mRNA_E-fasciculatus_F_contig14385.3188.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14385.3188.1 vs. uniprot
Match: D8LIB1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIB1_ECTSI) HSP 1 Score: 426 bits (1095), Expect = 4.760e-150 Identity = 208/213 (97.65%), Postives = 210/213 (98.59%), Query Frame = 1
Query: 1 DDVLTEQLKTGDVLLFSRRWTQMLPAGAALSVMKRSVFDSRFDHAGVVVADRFGTPHVAEVTYTGIKLRRFDERILRSKCNEIMLIPVNFKCSEETRAKVERHIKGLTYREPIANTLWIDLLGVLKLKTTKPEEWGKPPKYVTEPPIIGKIVPASPAVQLVMSCLDMAGAADGEAVSEWKYPLAITPKDLENCEVPLKEGANFGEPHTVRVRQ 639
DDVLTEQLKTGDVLLFSRRWTQMLPAGAALSVMKRSVFDSRFDHAGVVVADRFGTPHVAEVTYTGIKLRRFDERILRSKCNEIMLIPVNFKCSEETRAKVERH+KGLTYREPIANTLWIDLLG LKLKTTKP EWGKPPKYVTEPPIIGKIVPASPAVQLVMSCLDMAGAADG AV+EWKYPLAITPKDLENCEVPLKEGANFGEPHTVRVRQ
Sbjct: 53 DDVLTEQLKTGDVLLFSRRWTQMLPAGAALSVMKRSVFDSRFDHAGVVVADRFGTPHVAEVTYTGIKLRRFDERILRSKCNEIMLIPVNFKCSEETRAKVERHVKGLTYREPIANTLWIDLLGALKLKTTKPGEWGKPPKYVTEPPIIGKIVPASPAVQLVMSCLDMAGAADGAAVAEWKYPLAITPKDLENCEVPLKEGANFGEPHTVRVRQ 265
BLAST of mRNA_E-fasciculatus_F_contig14385.3188.1 vs. uniprot
Match: A0A835ZIB1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIB1_9STRA) HSP 1 Score: 134 bits (336), Expect = 5.590e-35 Identity = 84/222 (37.84%), Postives = 125/222 (56.31%), Query Frame = 1
Query: 1 DDVLTEQLKTGDVLLFSRRWTQMLPAGAALSVMKRSVFDSRFDHAGVVVADRFGTPHVAEVTYTGIKLRRFDERILRSKCNEIMLIPVNFKCSEETRAKVERHIKGLTYREPIA-----NTLWIDLLGVLK--LKTTKPEEWGKPPKYVTEPPIIGKIVPASPAVQLVMSCLDMAGAADGEAVSEWKYPLAI-TPKDLENCEVPLKEGANF--GEPHTVRVR 636
DD+L ++LKTGD+LLF R W M P AAL++ R+VF++R+DH G+V+ DRFG P V EVT G++LRRFDER+ S+ +EI+ +P+ +E R K ER+ + LT +A ++ +L G+LK L G P + + G+ + AS LV++ LD G D AV P + +P+DL +PL G + G+ VR+R
Sbjct: 44 DDILADKLKTGDLLLFRRNWALMQPPAAALALAARAVFNTRYDHVGLVIKDRFGVPLVLEVTQLGLRLRRFDERVSWSRSDEIVALPLRAAPPDEARVKAERYARSLTPERRLAWAQPSQSMSAELAGLLKYWLANRAARRRGTSP----DAKLWGEGLVASRDAALVLATLDKMGLVDLAAVEREVAPAQLLSPRDLVEGRLPLTGGNAYLAGQELLVRLR 261
BLAST of mRNA_E-fasciculatus_F_contig14385.3188.1 vs. uniprot
Match: A0A7J7IKN1_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IKN1_9RHOD) HSP 1 Score: 73.2 bits (178), Expect = 1.940e-11 Identity = 40/118 (33.90%), Postives = 64/118 (54.24%), Query Frame = 1
Query: 22 LKTGDVLLFSRRWTQMLPAGAALSVMKRSVFDSRFDHAGVVVADRFGTPHVAEVTYTGIKLRRFDERILRSKCNEIMLIPVNFKCSEETRAKVERHIKGLTYREPIANTLWIDLLGVL 375
L GD++LF+RR M P GA + + +++ +SR+DH G+VV G+ H+ E +G+ LR DERI RS+ NEI ++ ++ R ++E H P N L+ V+
Sbjct: 90 LDAGDIVLFNRRCLAMAPLGALICAVAKAMSNSRWDHVGIVVRKEDGSLHLLEANLSGVTLRPLDERIRRSRSNEIAFRRLSIVRTDRFRRELE-HFAEQVLETPYKNDFGAMLVSVI 206
BLAST of mRNA_E-fasciculatus_F_contig14385.3188.1 vs. uniprot
Match: M1VD17_CYAM1 (Similar to mitochondrial calcium-dependent solute carrier n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1VD17_CYAM1) HSP 1 Score: 73.2 bits (178), Expect = 1.980e-11 Identity = 41/118 (34.75%), Postives = 64/118 (54.24%), Query Frame = 1
Query: 22 LKTGDVLLFSRRWTQMLPAGAALSVMKRSVFDSRFDHAGVVVADRFGTPHVAEVTYTGIKLRRFDERILRSKCNEIMLIPVNFKCSEETRAKVERHIKGLTYREPIANTLWIDLLGVL 375
L GD++LF+RR M P GA + + +++ +SR+DH G+VV G+ H+ E +G+ LR DERI RS+ NEI ++ +E R ++ H P N L L+ V+
Sbjct: 92 LDAGDIVLFNRRCLAMAPLGALICAVAKAMSNSRWDHVGIVVRKEDGSLHLLEANLSGVTLRPLDERIRRSRSNEIAFRRLSIIRTERFRTEL-LHFAEQVLETPYKNDLGAMLVSVI 208
BLAST of mRNA_E-fasciculatus_F_contig14385.3188.1 vs. uniprot
Match: A0A7S3XLF3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XLF3_HETAK) HSP 1 Score: 72.0 bits (175), Expect = 2.060e-11 Identity = 36/92 (39.13%), Postives = 55/92 (59.78%), Query Frame = 1
Query: 22 LKTGDVLLFSRRWTQMLPAGAALSVMKRSVFDSRFDHAGVVVADRFGTPHVAEVTYTGIKLRRFDERILRSKCNEIMLIPVNFKCSEETRAK 297
L+TGD++ F R + P LS + + FD GV++ DR+GTPHV E +++GI L R+D RI S EI+L+P+ + S E++ K
Sbjct: 52 LRTGDIIFFRRNPFMLQPLQGILSWATKLLTGCDFDQCGVILNDRYGTPHVFEFSHSGITLTRYDHRIKLSMAEEIVLLPLIPESSSESKTK 143
BLAST of mRNA_E-fasciculatus_F_contig14385.3188.1 vs. uniprot
Match: A0A6G0WTL4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WTL4_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 1.380e-10 Identity = 35/107 (32.71%), Postives = 60/107 (56.07%), Query Frame = 1
Query: 1 DDVLTEQLKTGDVLLFSRRWTQMLPAGAALSVMKRSV--FDSRFDHAGVVVADRFGTPHVAEVTYTGIKLRRFDERILRSKCNEIMLIPVNFKCSEETRAKVERHIK 315
DDV+++ LKTGD++LF R M P + V + S+F+H G ++ + G V E TY+G+K R + RIL S +I+++P+ K ++E A + ++
Sbjct: 47 DDVMSDTLKTGDLILFRRNCAYMQPMDGLGCFLTSQVDQWKSQFNHCGFILVNHVGDKFVVEETYSGVKCRPYSARILTSLSTDIVVVPLRVKRTKEMEAAAAQFVQ 153
BLAST of mRNA_E-fasciculatus_F_contig14385.3188.1 vs. uniprot
Match: A0A485K7A3_9STRA (Aste57867_325 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K7A3_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 4.990e-10 Identity = 56/217 (25.81%), Postives = 93/217 (42.86%), Query Frame = 1
Query: 1 DDVLTEQLKTGDVLLFSRRWTQMLPAGAALSVMKRSV--FDSRFDHAGVVVADRFGTPHVAEVTYTGIKLRRFDERILRSKCNEIMLIPVNFKCSEETRAK--VERHIKGLTYREPIANTLWIDLLGVLKLKTTKPEEWGKPPKYVTEPPIIG-KIVPASPAVQLVMSCLDMAGAADGEAVSEWKYPLAITPKDLEN-CEVPLKEGANFGEPHTVRV 633
DD++++ LKTGD++LF R M P AA + V + S+++H G + + G + E TY+G+K R + RIL S +I+++P+ E AK +E ++ + R ++N L + +T P K P PA L+ G + S + P T KD V L + A+F +R+
Sbjct: 47 DDIMSDTLKTGDLVLFRRNCAYMQPLDAASCFLTGKVESWKSQYNHCGFIFVNHIGDKFIVEETYSGVKCRPYSARILTSMSTDIVVVPLRRTKEMELAAKQFIEENVNRPS-RFSLSNVL----------------------EQLTSPGASADKSTPIFPAAGLIAEVYQRMGLLPESSSSGYLSPNKCTIKDWSQFARVKLLQDAHFDRRLQIRL 240
BLAST of mRNA_E-fasciculatus_F_contig14385.3188.1 vs. uniprot
Match: A0A7S3HD07_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HD07_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 1.030e-9 Identity = 33/90 (36.67%), Postives = 57/90 (63.33%), Query Frame = 1
Query: 1 DDVLTEQLKTGDVLLFSRRWTQMLPAGAALSVMKRSVFDSRFDHAGVVVADRFGTPHVAEVT-YTGIKLRRFDERILRSKCNEIMLIPVN 267
DD++ + L++GDV+LFSR+W A L + + + +DH+G++V + GTP+V E T G++ RRF+ERI S + I+++ +N
Sbjct: 51 DDMVADSLRSGDVVLFSRKWYNYHLPTALLVKAQEAFYGGEYDHSGIIVM-KAGTPYVLETTPIRGVQCRRFEERIRHSASSHIVVLTLN 139
BLAST of mRNA_E-fasciculatus_F_contig14385.3188.1 vs. uniprot
Match: W4FI40_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FI40_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 1.340e-9 Identity = 35/110 (31.82%), Postives = 59/110 (53.64%), Query Frame = 1
Query: 1 DDVLTEQLKTGDVLLFSRRWTQMLPAGAALSVM--KRSVFDSRFDHAGVVVADRFGTPHVAEVTYTGIKLRRFDERILRSKCNEIMLIPVNFKCSEE----TRAKVERHI 312
DD+L++ L+TGD++LF R M PA A + + ++ ++H G + + G V E TY+G+K R + RI+ S +I ++P+ K + E R VE H+
Sbjct: 47 DDILSDTLQTGDIVLFRRNCAYMQPADAVSCFLGDRVPIWQGPYNHCGFIYVNHIGDKFVVEETYSGVKCRPYSARIITSLSTDIAVVPLRVKRTPEMQMAVRDFVEEHV 156
BLAST of mRNA_E-fasciculatus_F_contig14385.3188.1 vs. uniprot
Match: A0A482SEX3_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SEX3_9ARCH) HSP 1 Score: 64.3 bits (155), Expect = 5.890e-9 Identity = 46/133 (34.59%), Postives = 73/133 (54.89%), Query Frame = 1
Query: 1 DDVLTEQLKTGDVLLFSRRW-TQMLPAGAALSVMK-RSVFDSRFDHAGVVVADRFGTPHVAEVTYT-GIKLRRFDERILRSKCNEIMLIPVNFKCSEETRAKVERHIKGLTYR-EPIANTLWIDLLGVLKLKT 387
DD L++ L+TGD+L+ R+W Q LP AL+V+ R +FD+ FDH GV++ D+ G V E + G K+ F +RI S+ ++L+P++ + + V RH L + E +A GV KL +
Sbjct: 32 DDQLSDYLQTGDILVMKRKWHLQYLPV--ALNVLLYRHLFDTEFDHVGVILTDKLGKAFVMERSALWGHKVTPFHQRITHSEAELMVLLPLSPRDANLKAESVLRHNAHLDFSSELVAYPSCFLQYGVFKLSS 162 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14385.3188.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14385.3188.1 >prot_E-fasciculatus_F_contig14385.3188.1 ID=prot_E-fasciculatus_F_contig14385.3188.1|Name=mRNA_E-fasciculatus_F_contig14385.3188.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=214bp DDVLTEQLKTGDVLLFSRRWTQMLPAGAALSVMKRSVFDSRFDHAGVVVAback to top mRNA from alignment at E-fasciculatus_F_contig14385:1102..3158+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14385.3188.1 ID=mRNA_E-fasciculatus_F_contig14385.3188.1|Name=mRNA_E-fasciculatus_F_contig14385.3188.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2057bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14385:1102..3158+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14385:1102..3158+ >mRNA_E-fasciculatus_F_contig14385.3188.1 ID=mRNA_E-fasciculatus_F_contig14385.3188.1|Name=mRNA_E-fasciculatus_F_contig14385.3188.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1284bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14385:1102..3158+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |