prot_E-fasciculatus_F_contig14375.3181.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14375.3181.1
Unique Nameprot_E-fasciculatus_F_contig14375.3181.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length202
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig14375.3181.1 vs. uniprot
Match: D7G8V3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8V3_ECTSI)

HSP 1 Score: 234 bits (596), Expect = 1.240e-72
Identity = 133/163 (81.60%), Postives = 138/163 (84.66%), Query Frame = 0 
Query:   43 PPTSRLLDESGEDVRPFIERNPFQPRASSCLCPEEGGQHAGVAFPPPARLSFLQAVELVLTTGPLSRE-RRDDGRGGAPVAQVADASGEASPSADRVAPPTAGR---GSPTFEGFGDNVEASVVASVLELLRRATAAAERWGLSPRDRERLALWSEAAAATAS 201
            P  SRLLDESGEDVRPFIERNPFQPRASS LC EE  Q   +   PPARLSFLQAVELVLTTGPLSRE R DDGRGG+PV QVADAS EASPS + VAPPTAGR   G  TFEGFG NVEASVVASVLELLRRATAAAERWGLSP++RERLALWS AAAATAS
Sbjct:  236 PGDSRLLDESGEDVRPFIERNPFQPRASSWLCTEEEEQQDEIVASPPARLSFLQAVELVLTTGPLSREWRDDDGRGGSPVVQVADASEEASPSGEGVAPPTAGRCEGGRSTFEGFGKNVEASVVASVLELLRRATAAAERWGLSPQERERLALWSSAAAATAS 398
[Close]
BLAST of mRNA_E-fasciculatus_F_contig14375.3181.1 vs. uniprot
Match: A0A6H5KMN8_9PHAE (FCP1 homology domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMN8_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 4.180e-24
Identity = 64/85 (75.29%), Postives = 65/85 (76.47%), Query Frame = 0 
Query:   47 RLLDESGEDVRPFIERNPFQPRASSCLCPE--EGGQHAGVAFPPPARLSFLQAVELVLTTGPLSRE-RRDDGRGGAPVAQVADAS 128
            RLLDESGEDVRPFIERNPFQPR SS LC E  E  Q   VA PP   LSFLQAVELVLTTGPL RE R DDGRGG+PV   ADAS
Sbjct:  363 RLLDESGEDVRPFIERNPFQPRPSSWLCTEKEEEQQDESVASPP-TTLSFLQAVELVLTTGPLFREWRDDDGRGGSPVVHEADAS 446
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14375.3181.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G8V3_ECTSI1.240e-7281.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KMN8_9PHAE4.180e-2475.29FCP1 homology domain-containing protein n=1 Tax=Ec... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14375contigE-fasciculatus_F_contig14375:623..1228 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14375.3181.1mRNA_E-fasciculatus_F_contig14375.3181.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14375 253..1651 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14375.3181.1 ID=prot_E-fasciculatus_F_contig14375.3181.1|Name=mRNA_E-fasciculatus_F_contig14375.3181.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=202bp
MYVHVSNVQPTENSQRPTTRSCSCPRPGARPFPPILLCTRASPPTSRLLD
ESGEDVRPFIERNPFQPRASSCLCPEEGGQHAGVAFPPPARLSFLQAVEL
VLTTGPLSRERRDDGRGGAPVAQVADASGEASPSADRVAPPTAGRGSPTF
EGFGDNVEASVVASVLELLRRATAAAERWGLSPRDRERLALWSEAAAATA
S*
back to top