prot_E-fasciculatus_F_contig14378.3184.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14378.3184.1
Unique Nameprot_E-fasciculatus_F_contig14378.3184.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length67
Homology
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BLAST of mRNA_E-fasciculatus_F_contig14378.3184.1 vs. uniprot
Match: A0A7S1FUS0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FUS0_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 6.580e-8
Identity = 20/28 (71.43%), Postives = 24/28 (85.71%), Query Frame = 0 
Query:    1 TCGSAAARGHLDILKWARNHGCEWDETT 28
            TC +AA +GHLD+LKWAR HGC+WDE T
Sbjct:    2 TCSNAAEKGHLDVLKWARAHGCDWDEWT 29
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BLAST of mRNA_E-fasciculatus_F_contig14378.3184.1 vs. uniprot
Match: A0A7S0T4I3_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0T4I3_9CHLO)

HSP 1 Score: 47.4 bits (111), Expect = 4.350e-5
Identity = 18/28 (64.29%), Postives = 20/28 (71.43%), Query Frame = 0 
Query:    1 TCGSAAARGHLDILKWARNHGCEWDETT 28
            TC  AA  GHL++LKWAR H C WDE T
Sbjct:    1 TCECAAEGGHLEVLKWAREHDCPWDELT 28
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14378.3184.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7S1FUS0_9STRA6.580e-871.43Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A7S0T4I3_9CHLO4.350e-564.29Hypothetical protein (Fragment) n=1 Tax=Mantoniell... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13637Ank_4coord: 5..44
e-value: 8.7E-5
score: 23.0
NoneNo IPR availablePANTHERPTHR46586FAMILY NOT NAMEDcoord: 4..67
NoneNo IPR availablePANTHERPTHR46586:SF3ANKYRIN REPEAT-CONTAINING PROTEINcoord: 4..67
NoneNo IPR availableSUPERFAMILY140860Pseudo ankyrin repeat-likecoord: 5..57
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 3..67
e-value: 9.2E-6
score: 26.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14378contigE-fasciculatus_F_contig14378:45..675 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14378.3184.1mRNA_E-fasciculatus_F_contig14378.3184.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14378 45..675 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14378.3184.1 ID=prot_E-fasciculatus_F_contig14378.3184.1|Name=mRNA_E-fasciculatus_F_contig14378.3184.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=67bp
TCGSAAARGHLDILKWARNHGCEWDETTCNNAAINGHLKVLQWLRSNGCP
WDSYTCSSAAGMGHLDV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf