265-CDS-E-fasciculatus_F_contig1439:8304..8391Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1439 8305..8391 -
1622927927.5105445-CDS-E-fasciculatus_F_contig1439:8973..91021622927927.5105445-CDS-E-fasciculatus_F_contig1439:8973..9102Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1439 8974..9102 -
1695995754.179685-CDS-E-fasciculatus_F_contig1439:8973..91021695995754.179685-CDS-E-fasciculatus_F_contig1439:8973..9102Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1439 8974..9102 -
1622927927.5248525-CDS-E-fasciculatus_F_contig1439:9500..96771622927927.5248525-CDS-E-fasciculatus_F_contig1439:9500..9677Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1439 9501..9677 -
1695995754.1875556-CDS-E-fasciculatus_F_contig1439:9500..96771695995754.1875556-CDS-E-fasciculatus_F_contig1439:9500..9677Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1439 9501..9677 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1439.3192.1prot_E-fasciculatus_F_contig1439.3192.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1439 7597..9677 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1439.3192.1

>prot_E-fasciculatus_F_contig1439.3192.1 ID=prot_E-fasciculatus_F_contig1439.3192.1|Name=mRNA_E-fasciculatus_F_contig1439.3192.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=152bp
MSSNPGGGEEEKAKAVAAAAAGGDGGEATIFDKIISKDIPADIIHEDELC
LAFKDISPQAPVHFLVIPKSRDGLTQLSKAVESNKALLGHLMFVAQKVAK
EQGLDEGFRVVVNDGVQGCQTVYHLHIHVIVGRPLSAVEMNFLHLDHSLV
C*
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mRNA from alignment at E-fasciculatus_F_contig1439:6851..10854-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1439.3192.1 ID=mRNA_E-fasciculatus_F_contig1439.3192.1|Name=mRNA_E-fasciculatus_F_contig1439.3192.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4004bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1439:6851..10854- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CACCAGGTGCGGCGGACATTGCACACTTCGAGTTTGCGCATGTTCAGGTA
AGAGAGCTCTAAAGGCGTTCCGTCGTGTCACAGGGTAGTTGTTCGGTTGG
TTGCAGCATGTTCTGCATCTGGCCTAGCCATCTCCTACATAGTATGCGCA
CCATGAGCATGCTGCGCTGCACGCCCTTTTCCCCGCCGTTTGCATCTTGC
CAAGCACCAACTCCCACCTACACGAACACATTGTCCTCGGTTGCAATGGA
TTGGTGGCCACCTCCACCCCCGTCTAAGAGCGATTGCCACAGCTAGCTTC
ATCCGGGTAGCATCGGCGAGGAGCTTTTCTGGCGTGGGGAGTGACCTCGC
TTTTGCTGTGGTCAAGAGGGCACCACCGTCCTCCGCGTGGATTGGCCGTG
CCTCTTGCGCCAGGTGAGAGCCAGGGTCAATGGGAGAGAGGGGGGTATGT
TGGTGACGACTCGGTTCCATGGGTTGCGCGCGGAAAGTTCGACTGTTCGA
TTTGTGGTAGCCACTACTTTTGTCGCGGCTCTACTTCTGGAAAAATGGAG
CTGCCTGACACCGTACATGACATAAGATATCACCCCCACTTGATCGGTGT
TCAGCGCTCGATTGCTCGTCACCAGACAGAGTGATGGCGGCGTTGAACCC
GTCTCATCGGGGACTTCTTTTTTTTTCGAATGTGCGTCGCAGAGTATGAC
GTCCTCTTCTTCGTCGTGGAGTAGTCGGGCTGTCAGAATCAGCCCAGGAG
GTGTGATGTGTGACCTACTTGTAGACTGCATTTGTGCAGCACTGACTGGG
CCTCCGTCGAGCGCACCACATGTAGGCATGCAGGATATGCTTCGACGAAG
TGTGTGAAAGACACCGTAGACTTGTTTCGGTGGACACTTGATTCGCTGGG
TACAAAATCGGTGACTTCATTGTGCTGTACACTCCACAGCAGCGGTGACG
GCCACCGTGTTCGGAACATTGTCTGATGTCCCTCGAAGTATCCTGCCGTG
CCAATGCTCGCCATAGCACCCACCCTTTCAATCTATTGCCGTTTGCATAC
CCAGACCCATGCTAAAGGGACTTTTAAACCGCTACACGCTCGATTCACCT
CCCTCCCCCCGCGCAGCTCTCGCAGCAGTAGCTGCAGCGTCACCCCTAGC
TCTCGCATAGCCACCGTTCTTCGCCACATGTCGTCCAATCCGGGAGGAGG
GGAGGAAGAGAAGGCCAAGGCTGTCGCAGCAGCAGCAGCCGGTGGAGATG
GGGGCGAGGCGACGATCTTCGACAAGATCATCTCGAAAGACATCCCGGCA
GACATCATCCACGAGGACGAGCTCTGCCTGGCGTTCAAGGACATCAGCCC
ACAGGTGATACATATACCCAAACTTAAGCGACAGGCATGAGCTCGTTTTT
GCCCCCCGTGCGACGTCGAGTCTTACATCGTCGGCAAAGCGGCGGTGGAA
GCGATACGCGCCTACCTAGGGTATATTCTAAGAGAACACACCGTCACCTG
AGAGTATATTTATCATGTTTTTTGGTTAATATGTTTGTGTGAGGAGTGTG
ATATCTTGTGTCGTACTCTATTAACGGTAGGCGCTTGCACGTCTCGGCAG
TGCTATCGTACATAGAGACATAGAGTAGCGCTCATTCCGGGGTTTGACGG
TAACGCTCATTCCGGGCTTTTTTGTGGTCGACGTGCATGACGCCTCCCGA
CGCTGCTGCTGTTTTGACCTTGGTTTGTTCCGCTTGTCGCTGCTGCACAC
AGGCGCCGGTGCACTTTTTGGTCATCCCGAAGAGCCGCGACGGCCTGACG
CAGCTCAGCAAGGCCGTCGAAAGCAACAAGGCCTTGCTCGGCCACCTCAT
GTTCGTCGCCCAGAAGGTCGCCAAGGAGCAGGTGGGGAGCCAGTAGTACA
CGGCAGCAGCACGGGGCTAAAGCCGTATCGTCTTTGCTCGCCGGTGGTGT
TGGTCGGGATGGACAGACGGTTGGCACAGACTCGGGTTATTGCTGCAGCT
TGTACACGTAATGGTAGCTCGCGCTACACGACACCTGTACAGAGTGTTAC
TACAAGTGTTCAGGGAGCAACCTTCAGAATGCAACGGGTTTGTTATTTTC
GCCGTTTACCCGTTGGACAATTACCTCACCGCATCTGGTCACCCTCCCGT
CTGGTTACCGTTGTCAAAGCAGTTACAGTAGAGGTGCCTGTTGAAGGCCG
CTTATTTAATGTCGGTTGCCCTATTAAAGCCCGGTGAAATCGCTTGGCAC
AGATGGAATCAGTATTCAAGTTGTGTTCTACTCTGAATAGTGCCGGGTAC
ACGATATAAAAGGCCTGTGTTTTCCCTTGACCATGGTGGCCTTAAACAGG
AACCTCTACTGTACCGCATATACTCCAAAGCGTGACCCGCTACGCTGCCG
ATCGACCAACCTCACCAAGCCAATCAAGCGCCCTTTTTTTTGGAAAAACT
GCGCATGAACCAGGGTCTCGACGAAGGCTTTCGAGTGGTGGTCAACGATG
GGGTGCAGGGCTGTCAGACCGTCTACCACCTCCACATCCACGTCATTGTG
AGTGCAGCCCGCGGCACAAGGATGACGACTGGCATGTTGTCCATCCCCAA
GAATACAAGAAAAGTAGACACCACAGCAGGACGTGCAGGGGGCCCCATTT
TCTCAAAATACAGCGTAGACTTTTTTTGTTGGGGGGGGGGGGGGTTGCTC
GCATAGACAAGTAGCCTTCGCAGGGTTTTGTTATTCAGGAAGAATGTTGG
ACAAAGCATGCAATCGGGAAAGTTGGGTTAAGGAATAGGGTCTGCGTATC
CCCTTCCTGTTGTATCTTCCTCAGAATACTAGAGTTGCCGCTAAGGCGGT
CCCGCGGAGAGGGAGCGTTCTCTTGGCCGAAGCCCAGCTGATGCGTTCGA
GTGATTTGTGTAGGCCGATGATGTGTGCTAGTTTCTCTGGAGACGCCCAG
ACACGTAGCCTTTATTCCGCCGTCCTGCCGATACACAGGGCTGCTGCTAC
TGGTTATGACACTATGGCTGATATTGTTGCTGACTTTTCGTCACCCTGTC
ATCTTCTGGTTCTCGCTCGGTCCTGCTTTTCGTGTGTGCAGGGGGGACGG
CAGCTGAAGTGGCCGCCAGGCTGAGCTGCCCGATTTCTCCACCTCGCGAC
GGGGAATCGAAATCGTCGTATCAAGCTTACAAAGGGGCACCAAGCGGGCG
GCCGCTCTCTGCAGTGGAGATGAACTTTCTTCACCTAGATCACTCTCTTG
TTTGCTAGATCGCCTGGCGTTGCCGCCGGCCGTAGTCATGCGGTCGGAAA
TTGTGCAAGTGGTTGATGTTTTTCGCTGGGCGCAGGTTTGGGTGTGGTCC
CTTGCAGCGGGGAAGCGTCCGTCGGCGCAATACGATGGGACCCGGAACTA
TAGATTTTTGCGGCACGTCGATACGTTAACCTTGGCGAAATGGTTGTTCG
TTGTGTAGGGTCAGAGACGAGTGCTCTGAAAGCTGTTGTCGGTGTTGGGA
CCAAAGCTGACGAACGAACGATGTAGATGCCATCTACCCCCCCCTCGAGC
TGTTGTCGCTAAAATCTAGGATGCTGGGTGCCGGTAGAACTCCGCTTTCT
TGCCGACGTCGACGTCGTGGTTCTCACACTTTCTTGCGAGAGAGGTACCC
TTTCGGCCCTTAGGGGGTTATACTTCCGTCGTTGACAGCAGGCGTCGGCT
ACGCAGAATTCGCCTGCTGTTGTTATGGAGACACTGCTGCTGTGGCTTCT
AGACGGAACCATCGATCTCTCGGCAGAGAGACCACGATTGGAGAGAACGT
CTTCAGCAGGGAGACCACATTTGGAGAGAGCAATGGGCCACAGTTGTCGT
TGTTGATGATAGATAGCGTCTGGTCAGTGACATCACGCGTGGCTCGTTGT
TTGGGGCCGTCACGCGCTTTTGGCCGATTCAGAACTCGGCGTTCTACGCA
CCGATATTTTCTCTGTGACTATATGATGCATTTCGGGCCGCCACCCACAA
CCCA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1439:6851..10854-

>mRNA_E-fasciculatus_F_contig1439.3192.1 ID=mRNA_E-fasciculatus_F_contig1439.3192.1|Name=mRNA_E-fasciculatus_F_contig1439.3192.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=912bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1439:6851..10854- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGTCGTCCAATCCGGGAGGAGGGGAGGAAGAGAAGGCCAAGGCTGTCGC
AGCAGCAGCAGCCGGTGGAGATGGGGGCGAGGCGACGATCTTCGACAAGA
TCATCTCGAAAGACATCCCGGCAGACATCATCCACGAGGACGAGCTCTGC
CTGGCGTTCAAGGACATCAGCCCACAGATGTCGTCCAATCCGGGAGGAGG
GGAGGAAGAGAAGGCCAAGGCTGTCGCAGCAGCAGCAGCCGGTGGAGATG
GGGGCGAGGCGACGATCTTCGACAAGATCATCTCGAAAGACATCCCGGCA
GACATCATCCACGAGGACGAGCTCTGCCTGGCGTTCAAGGACATCAGCCC
ACAGGCGCCGGTGCACTTTTTGGTCATCCCGAAGAGCCGCGACGGCCTGA
CGCAGCTCAGCAAGGCCGTCGAAAGCAACAAGGCCTTGCTCGGCCACCTC
ATGTTCGTCGCCCAGAAGGTCGCCAAGGAGCAGGCGCCGGTGCACTTTTT
GGTCATCCCGAAGAGCCGCGACGGCCTGACGCAGCTCAGCAAGGCCGTCG
AAAGCAACAAGGCCTTGCTCGGCCACCTCATGTTCGTCGCCCAGAAGGTC
GCCAAGGAGCAGGGTCTCGACGAAGGCTTTCGAGTGGTGGTCAACGATGG
GGTGCAGGGCTGTCAGACCGTCTACCACCTCCACATCCACGTCATTGTGG
GTCTCGACGAAGGCTTTCGAGTGGTGGTCAACGATGGGGTGCAGGGCTGT
CAGACCGTCTACCACCTCCACATCCACGTCATTGTGGGGCGGCCGCTCTC
TGCAGTGGAGATGAACTTTCTTCACCTAGATCACTCTCTTGTTTGCTAGG
GGCGGCCGCTCTCTGCAGTGGAGATGAACTTTCTTCACCTAGATCACTCT
CTTGTTTGCTAG
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