prot_E-fasciculatus_F_contig14360.3173.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14360.3173.1
Unique Nameprot_E-fasciculatus_F_contig14360.3173.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length215
Homology
BLAST of mRNA_E-fasciculatus_F_contig14360.3173.1 vs. uniprot
Match: D8LI19_ECTSI (Circadian RNA-binding protein CHLAMY 1 subunit C1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI19_ECTSI)

HSP 1 Score: 396 bits (1018), Expect = 2.690e-134
Identity = 202/213 (94.84%), Postives = 208/213 (97.65%), Query Frame = 0
Query:    3 EEEDDDVNSELVAGAFGAKERTKHGDYSAFEHPLERRANEAKQNDCKDLNVLNAILQEAHGEVGLGKMKKMIKKMVKRINETREEQKQLRQQSLLKPKREVISQKLHPAYASKEPTFSSFAPPTIPDKVPDAMLDIPPNVVGWVIGKNGARIIDIQSKTNAAMWMNQNFPDGVMRKLHIHGNKQQVEAAIAEVEFLMKSAPVNTPRPGKMGPE 215
            EEE+DD+NSELVAGAFGAKERTKHGDYSAFEHPLERRANEAKQNDCKDLNVLNAILQEAHGEVGLGKMKKMIKKM+KRINETREEQKQLR QSLLKPKREV SQKLHPAYASK+PTFSSFAP TIPDKVPDAMLDIPPNVVGWVIGKNGARI DIQSKTNAAMWM+QNFPDGVMRKLHIHGNKQQVEAAI EVEFLMKSAPVNTPRPGKMGP+
Sbjct:   68 EEEEDDINSELVAGAFGAKERTKHGDYSAFEHPLERRANEAKQNDCKDLNVLNAILQEAHGEVGLGKMKKMIKKMIKRINETREEQKQLRTQSLLKPKREVSSQKLHPAYASKKPTFSSFAPSTIPDKVPDAMLDIPPNVVGWVIGKNGARINDIQSKTNAAMWMDQNFPDGVMRKLHIHGNKQQVEAAIDEVEFLMKSAPVNTPRPGKMGPK 280          
BLAST of mRNA_E-fasciculatus_F_contig14360.3173.1 vs. uniprot
Match: A0A6H5KMM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMM6_9PHAE)

HSP 1 Score: 385 bits (988), Expect = 2.620e-126
Identity = 194/207 (93.72%), Postives = 202/207 (97.58%), Query Frame = 0
Query:    9 VNSELVAGAFGAKERTKHGDYSAFEHPLERRANEAKQNDCKDLNVLNAILQEAHGEVGLGKMKKMIKKMVKRINETREEQKQLRQQSLLKPKREVISQKLHPAYASKEPTFSSFAPPTIPDKVPDAMLDIPPNVVGWVIGKNGARIIDIQSKTNAAMWMNQNFPDGVMRKLHIHGNKQQVEAAIAEVEFLMKSAPVNTPRPGKMGPE 215
            +NSELVAGAFGAKERTKHGDYSAFEHPLERRANEAKQNDCKDLNVLNAILQEAHGEVGLGKMKKMIKKMVKRINETREEQK+LR QS++KPKREV +QKLHPAYASKEPTFSSFAP TIPDKVPDAMLDIPPNVVGWVIGKNGARI DIQSKTNAAMWM+QNFPDGVMRKLHIHGNKQQVEAAIAEVEFLMKSAPVNTPRP +MGP+
Sbjct:  508 INSELVAGAFGAKERTKHGDYSAFEHPLERRANEAKQNDCKDLNVLNAILQEAHGEVGLGKMKKMIKKMVKRINETREEQKKLRTQSVVKPKREVSAQKLHPAYASKEPTFSSFAPSTIPDKVPDAMLDIPPNVVGWVIGKNGARINDIQSKTNAAMWMDQNFPDGVMRKLHIHGNKQQVEAAIAEVEFLMKSAPVNTPRPARMGPK 714          
BLAST of mRNA_E-fasciculatus_F_contig14360.3173.1 vs. uniprot
Match: A0A7S0S8D0_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0S8D0_9CHLO)

HSP 1 Score: 62.4 bits (150), Expect = 1.340e-8
Identity = 33/72 (45.83%), Postives = 46/72 (63.89%), Query Frame = 0
Query:  135 MLDIPPNVVGWVIGKNGARIIDIQSKTNAAMWMNQNFPDGVMRKLHIHGNKQQVEAAIAEVEFLMKSAPVNT 206
            ++D PP +VG VIGK G  I  +Q+++ A + ++QNFPDGV RK+ I G    VE A   VE L+K  PV +
Sbjct:   39 LVDCPPELVGRVIGKGGETIKGLQAQSGAHITIDQNFPDGVPRKISISGAVGCVEIASKLVEDLLKGGPVGS 110          
BLAST of mRNA_E-fasciculatus_F_contig14360.3173.1 vs. uniprot
Match: A0A7S0KCC2_MICPS (Hypothetical protein (Fragment) n=2 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0KCC2_MICPS)

HSP 1 Score: 63.5 bits (153), Expect = 2.860e-8
Identity = 44/109 (40.37%), Postives = 60/109 (55.05%), Query Frame = 0
Query:  113 ASKEPTFSSFAPPTIPDKVPDAMLDI-------PPNVVGWVIGKNGARIIDIQSKTNAAMWMNQNFPDGVMRKLHIHGNKQQVEAAIAEVEFLMKSAPVNTPRPGKMGP 214
            AS  PT +   PP  P+    A +DI       PP +VG VIGK G  I  +Q+++ A + ++QNFP+GV RK+ I G    V+ A   VE L+K  PV   R G +GP
Sbjct:   43 ASGSPTEAP--PPATPNPQSTAGMDITTNLVDCPPGLVGRVIGKGGETIKGLQAQSGAHITVDQNFPEGVPRKISISGPAGCVDIATKLVEDLLKGGPV---RSGSVGP 146          
BLAST of mRNA_E-fasciculatus_F_contig14360.3173.1 vs. uniprot
Match: A0A7S4RG89_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RG89_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 4.380e-6
Identity = 25/73 (34.25%), Postives = 48/73 (65.75%), Query Frame = 0
Query:  133 DAMLDIPPNVVGWVIGKNGARIIDIQSKTNAAMWMNQN-FPDGVMRKLHIHGNKQQVEAAIAEVEFLMKSAPV 204
            +A+L++ P +VGWVIGK G RI D+  +++A +W++Q+       R +++ G K  V+ A+  ++ L++ AP+
Sbjct:  217 EAILEMSPQIVGWVIGKGGQRIRDLMEESSAKIWIDQDCMTPAQYRVVYVSGLKNSVDLAVKRMQELVERAPI 289          
BLAST of mRNA_E-fasciculatus_F_contig14360.3173.1 vs. uniprot
Match: A0A7S1ZYU7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZYU7_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 4.870e-6
Identity = 25/73 (34.25%), Postives = 48/73 (65.75%), Query Frame = 0
Query:  133 DAMLDIPPNVVGWVIGKNGARIIDIQSKTNAAMWMNQN-FPDGVMRKLHIHGNKQQVEAAIAEVEFLMKSAPV 204
            +A+L++ P +VGWVIGK G RI D+  +++A +W++Q+       R +++ G K  V+ A+  ++ L++ AP+
Sbjct:  400 EAILEMSPQIVGWVIGKGGQRIRDLMEESSAKIWIDQDCMTPAQYRVVYVSGLKNSVDLAVKRMQELVERAPI 472          
BLAST of mRNA_E-fasciculatus_F_contig14360.3173.1 vs. uniprot
Match: D7FHT5_ECTSI (SAM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHT5_ECTSI)

HSP 1 Score: 53.9 bits (128), Expect = 6.340e-5
Identity = 33/87 (37.93%), Postives = 52/87 (59.77%), Query Frame = 0
Query:  123 APPTIPDKVPD---AMLDIPPNVVGWVIGKNGARIIDIQSKTNAAMWMNQNFPDGVMRKLHIHG-NKQQVEAAIAEVEFLMKSAPVN 205
            A PT+ ++ P     ++DI P VVGWVIG++GA I +++ ++   MW++Q        KL+I G +  ++ AA A V  L+  APVN
Sbjct:   20 AVPTVLERFPGFVRCVMDIAPEVVGWVIGRSGAHIKEMKHRSGCGMWVDQKD-----LKLYITGADMPRIHAAAALVGDLISKAPVN 101          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14360.3173.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D8LI19_ECTSI2.690e-13494.84Circadian RNA-binding protein CHLAMY 1 subunit C1 ... [more]
A0A6H5KMM6_9PHAE2.620e-12693.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S0S8D0_9CHLO1.340e-845.83Hypothetical protein (Fragment) n=1 Tax=Mantoniell... [more]
A0A7S0KCC2_MICPS2.860e-840.37Hypothetical protein (Fragment) n=2 Tax=Micromonas... [more]
A0A7S4RG89_9STRA4.380e-634.25Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A7S1ZYU7_9STRA4.870e-634.25Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
D7FHT5_ECTSI6.340e-537.93SAM domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 67..94
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 131..195
score: 11.573
IPR004087K Homology domainSMARTSM00322kh_6coord: 130..200
e-value: 1.6E-4
score: 31.0
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10coord: 130..215
e-value: 1.5E-12
score: 49.3
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 134..205
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 137..195
e-value: 4.5E-11
score: 42.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14360contigE-fasciculatus_F_contig14360:64..2716 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14360.3173.1mRNA_E-fasciculatus_F_contig14360.3173.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14360 64..2716 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14360.3173.1 ID=prot_E-fasciculatus_F_contig14360.3173.1|Name=mRNA_E-fasciculatus_F_contig14360.3173.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=215bp
DEEEEDDDVNSELVAGAFGAKERTKHGDYSAFEHPLERRANEAKQNDCKD
LNVLNAILQEAHGEVGLGKMKKMIKKMVKRINETREEQKQLRQQSLLKPK
REVISQKLHPAYASKEPTFSSFAPPTIPDKVPDAMLDIPPNVVGWVIGKN
GARIIDIQSKTNAAMWMNQNFPDGVMRKLHIHGNKQQVEAAIAEVEFLMK
SAPVNTPRPGKMGPE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004088KH_dom_type_1
IPR036612KH_dom_type_1_sf
IPR004087KH_dom