prot_E-fasciculatus_F_contig1438.3185.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1438.3185.1
Unique Nameprot_E-fasciculatus_F_contig1438.3185.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length257
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1438.3185.1 vs. uniprot
Match: D8LKY8_ECTSI (Pleckstrin homology (PH) domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKY8_ECTSI)

HSP 1 Score: 177 bits (450), Expect = 3.830e-47
Identity = 112/158 (70.89%), Postives = 114/158 (72.15%), Query Frame = 0 
Query:    1 MPSLGLGVGSALAACWGVQVQEANDHDENSRPTEFDLSNSEEVEVEERIVVRKPPPVLVAMSRGTSATSSTVGGAGDYGEYDEGFGDDIRSAAGSSSRSXXXXXSSRDSSLFLAAVSPSRVPPPLVSVASSVSHPPVSMASSVVSGGSFSNPWLSPTP 158
            MPSL LGVGSALAACWGVQ  E ND+DENSRPTEFDL NSEEVEVEERIVVRKPPPVLVAMSRGTSAT             DE FGDD RSAAGSS        SSRDSSL L AVSPSRVPPPLVSVAS  + PPVS ASS   GG    PW  P P
Sbjct:  893 MPSLRLGVGSALAACWGVQ--ETNDNDENSRPTEFDLGNSEEVEVEERIVVRKPPPVLVAMSRGTSATXXXXXXXXXXXXXDEVFGDDARSAAGSSGSG-----SSRDSSLLLTAVSPSRVPPPLVSVASWGTLPPVSRASSCSLGGLVLQPWAIPHP 1043
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1438.3185.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKY8_ECTSI3.830e-4770.89Pleckstrin homology (PH) domain-containing protein... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..256
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.47

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1438contigE-fasciculatus_F_contig1438:1065..1835 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1438.3185.1mRNA_E-fasciculatus_F_contig1438.3185.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1438 69..2734 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1438.3185.1 ID=prot_E-fasciculatus_F_contig1438.3185.1|Name=mRNA_E-fasciculatus_F_contig1438.3185.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=257bp
MPSLGLGVGSALAACWGVQVQEANDHDENSRPTEFDLSNSEEVEVEERIV
VRKPPPVLVAMSRGTSATSSTVGGAGDYGEYDEGFGDDIRSAAGSSSRSG
SGSGSSRDSSLFLAAVSPSRVPPPLVSVASSVSHPPVSMASSVVSGGSFS
NPWLSPTPNQQQQAGSAEPPPGDSMSWLQPLPPPPPPPPRKDGGAKAESP
WEPLSSSSSGAGAAAGRRGGMGLAYPSGRWVQTPQTGEILEEQPQARAEP
KDGGRV*
back to top