prot_E-fasciculatus_F_contig14347.3167.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14347.3167.1
Unique Nameprot_E-fasciculatus_F_contig14347.3167.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length181
Homology
BLAST of mRNA_E-fasciculatus_F_contig14347.3167.1 vs. uniprot
Match: A0A6H5K4J4_9PHAE (Tr-type G domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4J4_9PHAE)

HSP 1 Score: 242 bits (618), Expect = 4.480e-75
Identity = 163/184 (88.59%), Postives = 165/184 (89.67%), Query Frame = 0
Query:    1 MAESWEDIDKQTKKSGGGLNPSAASFSFNPAVASWSPGGAAXXXXXXXXXXPSPMQSAQAMAADKVGAVAEGMREVSISSAAPAXXXXXXXXXXXXXXXXXXXSKDQSEA---GGDAEEVDENDPLWKATLQVANGDRAKALKMLEDPDALMANPEINKIIAEGAASGDAALEDVEGQYPEQAG 181
            MAESWEDIDKQTKKSGGGLNP+AASFSFNPAVASWSPGGAA   XXXXXXX   MQSAQAMAADKVGAVAEGMREVSISS   A XXXXXXXXXXXXXXX   SKDQSE    GGDAEE+DENDPLWKATLQVANGDRAKALKMLEDPDALMANPEINKIIAEGA SGDAALE VEGQYPEQAG
Sbjct:    1 MAESWEDIDKQTKKSGGGLNPAAASFSFNPAVASWSPGGAAPTPXXXXXXXXXXMQSAQAMAADKVGAVAEGMREVSISS---APXXXXXXXXXXXXXXXAEDSKDQSEGAGDGGDAEEMDENDPLWKATLQVANGDRAKALKMLEDPDALMANPEINKIIAEGAVSGDAALEVVEGQYPEQAG 181          
BLAST of mRNA_E-fasciculatus_F_contig14347.3167.1 vs. uniprot
Match: D7G008_ECTSI (Sup35, eukaryotic translation termination factor eRF3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G008_ECTSI)

HSP 1 Score: 241 bits (615), Expect = 4.650e-73
Identity = 165/184 (89.67%), Postives = 168/184 (91.30%), Query Frame = 0
Query:    1 MAESWEDIDKQTKKSGGGLNPSAASFSFNPAVASWSPGGAAXXXXXXXXXXPSPMQSAQAMAADKVGAVAEGMREVSISSAAPAXXXXXXXXXXXXXXXXXXXSKDQSEA---GGDAEEVDENDPLWKATLQVANGDRAKALKMLEDPDALMANPEINKIIAEGAASGDAALEDVEGQYPEQAG 181
            MAESWEDIDKQTKKSGGGLNP+AASFSFNPAVASWSPGGAA XXXXXXXXX    QSAQAMAADKVGAVAEGMREVSISS   A XXXXXXXXXXXXXXXX  SKDQSE    GGDAEE+DENDPLWKATLQVANGDRAKALKMLEDPDALMANPE+NKIIAEGAASGDAALE VEGQYPEQAG
Sbjct:    1 MAESWEDIDKQTKKSGGGLNPAAASFSFNPAVASWSPGGAAPXXXXXXXXXXXXXQSAQAMAADKVGAVAEGMREVSISS---APXXXXXXXXXXXXXXXXEESKDQSEGVGDGGDAEEMDENDPLWKATLQVANGDRAKALKMLEDPDALMANPEVNKIIAEGAASGDAALEVVEGQYPEQAG 181          
BLAST of mRNA_E-fasciculatus_F_contig14347.3167.1 vs. uniprot
Match: A0A835YYC4_9STRA (Sup35, eukaryotic translation termination factor eRF3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYC4_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 2.980e-16
Identity = 65/155 (41.94%), Postives = 89/155 (57.42%), Query Frame = 0
Query:   17 GGLNPSAASFSFNPAVASWSPGGAAXXXXXXXXXXPSPMQSAQAMAADKVGAVAEGMREVSISSAAPAXXXXXXXXXXXXXXXXXXXSKDQSEAGGDAEEVDENDPLWKATLQVANGDRAKALKMLEDPDALMANPEINKIIAEGAASGDAALED 171
            G LNP+A SF+FNP  ++W+P    XXXXXXX   P+ +++AQA A DKV    + +    I+S A                          E   D E +DE DPLW+ TL++A GDRA+A +MLE+PDALMA+PEI  +I   AA+ DAA ++
Sbjct:    8 GALNPNAKSFTFNPNASTWAPXX--XXXXXXXQSQPAAIRTAQAAATDKV---TDQLAAAKIASQA-------------------------GEGSDDEEPIDETDPLWQVTLRIAGGDRARAKRMLENPDALMAHPEIVAVIDATAAADDAAADE 132          
BLAST of mRNA_E-fasciculatus_F_contig14347.3167.1 vs. uniprot
Match: A0A812YS44_SYMMI (SUP35 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812YS44_SYMMI)

HSP 1 Score: 71.6 bits (174), Expect = 5.630e-12
Identity = 33/50 (66.00%), Postives = 41/50 (82.00%), Query Frame = 0
Query:  115 EEVDENDPLWKATLQVANGDRAKALKMLEDPDALMANPEINKIIAEGAAS 164
            EE+DENDPLWKATLQ+A GDR  ALK+LEDPDALM  PE+ K++ E  ++
Sbjct:   54 EEIDENDPLWKATLQIAKGDRKVALKLLEDPDALMQYPEVAKMMEEAEST 103          
BLAST of mRNA_E-fasciculatus_F_contig14347.3167.1 vs. uniprot
Match: A0A6V1P3V7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P3V7_HETAK)

HSP 1 Score: 72.0 bits (175), Expect = 1.920e-11
Identity = 32/47 (68.09%), Postives = 39/47 (82.98%), Query Frame = 0
Query:  115 EEVDENDPLWKATLQVANGDRAKALKMLEDPDALMANPEINKIIAEG 161
            EE+DENDPLWK TLQ+A GDRA ALK+LEDPDALM+ PE+  ++  G
Sbjct:  122 EEIDENDPLWKVTLQLAGGDRAAALKLLEDPDALMSRPEVVAVLGSG 168          
BLAST of mRNA_E-fasciculatus_F_contig14347.3167.1 vs. uniprot
Match: A0A7S1YMF6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YMF6_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 2.990e-8
Identity = 32/61 (52.46%), Postives = 43/61 (70.49%), Query Frame = 0
Query:  107 QSEAGGDAEEVDENDPLWKATLQVANGDRAKALKMLEDPDALMANPEINKIIAEGAASGDA 167
            +SE+G D   VDENDPLWK   ++A GDRAKALK++ DPD+L   PE+ + +A  +  GDA
Sbjct:    2 RSESGDD---VDENDPLWKIVFKIAEGDRAKALKLIGDPDSLTNYPEVVEFLA-SSEGGDA 58          
BLAST of mRNA_E-fasciculatus_F_contig14347.3167.1 vs. uniprot
Match: A0A1Z5KGS5_FISSO (Peptide chain release factor subunit 3 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KGS5_FISSO)

HSP 1 Score: 62.0 bits (149), Expect = 5.260e-8
Identity = 30/54 (55.56%), Postives = 41/54 (75.93%), Query Frame = 0
Query:  115 EEVDENDPLWKATLQVANGDRAKALKMLEDPDALMANPEINKIIAEGAASGDAA 168
            +E+DE DPLW+A L++++GDR KALK++ +PD L A PEI KI+ E    GDAA
Sbjct:   41 DEIDEQDPLWQAVLKISDGDREKALKLINNPDELAAYPEIQKILEE--TGGDAA 92          
BLAST of mRNA_E-fasciculatus_F_contig14347.3167.1 vs. uniprot
Match: A0A7S2DPN8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DPN8_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 7.240e-8
Identity = 25/45 (55.56%), Postives = 37/45 (82.22%), Query Frame = 0
Query:  110 AGGDAEEVDENDPLWKATLQVANGDRAKALKMLEDPDALMANPEI 154
            A  + +++DENDPLWK TL++A GDR +A+KML DPD+LM +P++
Sbjct:   49 AAEEEDDIDENDPLWKVTLEIAGGDRDRAIKMLGDPDSLMKHPQV 93          
BLAST of mRNA_E-fasciculatus_F_contig14347.3167.1 vs. uniprot
Match: A0A7R9WBC9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WBC9_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 3.190e-7
Identity = 24/50 (48.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:  116 EVDENDPLWKATLQVANGDRAKALKMLEDPDALMANPEINKIIAEGAASG 165
            ++DENDPLWK  L++A GDR +A++M+ DPD L   PE++ ++ + AA G
Sbjct:   45 DIDENDPLWKVVLKIAEGDRDRAMRMIADPDCLAQYPEVDAVLEQMAAEG 94          
BLAST of mRNA_E-fasciculatus_F_contig14347.3167.1 vs. uniprot
Match: A0A7S2KHT6_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KHT6_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 5.770e-5
Identity = 24/49 (48.98%), Postives = 35/49 (71.43%), Query Frame = 0
Query:  116 EVDENDPLWKATL-QVANGDRAKALKMLEDPDALMANPEINKIIAEGAA 163
            ++DE+DPLW+  L ++ NGDR +ALK++ DPD L   PE+  I+A G A
Sbjct:   41 DIDESDPLWQVVLTKICNGDRDRALKLINDPDQLTQYPEVEAILAAGDA 89          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14347.3167.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A6H5K4J4_9PHAE4.480e-7588.59Tr-type G domain-containing protein n=1 Tax=Ectoca... [more]
D7G008_ECTSI4.650e-7389.67Sup35, eukaryotic translation termination factor e... [more]
A0A835YYC4_9STRA2.980e-1641.94Sup35, eukaryotic translation termination factor e... [more]
A0A812YS44_SYMMI5.630e-1266.00SUP35 protein (Fragment) n=1 Tax=Symbiodinium micr... [more]
A0A6V1P3V7_HETAK1.920e-1168.09Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1YMF6_9STRA2.990e-852.46Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
A0A1Z5KGS5_FISSO5.260e-855.56Peptide chain release factor subunit 3 n=2 Tax=Fis... [more]
A0A7S2DPN8_9STRA7.240e-855.56Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7R9WBC9_9STRA3.190e-748.00Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A7S2KHT6_9STRA5.770e-548.98Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14347contigE-fasciculatus_F_contig14347:849..3354 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14347.3167.1mRNA_E-fasciculatus_F_contig14347.3167.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14347 834..3354 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14347.3167.1 ID=prot_E-fasciculatus_F_contig14347.3167.1|Name=mRNA_E-fasciculatus_F_contig14347.3167.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=181bp
MAESWEDIDKQTKKSGGGLNPSAASFSFNPAVASWSPGGAAAAPAAAAAA
APSPMQSAQAMAADKVGAVAEGMREVSISSAAPAATGAAAAAAAASGGGG
AEESKDQSEAGGDAEEVDENDPLWKATLQVANGDRAKALKMLEDPDALMA
NPEINKIIAEGAASGDAALEDVEGQYPEQAG
back to top