mRNA_E-fasciculatus_F_contig1436.3172.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_E-fasciculatus_F_contig1436.3172.1
Unique Name	mRNA_E-fasciculatus_F_contig1436.3172.1
Type	mRNA
Organism	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)

Homology

[Close]

BLAST of mRNA_E-fasciculatus_F_contig1436.3172.1 vs. uniprot
Match: D8LCP8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCP8_ECTSI)

HSP 1 Score: 522 bits (1344), Expect = 8.050e-181
Identity = 327/467 (70.02%), Postives = 344/467 (73.66%), Query Frame = 1

Query:    1 MSLPNTGHALLILLAALNSGFCQGSLHGVPFAGIGSVRPLRSASSSSFSQP----------------------------------------------------------------------NNTPAAVGDTALSNSSGVFTNLSALEEELVETLEVDEQVTVLGEVQLGELLCDSLVRAEDAPLLQFALSANETIIANQTSYTVVSGQTFTGGVGRRIWNGVVVDPEPAAEEAFPRGVSMTWGEVCDVETFSLKVSKHTVEGNTSVVKSVPCGLSGLEVCLVEVAYNFLPDKEPLRVGFNSTGQSTGVRRRLGDGNLGRGGHGRXXXXXXXXXXXXXXXXXXXXXXXXXXXDSGLRRKLQSDTVEIQVMVLYTNMSLDLMGVSDAQMETMVSAAISTVNVGFDNSIIGIDTATVYNGRLPYYQDYTEYSSTKLSALQENEEVKALRDEYGADIVLLVDYLQDACGIA 1191
            MSLP  GHALL+  AAL+SG CQ SLHGVPFAGIGSVRPLRSAS SSFS P                                                                       NT  AVGDT LSNSSGVFTN+SA+E+EL ETLEVDEQVTVLGEVQLGELLCDSLV+AEDAPLLQFALSANETIIAN+TSYTVVSG+TFTGGVGRRIWNGVV+DPEP A EAFPRGVSMTWGEVCDVETFSLKVSKHTVEGNTS VKSVPCGLSG+EVCLVEVA++FLP KEPLRVG NSTGQST VRRRLGDG LG G   R XXXXXXXXXXXXXXXXXXXXXXXXXX                 MVLYTNMSL LMGVSD QMETMVSAAISTVNVGF+NS IGI+T TVY GRLPYYQD  + SSTKLSAL+E+E V ALRDEYGADIVLLVDYL DACGIA
Sbjct:    1 MSLPTFGHALLVFFAALDSGLCQRSLHGVPFAGIGSVRPLRSASPSSFSSPLSTVLNGSISEIEGETTTNSTSLNSTADAVDSVATNSSWSSETDVSGSVWANSSXXXXSSSVVYALELISTNTSTAVGDTVLSNSSGVFTNVSAVEKELAETLEVDEQVTVLGEVQLGELLCDSLVQAEDAPLLQFALSANETIIANRTSYTVVSGETFTGGVGRRIWNGVVIDPEPDAGEAFPRGVSMTWGEVCDVETFSLKVSKHTVEGNTSAVKSVPCGLSGVEVCLVEVAFDFLPGKEPLRVGVNSTGQSTAVRRRLGDGILGGGSRDRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------MVLYTNMSLVLMGVSDVQMETMVSAAISTVNVGFENSNIGIETTTVYKGRLPYYQDCADDSSTKLSALREDEGVNALRDEYGADIVLLVDYLTDACGIA 456

[Close]

BLAST of mRNA_E-fasciculatus_F_contig1436.3172.1 vs. uniprot
Match: A0A6H5JBZ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBZ9_9PHAE)

HSP 1 Score: 262 bits (670), Expect = 2.510e-82
Identity = 168/219 (76.71%), Postives = 182/219 (83.11%), Query Frame = 1

Query:  535 ETFSLKVSKHTVEGNTSVVKSVPCGLSGLEVCLVEVAYNFLPDKEPLRVGFNSTGQSTGVRRRLGDGNLGRGGHGRXXXXXXXXXXXXXXXXXXXXXXXXXXXDSGLRRKLQSDTVEIQVMVLYTNMSLDLMGVSDAQMETMVSAAISTVNVGFDNSIIGIDTATVYNGRLPYYQDYTEYSSTKLSALQENEEVKALRDEYGADIVLLVDYLQDACGIA 1191
            +TFSLKVSKHTVEGNTS +KSVPCGLSG+EVCLVEVA++FLP KEPL VG NSTGQST VRRRLG+G  G G   +  XXXXXXXXXXXXXXXXXXXX           KLQS+ VE  V+VLYTNMSL LMGVSD QMETMVSAAISTVN+GF+NS IGI+T TVY GRLPY QDYT+ SSTKLS L+ENEEV ALRDEYGADIVLLVDYL DACGIA
Sbjct:   20 QTFSLKVSKHTVEGNTSTMKSVPCGLSGVEVCLVEVAFDFLPGKEPLGVGVNSTGQSTAVRRRLGNGMFGGGSRAKHQXXXXXXXXXXXXXXXXXXXX-----------KLQSNPVE--VLVLYTNMSLVLMGVSDVQMETMVSAAISTVNMGFENSHIGIETTTVYQGRLPYSQDYTDDSSTKLSDLRENEEVNALRDEYGADIVLLVDYLLDACGIA 225

[Close]

BLAST of mRNA_E-fasciculatus_F_contig1436.3172.1 vs. uniprot
Match: A0A6H5JF50_9PHAE (LNR domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF50_9PHAE)

HSP 1 Score: 228 bits (581), Expect = 3.700e-62
Identity = 148/418 (35.41%), Postives = 216/418 (51.67%), Query Frame = 1

Query:  172 VGDTALSNSSGVFTNLSALEEELVETLEVDEQVTVLGEVQLGELLCDSLVRAEDAPLLQFALSANETIIANQTSYTVVSGQTFTGGVGRRIWNGVVVDPEPAAEEAFPRGVSMTWGEVCDVETFSLKVSKHTVEGNTSVVKSVPCGL-SGLEVCLVEVAYNFLPDKEPLRVGFNSTGQST----GVR----RRLGDGNLGRGGHGRXXXXXXXXXXXXXXXXXXXXXXXXXXXDSGLRRKLQSDTVEIQVMVLYTNMSLDLMGVSDAQMETMVSAAISTVNVGFDNSIIG-IDTATVYNGRLPYYQ-DYTEYSST------KLSALQENEEVKALRDEYGADIVLLVDYLQDACGIAYILTNTYSTESEWAYAAVSPNCFDNLVIGRELGHNLGCANNREHSTIEMEYAHGYRYCSGT 1374
            V DT + +   +  +   +EE LVE LE DE   V+G+++LG+LLCDSL  A D+ LL+F +S+ ET+IA +TSY+ + G     G  R+ W G VVDPEP+   + PR VSMTW + CD+ETF LK+     +G+TS+  SVPC   S  E+C+VE+   F  + + +    +S+  ST    G R    RR+    +  G                                    R LQ  TV I V++ Y+  +    G+SDAQ+ T +   + T+N    NS I  ++   V+   LPY Q  Y    S       +L AL  N  V  LR+EY  D+V LV Y    CG+ YI    ++  +E+ ++ V  NCFDN     E+ HN+GC ++R++S  + EY HGYRYC+G+
Sbjct:  133 VKDTGVGHLHAIPEDEHQVEEGLVEVLETDELTAVMGDIELGDLLCDSLEDATDSSLLRFTISSTETVIAERTSYSSIDGNVLPDGNARKTWLGEVVDPEPSTN-SIPRTVSMTWTDPCDIETFLLKLVSRNSDGSTSIATSVPCSAGSSSEICMVELQKFFYDESDAVDTSQSSSSSSTSKYQGSRMLKERRVSTTFMEEGSRWSQGIPSD--------------------------RSLQGTTV-IDVLIFYSPEAASSEGISDAQLLTRIVEGMVTLNQAITNSAIADLEYRLVHVAELPYSQMTYDPIDSDDIDLEPELDALAANSAVNDLRNEYQGDLVQLVGYFPGTCGLGYI----FNGNAEFGFSLVGSNCFDNFSHTHEIAHNMGCYHDRDNSETQDEYRHGYRYCTGS 518

[Close]

BLAST of mRNA_E-fasciculatus_F_contig1436.3172.1 vs. uniprot
Match: A0A6H5JG69_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG69_9PHAE)

HSP 1 Score: 181 bits (460), Expect = 4.440e-50
Identity = 127/299 (42.47%), Postives = 138/299 (46.15%), Query Frame = 1

Query:    1 MSLPNTGHALLILLAALNSGFCQGSLHGVPFAGIGSVRPLRSASSSSFSQP----------------------------------------------------------------------NNTPAAVGDTALSNSSGVFTNLSALEEELVETLEVDEQVT--------------------------------------------------VLGEVQLGELLCDSLVRAEDAPLLQFALSANETIIANQTSYTVVSGQTFTGGVGRRIWNGVVVDPEPAAEEAFPRGVSMTWGEVCDVE 537
            MS+   GHALL+  A ++SG CQ SLHGVPFAGIGSVRPLRSAS SSFS P                                                                       NT AAVGDT LSNSSG FTN+SA+E+ELVETLEVDEQVT                                                  VLGEVQLGELLCD LV+AEDAPLLQFALSANE                        IWNGVV+DP P A+EAFPRGVSMTWGEVCD+E
Sbjct:    5 MSISTCGHALLVFFAGMDSGLCQRSLHGVPFAGIGSVRPLRSASLSSFSTPMSTVLNGSVSEIEGETATNSTSLNSTADAVDSIATNSSWSSETDVSVPVGANXXXXXXXXSVVYGLELISTNTSAAVGDTVLSNSSGAFTNVSAVEKELVETLEVDEQVTGDFACMWTISRCSGNNLCATTVQGKRRTVAYHVEHPNLVSPVDDEITNRSVLGEVQLGELLCDGLVQAEDAPLLQFALSANE------------------------IWNGVVIDPAPDADEAFPRGVSMTWGEVCDIE 279

[Close]

BLAST of mRNA_E-fasciculatus_F_contig1436.3172.1 vs. uniprot
Match: D8LC56_ECTSI (Peptidyl-Asp metalloendopeptidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC56_ECTSI)

HSP 1 Score: 116 bits (291), Expect = 7.850e-25
Identity = 103/404 (25.50%), Postives = 169/404 (41.83%), Query Frame = 1

Query:  304 LCDSLVRAEDAPLLQFALSANETIIANQTSYTVVSGQTFTGGVGRRIWNGVVVDPEPAAEEAFPRGVSMTWGEVCDVETFSLKVSKHTVEGNTSVVKSVPCGLSGLEVCLVEVAYNFLPDKEP-------LRVGFNSTGQSTGVRRRLGDGNLGRGGHGRXXXXXXXXXXXXXXXXXXXXXXXXXXXDSGLR----------------------------------RKLQSDTVEIQVMVLYTNMSL------DLMGVSDAQMETMVSAAISTVNVGFDNSIIGIDTATVYNGRLPYYQDYTEYSSTKLSALQENEEVKALRDEYGADIVLLVDYLQDACGIAYILTNTYSTESEWAYAAVSPNCFDNLVIGRELGHNLGCANNREH---STIEMEYAHGYRYC 1365
            +CD+L  A++A  L+F++ A +T+IA+  S+T              IW G V + E    +  PR +SMTW   C  + F +++     +G    + S+P   +G    L  V +N + + +        L++  +S G+ T +R+ +    L  G                               D+ +R                                  R L S+TV I V+VLYT  ++      D  G S AQME+ ++ A    N     S +      V+  + P+  D ++     + A+Q+NE V  LRDEYGAD+V L+ Y  + CG+ + + +  S  +++ Y+ V  NC  N     ELGHN G  +N+E+   S     Y + YR C
Sbjct:    1 MCDTLEDAKEAKALEFSIGAGQTVIADLVSFTT-------------IWTGTVKESEDF--DGLPRSISMTWTADCSTQNFVVQMISPAKDGGVDTMVSLPNPSNGENFLLATVHHNSIDEIDVEDDIGRRLQIA-DSVGEQTNLRQGVQRSALDDGSEILTPRRLLAKEAERGIERARLDDPDIDAKDNDIRQLQEYRSASPEGQEAFHERGLRRLSEDNVVMPGGRVLSSETV-IDVLVLYTEKAMLESDSGDGAGRSIAQMESDIATAYQGANNALSASGVNFSVRIVHMEQAPF--DESDSIVDDVRAIQKNEGVHKLRDEYGADLVQLIGYYLNTCGVGFTMGSPSSGFAQYGYSVVHTNCLSNFSHIHELGHNFGANHNKENAGGSDGVDAYNYAYRNC 385

[Close]

BLAST of mRNA_E-fasciculatus_F_contig1436.3172.1 vs. uniprot
Match: D7FTV1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTV1_ECTSI)

HSP 1 Score: 101 bits (252), Expect = 1.090e-20
Identity = 90/313 (28.75%), Postives = 133/313 (42.49%), Query Frame = 1

Query:  277 LGEVQLGELLCDSLVRAEDAPLLQFALSANETIIANQTSYTVVSGQTFTGGVGRRIWNGVVVDPEPAAEEAFPRGVSMTWGEVCDVETFSLKVSKHTVEGNTSVVKSVPCGL-SGLEVCLVEVAYNFLPDKEPLRVGFNSTGQSTGVRRRLGDGNLGRGGHGRXXXXXXXXXXXXXXXXXXXXXXXXXXXDSGLR--RKLQSDTVEIQVMVLYTNMSLDLMGVSDAQMETMVSAAISTVNVGFDNS-IIGIDTATVYNGRLPYYQ-DYTEYSST----KLSALQENEEVKALRDEYGADIVLLVDYLQDACGI 1188
            +G+++LGELLCDSL  A D+ LL+F +S+ ET+IA +TSY+ + G   + G+ R                                 +F LK+     +G+TS+V SVPC   S  E+C+VE+   F  + E +      T QS        D                                       GL   R LQ+ TV I V+++Y+  +    G+++AQ+ T +   + T+N    NS I G++   V    LPY Q  Y          +L AL  N  V  LRD+Y  D+V LV Y    CG+
Sbjct:   10 VGDIELGELLCDSLEDAADSSLLRFTISSTETVIAERTSYSSIDGSVLSDGITRM--------------------------------SFLLKLVSRNADGSTSIVTSVPCSAGSSSELCMVELEMFFHDESEAV-----DTTQSXXXXXXXKD---------------QGSRMLKEQRVSMTYTEEESLRSQGLPSDRSLQATTV-IDVLIVYSPEAAYARGIAEAQLLTRIVEGMVTLNQAITNSGIAGLEYRLVQVAELPYSQMTYVPSDDIDLKPELDALAANSNVTDLRDQYQGDLVQLVGYFPGTCGL 269

[Close]

BLAST of mRNA_E-fasciculatus_F_contig1436.3172.1 vs. uniprot
Match: D8LMP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMP1_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 4.340e-19
Identity = 58/162 (35.80%), Postives = 85/162 (52.47%), Query Frame = 1

Query:  226 LEEELVETLEVDEQVTVLGEVQLGELLCDSLVRAEDAPLLQFALSANETIIANQTSYTVVSGQTFTGGVGRRIWNGVVVDPEPAAEEAFPRGVSMTWGEVCDVETFSLKVSKHTVEGNTSVVKSVPCGL-SGLEVCLVEVAYNFLPDKEPLRVGFNSTGQST 708
            +EEELVE LE DE  TV+G+++LG+LLCDSL  A D+ LL+F +S+ ET+IA +TSY+ + G     G  R+                                TF LK+     +G+TS+V SVPC   S  E+C+VE+   F  + + +    +S+  ST
Sbjct:   65 VEEELVEVLETDELTTVVGDIELGDLLCDSLEDASDSSLLRFTISSTETVIAERTSYSSIDGSILPDGNTRK--------------------------------TFLLKLVSRNSDGSTSIVTSVPCSAGSSSEICMVELEKFFYDESDAVDTAQSSSSSST 194

[Close]

BLAST of mRNA_E-fasciculatus_F_contig1436.3172.1 vs. uniprot
Match: A0A839HE77_9GAMM (Fibronectin type III domain-containing protein n=1 Tax=Thiospirillum jenense TaxID=1653858 RepID=A0A839HE77_9GAMM)

HSP 1 Score: 96.3 bits (238), Expect = 1.660e-17
Identity = 59/169 (34.91%), Postives = 97/169 (57.40%), Query Frame = 1

Query:  886 IQVMVLYTNMSLDLMGVSDAQMETMVSAAISTVNVGFDNSIIGIDTATVYNGRLPYYQDYTEYSSTKLSALQEN-----EEVKALRDEYGADIVLLVDYLQDACGIAYILTNTYSTES--EWAYAAVSPNCFDNLVIGRELGHNLGCANNREH--STIEMEYAHGYRYC 1365
            I +MV+Y+  ++  MG  DA +++ ++AAI+  N  +DNS I +    VY G++ Y +  T    T L+ LQ       +++ ALRD+Y AD+V+LVD   D CG  YI+ ++Y++ +   +A+A V+ +C     +  E+GH  G  +N E   ST    Y++GYR C
Sbjct:  280 IDLMVVYSPQAVSKMGTEDA-LKSTITAAIAAANTAYDNSQINVALNPVYYGQVNYTEPAT--MPTALTQLQSKTDGIIDDIHALRDQYSADLVVLVDTNTDYCGYGYIMNSSYTSSAFAPYAFAVVNYSCLSLNSLAHEIGHLQGNQHNTESTTSTGAYSYSYGYRVC 445

[Close]

BLAST of mRNA_E-fasciculatus_F_contig1436.3172.1 vs. uniprot
Match: A0A651EZV2_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Phycisphaeraceae bacterium TaxID=2026777 RepID=A0A651EZV2_9BACT)

HSP 1 Score: 85.5 bits (210), Expect = 2.540e-14
Identity = 57/175 (32.57%), Postives = 96/175 (54.86%), Query Frame = 1

Query:  859 RKLQSDTVEIQVMVLYTNMSLDLMGVSDAQMETMVSAAISTVNVGFDNSIIGIDTATVYNGRLPYYQDYTEYSSTKLSALQEN-----EEVKALRDEYGADIVLLVDYLQDACGIAYILTNTYSTESEWAYAAVSPNC-FDNLVIGRELGHNLGCANNREHS-TIEMEYAHGYRY 1362
            R  Q D   I VM++YT  + +  G  +A ++++  +AIS+ N  + NS I      VY G + Y +  +   ST LS L+       +EV  +R++  AD+V L+    D CG+AY++TN  +  +  A++  +  C   NL    ELGHN+GCA++R ++ T    Y++G+R+
Sbjct:  199 RSQQDDGSVIDVMIVYTPAAQNAAGGQNA-IQSLAQSAISSTNNVYANSQIDTRLELVYLGLVNYQESGS--ISTDLSRLRGTSDGFMDEVHGIRNDVNADLVALLSVANDFCGVAYLMTNLSTGFASNAFSVTAYQCAVSNLTFAHELGHNMGCAHDRNNAGTALFPYSYGHRW 370

[Close]

BLAST of mRNA_E-fasciculatus_F_contig1436.3172.1 vs. uniprot
Match: A0A6H5JDN0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDN0_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 7.200e-13
Identity = 65/194 (33.51%), Postives = 93/194 (47.94%), Query Frame = 1

Query:  859 RKLQSDTVEIQVMVLYTNM------SLDLMGVSDAQMETMVSAAISTVNVGFDNSIIGIDTATVYNGRLPYYQDYTEYSSTKLSALQENEEVKALRDEYGADIVLLVDYLQDACGIAYILTN------------TYSTES----EWAYAAVSPNCFDNLVIGRELGHNLGCANNREH---STIEMEYAHGYRYC 1365
            R L S+TV I V+VLYT        S+D  G S AQME+ ++ A    N     S +      V+  + P+  D ++     + ALQ+NE V  LRDEYGAD+V L+ Y  + CG+   +++            T  T S    ++ Y+ V  NC  N     ELGHN G  +N+E+   S     Y + YR C
Sbjct:  187 RVLSSETV-IDVLVLYTEKAMLESNSVDGAGRSIAQMESDIATAYQGANNALSASGVNFSVRIVHMEQAPF--DESDSIVDDVRALQKNEGVHKLRDEYGADLVQLIGYYLNTCGVGSKVSSFFALYPARTHRFTMGTPSSGFAQYGYSVVHTNCLSNFSHIHELGHNFGANHNKENVGGSGGVDAYNYAYRNC 377

The following BLAST results are available for this feature:

BLAST of mRNA_E-fasciculatus_F_contig1436.3172.1 vs. uniprot

BLAST of mRNA_E-fasciculatus_F_contig1436.3172.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LCP8_ECTSI	8.050e-181	70.02	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JBZ9_9PHAE	2.510e-82	76.71	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JF50_9PHAE	3.700e-62	35.41	LNR domain-containing protein n=2 Tax=Ectocarpus s...	[more]
A0A6H5JG69_9PHAE	4.440e-50	42.47	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LC56_ECTSI	7.850e-25	25.50	Peptidyl-Asp metalloendopeptidase n=1 Tax=Ectocarp...	[more]
D7FTV1_ECTSI	1.090e-20	28.75	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D8LMP1_ECTSI	4.340e-19	35.80	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A839HE77_9GAMM	1.660e-17	34.91	Fibronectin type III domain-containing protein n=1...	[more]
A0A651EZV2_9BACT	2.540e-14	32.57	Uncharacterized protein (Fragment) n=1 Tax=Phycisp...	[more]
A0A6H5JDN0_9PHAE	7.200e-13	33.51	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-fasciculatus_F_contig1436	contig	E-fasciculatus_F_contig1436:12624..17585 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	117.1
Seed ortholog evalue	2.2e-23
Seed eggNOG ortholog	2880.D8LC56
EggNOG free text desc.	Metallo-peptidase family M12B Reprolysin-like
EggNOG OGs	2E79G@1,2SDWE@2759
COG Functional cat.	S
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
Hectar predicted targeting category	signal peptide
Exons	9
Model size	1380
Cds size	1380
Stop	1
Start	1

Relationships

The following CDS feature(s) are a part of this mRNA:

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_E-fasciculatus_F_contig1436.3172.1	prot_E-fasciculatus_F_contig1436.3172.1	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	polypeptide	E-fasciculatus_F_contig1436 12624..17585 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-fasciculatus_F_contig1436:12624..17585+
coding sequence from alignment at E-fasciculatus_F_contig1436:12624..17585+

protein sequence of mRNA_E-fasciculatus_F_contig1436.3172.1

>prot_E-fasciculatus_F_contig1436.3172.1 ID=prot_E-fasciculatus_F_contig1436.3172.1|Name=mRNA_E-fasciculatus_F_contig1436.3172.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=460bp
MSLPNTGHALLILLAALNSGFCQGSLHGVPFAGIGSVRPLRSASSSSFSQ
PNNTPAAVGDTALSNSSGVFTNLSALEEELVETLEVDEQVTVLGEVQLGE
LLCDSLVRAEDAPLLQFALSANETIIANQTSYTVVSGQTFTGGVGRRIWN
GVVVDPEPAAEEAFPRGVSMTWGEVCDVETFSLKVSKHTVEGNTSVVKSV
PCGLSGLEVCLVEVAYNFLPDKEPLRVGFNSTGQSTGVRRRLGDGNLGRG
GHGRRQQQQAFGWGWFAGGGGGGGGGGGGGGDSGLRRKLQSDTVEIQVMV
LYTNMSLDLMGVSDAQMETMVSAAISTVNVGFDNSIIGIDTATVYNGRLP
YYQDYTEYSSTKLSALQENEEVKALRDEYGADIVLLVDYLQDACGIAYIL
TNTYSTESEWAYAAVSPNCFDNLVIGRELGHNLGCANNREHSTIEMEYAH
GYRYCSGTT*

mRNA from alignment at E-fasciculatus_F_contig1436:12624..17585+

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-fasciculatus_F_contig1436.3172.1 ID=mRNA_E-fasciculatus_F_contig1436.3172.1|Name=mRNA_E-fasciculatus_F_contig1436.3172.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4962bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1436:12624..17585+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGAGTCTACCAAATACTGGGCACGCTCTGCTGATATTGCTTGCCGCGCT
GAACAGTGGATTCTGCCAAGGATCCCTCCATGGCGTTCCCTTCGCAGGAA
TCGGTTCTGTCCGACCGCTGCGCAGTGCGTCCTCCTCCTCTTTCTCACAA
CCAAACAACACACCAGCCGCGGTTGGAGACACTGCCCTGTCGAATTCGTC
CGGAGTTTTCACGAATTTGTCAGCCTTGGAGGAGGAACTTGTCGAAACGC
TCGAGGTTGACGAGCAAGTCACCGGTGAGATATGTATGTAGACTACCCAA
GTATTCTGGCAACAACGTGTGTGCCACTATGCATGCCAGGAAAGATGTTG
TAGGACCTGACCTACCGCCGAACATCGTTGGCGATGGTCGATGAAACGCT
GGATGTGTTGCTTCGAAGCTGTTAGAGTTCCAGTTTCCTTGACCTCAAGG
TGGCATCGTAGATGTTGCGAAGGATAACAATGCGAATCATCCTGAGAAAC
ACGTGTTACAGCCGCTCTTGATTGGGGGACACTAGGGTACGAGAGTAGAG
GCGCACGTGAACGGAAGTACGTACCATGTGGAGCGCCGTATAACAAGCAG
GGCCTAGCACCCCAACGTCGCTTCACCTGTCGCTGATGAAATTGCGAATC
GTTCAGTCCTTGGTGAGGTCCAGCTGGGCGAACTGCTGTGCGACAGCCTT
GTACGAGCTGAAGACGCACCGCTCCTCCAGTTCGCGTTGAGCGCCAACGA
GGTTGGTCCAATGGTGGTGTAGAGCTTGTCTCGAACCCAGGAAGCATGAT
CACAACTCTCACGTCTTTCATAACTCCAGCAATGTTCCGTACAATGGTTC
ACCTCGCACACTACTGTAGACTAGATAGCACACCCTCTCACCCAAGCCTT
CCTTCGATCGTCTCATTCTTTGGCAGACGATCATCGCAAACCAAACTTCC
TACACGGTCGTCAGTGGGCAGACTTTCACGGGCGGAGTAGGTCGAAGGGT
GAGTAGCGCAGGCCCGTTTAGCTGTAGTGCGCCCGTCCCATAATGTTGAT
TCACTTCGGCTAGCTTCTGTTAAGGATTGCAACACTATGGAGACCATTAA
ACACCACCAACAAGAACCAAAACAACGACAACTGTTGTGCGTTACCCCGT
TAAACAATCCACGGCGTGCGCGAAAACATTTTCTTGAAGATCTGGAACGG
GGTCGTCGTTGACCCCGAACCGGCCGCGGAGGAGGCCTTCCCACGGGGCG
TCAGCATGACTTGGGGCGAAGTTTGCGACGTTGAGGTGAGCATTTTCCTT
GCCATGTTTTTGTTTTAGAGACGTGTTAGCTTCGCCGTGAGAAGACAACG
AAGCTCGAACTCTACGAGACACGAAACTCGGAGTTGGTCTGAGCCGTCGT
TAGGTTTCGGGCTGCAGATTCGTCCAAGTTTCTTTAACTCTGAAAAAGAG
GCACGAGCTCAAGCACCTTTTTCGCCGTTCGTACAAGGACATATTTTGTC
TGTTTCTGGAGGGTGGTGTTCCGCGGTGTCATGGTAACGCTCTCAAGTAT
GAGGAGGGGAAGACCGTCACGATAGCTGTACTGGAGATCTCCATAAACGA
CATGCTCGAGATTTTGAGACCGGCGAGTCTCAGCAAGACCGCACGTGTAC
GCGTGCAGACCCTGGTGTCCAGCGGATGAGCCGCTGATTGGGACCGCAAA
CTCGTTGGAGCAAGTGTCCAAGACACAGGGGCAGCAGGAATCGGCCCTGC
AGCGGCACACGCTACCGGGATCGAAGACTCTACAAGAGACACAACAGCAC
CATCAAGCCCTCCACTCAACGCAAATCGGATACGGGTATGGGAGAACAAA
ATCACTTCACGGTACAACGCCGTTCCTGACGACGAGCGGGGCAGCACGAT
GCATACTCCACAAGCACCGAGACCCCACAAGGTCATAAAACTGATTGTCG
GGAGGCGTGTCTTGCACCGAATCGCAAGTACGAAGGCACACCTTCCCATA
CAAGGCAGGCCCTATGGCAACACTTGCAACCTCCCGGACGGAAGGAAGGC
TCCGACCCGGACATCTTCATCGTGCTAAAGATGGGGGCATTATCGTGCTC
CACCTCTCCAGGATCAGACTTGGGACGTCAGCAACGCGTTACGAGAACTA
CCACGTGCAACCAGCAAGTCTTCCATCGCGCATTGGAACTCGGGCCGAAA
CACATGCCCATGTACCTGAAAGGACACCTTGAACTACAGTATGTGTCTAC
AAGAGCGGGAGCTTCAAGATACGAAGCACGGGCTGACGCCAGTTTTGCTC
ACGAACTTGAGGAAGAGGCCCGCCTGTGGTTCAATATGTCTCTTGCCTGG
CGCACCTATCTGCTGGCGTTCTGCTCTGCAATCACTAACGGCACTCAGCC
AAAACTTGTCATACGATGCACGAGCTGAGTTTCGGACCACAGGCCATCAA
AATTGAGATCGATTCAACCTGCTCGTTGTCACTATGGATACAATGTGGGG
ATACCAATGCCTCTCCAACGATTAACGAAGGGATTAGTCGCTTAGTGGAG
GATGCTGTCCGCATGGATGAAGTACCCGCTGCGAAAGACGAGCGCCATGG
TGGTAACACGTTCGATTATTCCTTTTGGTCTCTTGCCCTGATCAGACCTT
CTCTCTAAAGGTATCGAAGCACACCGTCGAGGGAAACACGTCTGTGGTTA
AGTCCGTCCCGTGTGGATTGTCCGGCTTGGAGGTGTGTCTCGTCGAGGTG
AGCTCTTGCCCACATTGCTGCTTTCGATGCTGGTGTGAGACATCGTGGTG
TGTTGATACAATTAGCGACCCGCCTCTGGTGATCCTTAGCATTGGGCATT
CTCAGCCACGGCCAATCAACTTTCTATCAGGCACATCAACGATCGTTCAG
GCCGAAACAGATATATTTTCAAATTTTCGCGATTGACGCGGAAAGCAAGT
CTTTATTGACAGGCGTACCAAAATGTACCACACGTACGTGTGTTTCTTTT
CGGCGCCGAATTCTCTTGAAATGGCTGTAGGAAACAATGATCTTATCGTG
TACCGCACGTGCTTCCATCCTCCCGCGAAACTAGCGAACGTTTCAGAAAG
CAATGAGAAAAGTGTGCTTGCTTCTTCGTGCTTCTACGCTTAAGGTTGCG
TATAACTTTCTTCCTGACAAAGAGCCTCTCAGGGTCGGATTCAACAGCAC
CGGCCAATCCACGGGCGTGAGGCGACGGCTGGGCGACGGTAATCTTGGGA
GGGGCGGCCATGGCAGACGCCAACAGCAACAGGCATTTGGGTGGGGTTGG
TTTGCCGGCGGCGGTGGAGGCGGTGGCGGCGGCGGCGGCGGCGGCGGTGA
TAGTGGTTTACGTCGCAAGCTGCAGTCCGACACCGTGGAGGTGAGCATGT
GCATGCCGGGTATGGTCTGCTAACATGTGCTTAATTTATCGTGCACGTTG
CACCAAGGCACGATGGATCAAGACTCATTCCACGGAACGAAAAAACGAAA
ACAGCAGGGTACTTTAGTACATGACCCACCTCGACCAAACGAGGCCATGA
CGGTGTCCACATTTTCAGAACTTAAGACGTTCTCCCCAGATAGTTCATGC
GCAATGTTGACGAACTTCCCTGTGGCAAAGGAAAATCGTTTCACTATCGT
TGGGGTCGTCAGAAGACGGTGGGTCAACGTTTAGACGGGCATTTTCAGAG
AAAAGACAGAAACAACGAACAGGTACATGTGTTACAAAACCGACACCCCT
ACTGCTACCTGCGGAGGGCCGCCGGGGCTACGGGGATTCCAAAGCGGGGA
CAACGGTCCCCCTCACCCCATTGCCCCCCCCCTTGCTGCAACCAACCTCC
CGGGAAACGCCAAGTTTTTGCACAAAATAGCCGTCAGTTTTCGTCAGTTT
TCTCCAGTATCATACTCCAGTTCGCTTTCTCCTTCCGACGTTTGCCATAT
GACAACACAGATTCAGGTTATGGTGCTCTACACCAACATGTCGTTGGACT
TGATGGGCGTGAGCGACGCCCAGATGGAAACCATGGTCTCCGCTGCTATC
TCGACCGTGAACGTGGGCTTCGATAACTCCATCATCGGGATTGATACAGC
CACAGTCTACAATGGCAGGGTGAGTTGCGCGATGTCGGTCTCAAACAGGA
GAACATCACCACGTCCTCATGTGCTCACCTGCGACGACGAGATGCGTTTT
TGAGCCGCAAATGAGAATGTTGAAAGCTGGTTACTGAAAGTTGTGCTTGA
ATGGGTGGGAACAAGCGTGTAGGTTTCGGCTTTGCCTTTTCGAATCCATC
GTCTGATTCTGGCTCTCGTCTCGCTTGTTCGGTGAAGCTGCCGTACTACC
AGGACTACACGGAGTATTCCAGCACCAAACTCAGCGCCTTGCAGGAGAAC
GAGGAAGTTAAAGCCCTCCGGGATGAGTACGGGGCAGACATCGTTCTTCT
TGTCGACTACCTACAGGACGCCTGCGGAATCGCGTGAGAAAATGATCAAA
CCGCCCGGCTCGATGTCCTTCCGTCGCTGCTGATTGATACTGTTGCTTGT
TGTTGCTGTCGTACTCACTTCGAAGCTCAAACCAGTGCTTCAAAGGCCGG
TCCCAGTTGCAGAGTACAAGGCGATACGACTCTTCCGTGGCGCCAATAGT
GACTGATGCTCTCGTGAGAGACAAGGAAATTCCTGGCCAAGGCGCGTGGT
AACGGGTCAACGATAATACCAAAGGCTATCGTATGACAAGAGACAATCGA
GCTTTCCCCTGTCCGTTCCCAGGTACATTTTGACGAACACGTACTCAACG
GAGAGCGAGTGGGCTTATGCGGCGGTGTCACCAAATTGTTTCGACAACCT
GGTGATCGGTCGTGAGCTCGGCCACAACCTTGGCTGCGCGAATAACCGGG
AGCACAGCACCATCGAAATGGAGTACGCTCATGGCTACCGCTACTGCTCG
GGTACCACGTAA

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1436:12624..17585+

>mRNA_E-fasciculatus_F_contig1436.3172.1 ID=mRNA_E-fasciculatus_F_contig1436.3172.1|Name=mRNA_E-fasciculatus_F_contig1436.3172.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2760bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1436:12624..17585+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGAGTCTACCAAATACTGGGCACGCTCTGCTGATATTGCTTGCCGCGCT
GAACAGTGGATTCTGCCAAGGATCCCTCCATGGCGTTCCCTTCGCAGGAA
TCGGTTCTGTCCGACCGCTGCGCAGTGCGTCCTCCTCCTCTTTCTCACAA
CCAAACAACACACCAGCCGCGGTTGGAGACACTGCCCTGTCGAATTCGTC
CGGAGTTTTCACGAATTTGTCAGCCTTGGAGGAGGAACTTGTCGAAACGC
TCGAGGTTGACGAGCAAGTCACCGATGAGTCTACCAAATACTGGGCACGC
TCTGCTGATATTGCTTGCCGCGCTGAACAGTGGATTCTGCCAAGGATCCC
TCCATGGCGTTCCCTTCGCAGGAATCGGTTCTGTCCGACCGCTGCGCAGT
GCGTCCTCCTCCTCTTTCTCACAACCAAACAACACACCAGCCGCGGTTGG
AGACACTGCCCTGTCGAATTCGTCCGGAGTTTTCACGAATTTGTCAGCCT
TGGAGGAGGAACTTGTCGAAACGCTCGAGGTTGACGAGCAAGTCACCGTC
CTTGGTGAGGTCCAGCTGGGCGAACTGCTGTGCGACAGCCTTGTACGAGC
TGAAGACGCACCGCTCCTCCAGTTCGCGTTGAGCGCCAACGAGTCCTTGG
TGAGGTCCAGCTGGGCGAACTGCTGTGCGACAGCCTTGTACGAGCTGAAG
ACGCACCGCTCCTCCAGTTCGCGTTGAGCGCCAACGAGACGATCATCGCA
AACCAAACTTCCTACACGGTCGTCAGTGGGCAGACTTTCACGGGCGGAGT
AGGTCGAAGGACGATCATCGCAAACCAAACTTCCTACACGGTCGTCAGTG
GGCAGACTTTCACGGGCGGAGTAGGTCGAAGGATCTGGAACGGGGTCGTC
GTTGACCCCGAACCGGCCGCGGAGGAGGCCTTCCCACGGGGCGTCAGCAT
GACTTGGGGCGAAGTTTGCGACGTTGAGATCTGGAACGGGGTCGTCGTTG
ACCCCGAACCGGCCGCGGAGGAGGCCTTCCCACGGGGCGTCAGCATGACT
TGGGGCGAAGTTTGCGACGTTGAGACCTTCTCTCTAAAGGTATCGAAGCA
CACCGTCGAGGGAAACACGTCTGTGGTTAAGTCCGTCCCGTGTGGATTGT
CCGGCTTGGAGGTGTGTCTCGTCGAGACCTTCTCTCTAAAGGTATCGAAG
CACACCGTCGAGGGAAACACGTCTGTGGTTAAGTCCGTCCCGTGTGGATT
GTCCGGCTTGGAGGTGTGTCTCGTCGAGGTTGCGTATAACTTTCTTCCTG
ACAAAGAGCCTCTCAGGGTCGGATTCAACAGCACCGGCCAATCCACGGGC
GTGAGGCGACGGCTGGGCGACGGTAATCTTGGGAGGGGCGGCCATGGCAG
ACGCCAACAGCAACAGGCATTTGGGTGGGGTTGGTTTGCCGGCGGCGGTG
GAGGCGGTGGCGGCGGCGGCGGCGGCGGCGGTGATAGTGGTTTACGTCGC
AAGCTGCAGTCCGACACCGTGGAGGTTGCGTATAACTTTCTTCCTGACAA
AGAGCCTCTCAGGGTCGGATTCAACAGCACCGGCCAATCCACGGGCGTGA
GGCGACGGCTGGGCGACGGTAATCTTGGGAGGGGCGGCCATGGCAGACGC
CAACAGCAACAGGCATTTGGGTGGGGTTGGTTTGCCGGCGGCGGTGGAGG
CGGTGGCGGCGGCGGCGGCGGCGGCGGTGATAGTGGTTTACGTCGCAAGC
TGCAGTCCGACACCGTGGAGATTCAGGTTATGGTGCTCTACACCAACATG
TCGTTGGACTTGATGGGCGTGAGCGACGCCCAGATGGAAACCATGGTCTC
CGCTGCTATCTCGACCGTGAACGTGGGCTTCGATAACTCCATCATCGGGA
TTGATACAGCCACAGTCTACAATGGCAGGATTCAGGTTATGGTGCTCTAC
ACCAACATGTCGTTGGACTTGATGGGCGTGAGCGACGCCCAGATGGAAAC
CATGGTCTCCGCTGCTATCTCGACCGTGAACGTGGGCTTCGATAACTCCA
TCATCGGGATTGATACAGCCACAGTCTACAATGGCAGGCTGCCGTACTAC
CAGGACTACACGGAGTATTCCAGCACCAAACTCAGCGCCTTGCAGGAGAA
CGAGGAAGTTAAAGCCCTCCGGGATGAGTACGGGGCAGACATCGTTCTTC
TTGTCGACTACCTACAGGACGCCTGCGGAATCGCCTGCCGTACTACCAGG
ACTACACGGAGTATTCCAGCACCAAACTCAGCGCCTTGCAGGAGAACGAG
GAAGTTAAAGCCCTCCGGGATGAGTACGGGGCAGACATCGTTCTTCTTGT
CGACTACCTACAGGACGCCTGCGGAATCGCGTACATTTTGACGAACACGT
ACTCAACGGAGAGCGAGTGGGCTTATGCGGCGGTGTCACCAAATTGTTTC
GACAACCTGGTGATCGGTCGTGAGCTCGGCCACAACCTTGGCTGCGCGAA
TAACCGGGAGCACAGCACCATCGAAATGGAGTACGCTCATGGCTACCGCT
ACTGCTCGGGTACCACGTAAGTACATTTTGACGAACACGTACTCAACGGA
GAGCGAGTGGGCTTATGCGGCGGTGTCACCAAATTGTTTCGACAACCTGG
TGATCGGTCGTGAGCTCGGCCACAACCTTGGCTGCGCGAATAACCGGGAG
CACAGCACCATCGAAATGGAGTACGCTCATGGCTACCGCTACTGCTCGGG
TACCACGTAA