mRNA_E-fasciculatus_F_contig14346.3166.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig14346.3166.1
Unique NamemRNA_E-fasciculatus_F_contig14346.3166.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig14346.3166.1 vs. uniprot
Match: D8LBY3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBY3_ECTSI)

HSP 1 Score: 709 bits (1831), Expect = 1.400e-248
Identity = 373/438 (85.16%), Postives = 404/438 (92.24%), Query Frame = 1
Query:    1 MSLFCLSGIGWFRRFLVATQLSLLAEALITVTEADYSPVLALVRVVEPLFESAPQLLLQLHALLWGWTETTSSSSRLAWRVVSVCISAASLSYAATDVSSVERLSTCDGGKDGERFRICPCFPSLTGVVFSRVPAEGTSSLRGLGNVHPRSHVWLCFVYHVLEIVARFVPLAMLVLVVGGWFFFVLMYLWVSRALIVWMTAREGLDFRFRVRLVAMPFLDSIMDETAAFGIALVLTLVEFIVCMVIYHVYKHDDLPSRARLVLVTVASCCMVGKMCLAWVAISPLKMDGDHSESQGDGVVGDGRGSAVTDESVANVEMSAIEDGKVEGGVEASVASEPASPKGADGPSATSAVSMGSVVRSPGDVKVEDDSEGAEAGEFVGGSDLTRLEDGKIEDSAKAGGGSEVSPPEGTRLSPATHVLPMVSTVGGPDDGKVEDDL 1314
            MSLFCLSGIGWFRRFLVA QLSLLAEALIT+T+ADYSPVLALVRV+EPLFES PQLLLQLHA+LW WTET+ +SSRLAWRVVSVCISAASL+YAATDVSSVERLSTCDGGKDGERFR+CPCFPSLTG+VFSRVPA+GTSSLRGLGNVHPRSHVWLC VYHVLEIVARFVPLAML+LVV GWFFFVL+YLWVSRAL+VWM ARE L FRF VRLVAMPFLDSIMDET AFGI L LTLVEFIVCMV+YHVYKHDDLPSRARLVLVTVASCCMVGKMCLA VAISPLK+DG++SESQGDGV+GDGRGSAVTD SVA+VEMSAIED KV+GGVEASV SEPASPKGADGPS TSA+S GSV+R PGDVK+ED+++GA+A E   GS+L R+EDGKIED +KA GGSEVSPPEGT L PATH L  +STVGG DD KVEDDL
Sbjct:  457 MSLFCLSGIGWFRRFLVAAQLSLLAEALITLTKADYSPVLALVRVIEPLFESVPQLLLQLHAMLWLWTETSFTSSRLAWRVVSVCISAASLAYAATDVSSVERLSTCDGGKDGERFRLCPCFPSLTGLVFSRVPAQGTSSLRGLGNVHPRSHVWLCLVYHVLEIVARFVPLAMLLLVVRGWFFFVLVYLWVSRALMVWMAAREVLGFRFWVRLVAMPFLDSIMDETTAFGIGLGLTLVEFIVCMVVYHVYKHDDLPSRARLVLVTVASCCMVGKMCLALVAISPLKVDGNYSESQGDGVLGDGRGSAVTDGSVADVEMSAIEDSKVDGGVEASVVSEPASPKGADGPSVTSALSTGSVIRGPGDVKLEDETDGADADELEQGSELMRMEDGKIEDGSKAAGGSEVSPPEGTHLPPATHPLSTMSTVGGSDDAKVEDDL 894          
BLAST of mRNA_E-fasciculatus_F_contig14346.3166.1 vs. uniprot
Match: A0A6H5JJ93_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ93_9PHAE)

HSP 1 Score: 640 bits (1650), Expect = 9.370e-227
Identity = 340/405 (83.95%), Postives = 366/405 (90.37%), Query Frame = 1
Query:    1 MSLFCLSGIGWFRRFLVATQLSLLAEALITVTEADYSPVLALVRVVEPLFESAPQLLLQLHALLWGWTETTSSSSRLAWRVVSVCISAASLSYAATDVSSVERLSTCDGGKDGERFRICPCFPSLTGVVFSRVPAEGTSSLRGLGNVHPRSHVWLCFVYHVLEIVARFVPLAMLVLVVGGWFFFVLMYLWVSRALIVWMTAREGLDFRFRVRLVAMPFLDSIMDETAAFGIALVLTLVEFIVCMVIYHVYKHDDLPSRARLVLVTVASCCMVGKMCLAWVAISPLKMDGDHSESQGDGVVGDGRGSAVTDESVANVEMSAIEDGKVEGGVEASVASEPASPKGADGPSATSAVSMGSVVRSPGDVKVEDDSEGAEAGEFVGGSDLTRLEDGKIEDSAKAGGGSEV 1215
            MS FCLSG+GWFRRFLVATQLSLLAEALIT+ +ADYSPVLALVRV+ PLFES PQLLLQLHA+LW WTET+ +SSRLAWRVVSVCISAASL+YAATDVSSVERLSTCDGG DGERFR+CPCFPSLTGVVFSRVPAEGTSSLRG+G+VHPRSHVWLC VYHVLEI ARFVPLAMLV VV GWFFFVL+YLWV R LIVWMTARE L FRF VRLVAMPFLDSIMDET AFGI LVLTLVEFIVCMVIYHVY +DDLPSRARLVLVTVASCCMVGKMCLAWVAISPLK+DG +SESQGD V+GDGRGSAVTD SVA+VEMSA+ED KV  G EASV SE ASP G DGPSATSAVS GS +RSPGDV+VED+++G EA EF  GSDLTR+EDG +ED +KA GGSEV
Sbjct:  110 MSAFCLSGVGWFRRFLVATQLSLLAEALITLQKADYSPVLALVRVIGPLFESVPQLLLQLHAMLWLWTETSFASSRLAWRVVSVCISAASLAYAATDVSSVERLSTCDGGMDGERFRLCPCFPSLTGVVFSRVPAEGTSSLRGVGDVHPRSHVWLCLVYHVLEIFARFVPLAMLVQVVRGWFFFVLVYLWVGRGLIVWMTAREVLGFRFWVRLVAMPFLDSIMDETTAFGIGLVLTLVEFIVCMVIYHVYMNDDLPSRARLVLVTVASCCMVGKMCLAWVAISPLKVDGHYSESQGDSVLGDGRGSAVTDGSVADVEMSAVEDSKVGDGAEASVTSEAASPHGEDGPSATSAVSTGSEIRSPGDVQVEDETDGVEADEFEQGSDLTRMEDGVVEDGSKAAGGSEV 514          
BLAST of mRNA_E-fasciculatus_F_contig14346.3166.1 vs. uniprot
Match: A0A6H5JL60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL60_9PHAE)

HSP 1 Score: 576 bits (1485), Expect = 4.640e-203
Identity = 323/405 (79.75%), Postives = 350/405 (86.42%), Query Frame = 1
Query:    1 MSLFCLSGIGWFRRFLVATQLSLLAEALITVTEADYSPVLALVRVVEPLFESAPQLLLQLHALLWGWTETTSSSSRLAWRVVSVCISAASLSYAATDVSSVERLSTCDGGKDGERFRICPCFPSLTGVVFSRVPAEGTSSLRGLGNVHPRSHVWLCFVYHVLEIVARFVPLAMLVLVVGGWFFFVLMYLWVSRALIVWMTAREGLDFRFRVRLVAMPFLDSIMDETAAFGIALVLTLVEFIVCMVIYHVYKHDDLPSRARLVLVTVASCCMVGKMCLAWVAISPLKMDGDHSESQGDGVVGDGRGSAVTDESVANVEMSAIEDGKVEGGVEASVASEPASPKGADGPSATSAVSMGSVVRSPGDVKVEDDSEGAEAGEFVGGSDLTRLEDGKIEDSAKAGGGSEV 1215
            ++LF LSG+G FRRFLVATQLSLLAEA  TV    YSPVLALVRVVEPLFES PQLLLQL+A+L  W ET+SSSSRLAWR VSVCIS ASL+YAATDVSSVERL TC GG D ERFR+ PC  SLTG+VFSRVPA+GTSSL+G+GNVHPRSHVWLCFVYHVLEIVARFVPLAMLVLVV GWF  VL+YLWVSR L+V +T REGLDFRF VRLVAMPFLDSIMDET AFG  LVLTLVEFI+C+VIYHVYKHDDLPS ARLVLVTVASCCMVGKMCLAWV ISPLK+DG++S SQGDGV+GDGRGSAVTD SVA+V        KVEGGVEASV SE ASPKGADGPSATS V+ GSV RSPGDVK+ED+++G EAGEFV  SDLTR EDG IED AKA GGSEV
Sbjct:   23 VALFVLSGVGPFRRFLVATQLSLLAEAWNTVGGQVYSPVLALVRVVEPLFESVPQLLLQLYAMLRLWPETSSSSSRLAWREVSVCISVASLAYAATDVSSVERLLTCGGGSDCERFRLGPCCSSLTGLVFSRVPAQGTSSLKGVGNVHPRSHVWLCFVYHVLEIVARFVPLAMLVLVVRGWFLLVLVYLWVSRVLMVRVT-REGLDFRFGVRLVAMPFLDSIMDETTAFGTGLVLTLVEFILCVVIYHVYKHDDLPSGARLVLVTVASCCMVGKMCLAWVTISPLKVDGNYSGSQGDGVLGDGRGSAVTDGSVADVXXXXXXXXKVEGGVEASVTSEAASPKGADGPSATSVVA-GSVARSPGDVKLEDETDGVEAGEFVHESDLTRTEDGNIEDGAKAAGGSEV 425          
BLAST of mRNA_E-fasciculatus_F_contig14346.3166.1 vs. uniprot
Match: D8LFI4_ECTSI (Leucine Rich Repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFI4_ECTSI)

HSP 1 Score: 327 bits (837), Expect = 4.350e-99
Identity = 182/290 (62.76%), Postives = 219/290 (75.52%), Query Frame = 1
Query:   37 RRFLVATQLSLLAEALITVTEADYSPVLALVRVVEPLFESAPQLLLQLHALLWGWTETTSSSSRLAWRVVSVCISAASLSYAATDVSSVERL-STCDGGKDG-ERFRICPCFPSLTGVVFSRVPAEGTSSLRG-LGNVHPRSHVWLCFVYHVLEIVARFVPLAMLVLVVGGWFFFVLMYLWVSRALIVWMTAREG---LDFRFRVRLVAMPFLDSIMDETAAFGIALVLTLVEFIVCMVIYHVYKHDDLPSRARLVLVTVASCCMVGKMCLAWVAISPLKMDGDHSESQG 888
            RRFLVATQLSLL EA+ +     YSPVLALVRV+EPLFES PQLLLQL+A+L  W+ET+ S+S L  RV+SVCIS  SL+YAATDVSSVERL +T   G+ G ERFR+CP  PS+T +VFSRVP +G S L G +G VHPR+HVW CF+YHVLEIV+RFVPL M+ LV+  WFF VL YLW+SR L+VW  A  G   + FRFRVR+VAMPF+DSI+D T AFG  LVLTLVEF+ C+V YH++  D LP  AR  L  ++ CCMVGKM LA +AI PLK +    +SQG
Sbjct:  253 RRFLVATQLSLLLEAVFSAASRTYSPVLALVRVIEPLFESVPQLLLQLYAMLLLWSETSLSNSDLNGRVISVCISTVSLAYAATDVSSVERLLNTRLSGEGGTERFRMCPDCPSVTALVFSRVPEKGVSRLAGRMGWVHPRTHVWFCFLYHVLEIVSRFVPLTMIALVLRKWFFLVLPYLWISRCLVVWAAAYSGEATMGFRFRVRIVAMPFIDSILDGTRAFGAGLVLTLVEFVACIVTYHLFSSDHLPPHARWTLTIISICCMVGKMRLALLAIIPLKANERGLQSQG 542          
BLAST of mRNA_E-fasciculatus_F_contig14346.3166.1 vs. uniprot
Match: A0A6H5K7Q2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Q2_9PHAE)

HSP 1 Score: 320 bits (820), Expect = 2.310e-97
Identity = 180/290 (62.07%), Postives = 217/290 (74.83%), Query Frame = 1
Query:   37 RRFLVATQLSLLAEALITVTEADYSPVLALVRVVEPLFESAPQLLLQLHALLWGWTETTSSSSRLAWRVVSVCISAASLSYAATDVSSVERL-STCDGGKDG-ERFRICPCFPSLTGVVFSRVPAEGTSSLRG-LGNVHPRSHVWLCFVYHVLEIVARFVPLAMLVLVVGGWFFFVLMYLWVSRALIVWMTAREG---LDFRFRVRLVAMPFLDSIMDETAAFGIALVLTLVEFIVCMVIYHVYKHDDLPSRARLVLVTVASCCMVGKMCLAWVAISPLKMDGDHSESQG 888
            RRFLVATQLSLL EA+ +     YSPVLALVRV+EPLFES PQLLLQL+A+L  W+ET+ S+S L  RV+SVCIS  SL+YAATDVSSVERL +T   G+ G ER R+CP  P +TG+VFSRVP +G S L G +G VHPR+HVW CF+YHVLEIV+RFVPL M+ LV+  WFF VL YLW+SR L+VW  A  G   + FRFRVR+VAMPF+DSI+D T AFG  LVLTLV+F+ C+V YH++    LP  AR  L  +A CCMVGKM LA +AI PLK +    +SQG
Sbjct:  158 RRFLVATQLSLLLEAVFSAASRTYSPVLALVRVIEPLFESVPQLLLQLYAMLLLWSETSLSNSDLNGRVISVCISTVSLAYAATDVSSVERLLNTRLSGEGGTERSRMCPDCPFITGLVFSRVPEKGVSRLAGRMGWVHPRTHVWFCFLYHVLEIVSRFVPLTMIALVLRKWFFLVLPYLWISRCLVVWAAAYWGEATMGFRFRVRIVAMPFIDSILDGTRAFGAGLVLTLVKFVACIVTYHLFSSGHLPPHARWTLTIIAICCMVGKMRLALLAILPLKANEHGFQSQG 447          
BLAST of mRNA_E-fasciculatus_F_contig14346.3166.1 vs. uniprot
Match: A0A6H5KD04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD04_9PHAE)

HSP 1 Score: 286 bits (731), Expect = 1.560e-87
Identity = 166/297 (55.89%), Postives = 203/297 (68.35%), Query Frame = 1
Query:   25 IGWFRRFLVATQLSLLAEALITVTEADYSPVLALVRVVEPLFESAPQLLLQLHALLWGWTETTSSSSRLAWRVVSVCISAASLSYAATDVSSVERLSTCDGGKDGERFRICPCFPSLTGVVFSRVPAEGTSSLRGLGNVHPRSHVWLCFVYHVLEIVARFVPLAMLVLVVGGWFFFVLMYLWVSRALI-----VWMTA----------REGLDFRFRVRLVAMPFLDSIMDETAAFGIALVLTLVEFIVCMVIYHVYKHDDLPSRARLVLVTVASCCMVGKMCLAWVAISPLKMDGD 870
            + W RR LVATQLSLL EA   V +  ++P+L +VR++E LFES PQLLLQL+A L  W    SS  R   R+ SVCISA SL+Y ATD+ S +RL  C    +G    ICPC   LTG+ FSRVP +G+S L G G+VHPR+HVWLC +YH+LEIV+RFVPLAML LV+  WFF VL YLW SR  +      W             R+ +  R RV+LVAMPFLDS+MD +AAFG+ LV+TLVEFIVC+VIYH+Y HDDLP+  RL L  VAS CMVGK+ LA +AI PL+ D D
Sbjct:  124 VPWVRRVLVATQLSLLVEAWRNVAKRRFTPILEVVRLIEALFESVPQLLLQLYAALLLW----SSPERNVLRLGSVCISAGSLAYNATDLFSAKRLERCSDPLEGG---ICPCCSWLTGLPFSRVPEKGSSRLNGWGDVHPRTHVWLCLLYHILEIVSRFVPLAMLALVMRKWFFLVLPYLWWSRYAVRKKAAAWTRKSTRETDKARPRKSVTERVRVKLVAMPFLDSVMDGSAAFGLGLVVTLVEFIVCVVIYHLYNHDDLPTNLRLGLYVVASSCMVGKLLLAALAIFPLRADED 413          
BLAST of mRNA_E-fasciculatus_F_contig14346.3166.1 vs. uniprot
Match: A0A6H5JCI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCI0_9PHAE)

HSP 1 Score: 202 bits (513), Expect = 5.580e-57
Identity = 136/313 (43.45%), Postives = 183/313 (58.47%), Query Frame = 1
Query:    4 SLFCLSGIGWFRRFLVATQLSLLAEALITVTEADYSPVLALVRVVEPLFESAPQLLLQLHALLWGWTETTSSSSRLAWRVVSVCISAASLSYAATDVSSVERLSTCDGGKDGERFRICP-------CFP-----SLTGVVFSRVPAEGTSSLRGLGNVHPRSHVWLCFVYHVLEIVARFVPLAMLVLVVGGWFFFVLMYLWVSRALIV----WMT---------AREGLD-FRFRVRLVAMPFLDSIMDETAAFGIALVLTLVEFIVCMVIYHVYKHDDLPSRARLVLVTVASCCMVGKMCLAWVAISPLKMD 864
            +LF LSG+G+ RR LV  QLS+L EA  T T   YS  L  VRVVEPLFE+A  LLLQLHA+L  W E   S +       SV IS  S SYA TD SSVE L        G+    C        C+P     S T + FSR P +G  +L  LG +HP++ VW+CF+YH++E+V+RF+PLA L+L+   WF  VL+Y W+S+A +V    W T         AR+     RF+VR+VAMPFLDSI+ +  AF + L LT +EF+V   +YHVY  D++ S  +LV   +A+ C++    LA + +  LK +
Sbjct:   56 ALFFLSGVGFVRRLLVVLQLSVLVEAFSTATGEVYSRKLGFVRVVEPLFEAALHLLLQLHAILVPWNEEPPSPNTFLAPFRSVFISVGSQSYAVTDNSSVEGLKAA-ATPVGDVSNWCSRCSRPSCCWPTWCPWSGTRLPFSRAPTKGELNLGCLGKMHPQTQVWVCFLYHIVEVVSRFIPLAFLILLTRPWFIGVLVYFWLSQAALVGWMAWQTDDRRSRLNAARDEFSSLRFKVRVVAMPFLDSIISQEEAFVVGLWLTDLEFVVYTTLYHVYPSDEVASHDQLVFTIIAAICLL----LARLVMMSLKKE 363          
BLAST of mRNA_E-fasciculatus_F_contig14346.3166.1 vs. uniprot
Match: A0A6H5K6W6_9PHAE (HTH psq-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6W6_9PHAE)

HSP 1 Score: 191 bits (485), Expect = 1.690e-51
Identity = 137/313 (43.77%), Postives = 165/313 (52.72%), Query Frame = 1
Query:    4 SLFCLSGIGWFRRFLVATQLSLLAEALITVTEADYSPVLALVRVVEPLFESAPQLLLQLHALLWGWTETTSSSSRLAWR-------------------------VVSVCISAASLSYAATDVSSVERLSTCDGGKDGERFRICPCFPSLTGVVFSRVPAEGTSSLRGLGNVHPRSHVWLCFVYHVLEIVARFVPLAMLVLVVGGWFFFVLMYLWVSRALIVWMTA-REGLDFRFRVRLVAMPFLDSIMDETAAFGIALVLTLVEFIVCMVIYHVYKHDDLPSRARLVLVTVASCCMVGKMCLAWVAISPLKMD 864
            S+F LSG  W+RR LVAT LSL+ EA  TV +  YSPVLALVRVVEPLFES PQLLLQL+A+L  WTET  S  RL WR                         V SVCIS ASL+YAATDVSSVE L+T    + GE                                                  V+ FV LAM   V+  W   VL+YLW+SR +IV + A +  LDFRFRVRLVAMPF DSI+D    F  ALV TL+EF++C+ +YH Y  DDL + AR  L  V   CMVG   ++ +   P+  +
Sbjct:  108 SIFFLSGFQWYRRVLVATHLSLIYEAWTTVGDEQYSPVLALVRVVEPLFESVPQLLLQLYAMLILWTETMLSHGRLVWRXXXXXXXXXXXXXXXXXXXXXXXXXVGSVCISVASLAYAATDVSSVEFLAT----QTGE--------------------------------------------------VSYFVSLAMFFTVIRKWSSLVLLYLWMSRGVIVXIWASKTSLDFRFRVRLVAMPFTDSIVDGAVVFRGALVWTLLEFMLCLALYHAYAQDDLSASARRALTIVVCSCMVGLQTISAMHPPPVSAE 366          
BLAST of mRNA_E-fasciculatus_F_contig14346.3166.1 vs. uniprot
Match: A0A6H5JX78_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX78_9PHAE)

HSP 1 Score: 162 bits (410), Expect = 7.130e-44
Identity = 109/221 (49.32%), Postives = 136/221 (61.54%), Query Frame = 1
Query:  421 LRGLGNVHPRSHVWLCFVYHVLEIVARFVPLAMLVLVVGGWFFFVLMYLWVSRALIV-WMTAREGLDFRFRVRLVAMPFLDSIMDETAAFGIALVLTLVEFIVCMVIYHVYKHDDLPSRARLVLVTVASCCMVGKMCLAWVAISPLKMDGDHSESQGDGV-VGDGRGSAVTDESVANVEMSAIEDGKVEGGV-EASVASEPASPKGADGPSATSAVSMGSV 1074
            +RG G+VH R+HV  CFVYHVLEI  RF+PL ML++++  WF  VL YLW++R ++V W   +    FRFRVR VAMPFLDSI+D  AAF    VLTLV+ IV M  +  + HDDL    RL+LV V++ CM+GKM LAWVAI  LK      E   DG  V D RG    D      +M+ +EDG   G V EAS  SE    +G + P AT+  S GSV
Sbjct:    1 MRGSGDVHARTHVRFCFVYHVLEIGHRFLPLVMLLVLIRWWFILVLAYLWIARGVVVQWSDRKAVRAFRFRVRFVAMPFLDSILDGAAAFKAGFVLTLVKSIVFMASFLKFSHDDLSDSLRLMLVVVSAGCMLGKMFLAWVAIPLLK------EKDSDGAAVEDERGGEAADS-----DMTGVEDGTANGEVKEASTLSELGPKEGTNVPPATNGRSAGSV 210          
BLAST of mRNA_E-fasciculatus_F_contig14346.3166.1 vs. uniprot
Match: A0A6H5JIQ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIQ5_9PHAE)

HSP 1 Score: 169 bits (429), Expect = 2.340e-43
Identity = 151/453 (33.33%), Postives = 217/453 (47.90%), Query Frame = 1
Query:   31 WFRRFLVATQLSLLAEALITVTEADYSPVLALVRVVEPLFESAPQLLLQLHALLWGWTETTSSSSRLAWRVVSVCISAASLSYAATDVSSVERLSTCDGGKDGERFRICPCFPSLTGVVFSRVPAEGTSSL-RGLGNVHPRSHVWLCFVYHVLEIVARFVPLAMLVLVVGGWFFFVLMYLWVSRALIV--WMTAREGLDFRFRVRLVAMPFLDSIMDETAAFGIALVLTLVEFIVCMVIYHVYKHDD---LPSRARLVLVTVASCCMVGKMCLAWVAISPLKM-----------------------------DGDHSESQGDGVVGDGRG-SAVTDESVANVEMSAIEDGKVEGGVEAS--VASEPASPKGADGPSATSAVSMGSVVRSPGDVKVEDDSEGAEAGEFVGGSDLTRLEDGKIEDSAKAGGGSEVSPPEGTRLSPATHVLPMVST 1275
            W RR LVA QL +L  AL++   + YSPVLA +RV+EPL+ES PQL+LQL+ LL  W      +  L+ R++S+  S  SL+YA T + + + LS      D        C P LTG+VF  VPA  + ++ R   N   +  VW    Y VLEI A+F+ L +L LV   +FF  L +LW SRA ++   +     L  R + RLV MPF+DS+MD    + +   LT VEF+ C+ I +++  D+   LP+    V   VA+ CMVGK+CL ++ + P K                               G  S +  +G++GD R  +   DE    V   A    +V  G+  S  V     S    +     S V +G          ++   E   AG   G   +T +E+GK+         SEV+P EGT L P  H+L  V+T
Sbjct:  120 WLRRVLVALQLGMLFGALVSWGTSSYSPVLASLRVMEPLYESVPQLMLQLYGLLLEWDN--DGTMWLSRRLLSILFSCFSLAYATTGLVAEQALSRLAPTADAAS---ASC-PGLTGLVFGAVPANSSVAVYRSRWN--SQKFVWAFLFYQVLEIGAKFISLGLLALVWRAYFFLALFWLWGSRAYVLRRLIAGEHSLRVRSQFRLVGMPFMDSVMDVLQTYDVGCALTTVEFVFCLTIGNMFYTDEGGQLPTDVGRVWTYVAAVCMVGKLCLGYLIVRPFKRVVRFGTEQEEQTSGRQHGGGDVGGNGDVDPGGSSRADDEGMLGDTRARTGYGDEGSRGVVALASRGARVHEGMSLSRTVNRRTLSWTALEDSEEASRVGVG----------LDRQGEPGSAGSSAGLEMMTGMEEGKVT--------SEVAPSEGTDLEPVLHILTHVAT 546          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14346.3166.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D8LBY3_ECTSI1.400e-24885.16Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5JJ93_9PHAE9.370e-22783.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JL60_9PHAE4.640e-20379.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFI4_ECTSI4.350e-9962.76Leucine Rich Repeat protein n=1 Tax=Ectocarpus sil... [more]
A0A6H5K7Q2_9PHAE2.310e-9762.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KD04_9PHAE1.560e-8755.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCI0_9PHAE5.580e-5743.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K6W6_9PHAE1.690e-5143.77HTH psq-type domain-containing protein n=1 Tax=Ect... [more]
A0A6H5JX78_9PHAE7.130e-4449.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JIQ5_9PHAE2.340e-4333.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14346contigE-fasciculatus_F_contig14346:395..1711 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score714.9
Seed ortholog evalue2.3e-203
Seed eggNOG ortholog2880.D8LBY3
EggNOG free text desc.regulation of response to stimulus
EggNOG OGs2R960@2759,COG4886@1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-20_003745.1
Exons1
Model size1317
Cds size1317
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927924.6155927-CDS-E-fasciculatus_F_contig14346:394..17111622927924.6155927-CDS-E-fasciculatus_F_contig14346:394..1711Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14346 395..1711 -
1695995753.0566065-CDS-E-fasciculatus_F_contig14346:394..17111695995753.0566065-CDS-E-fasciculatus_F_contig14346:394..1711Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14346 395..1711 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14346.3166.1prot_E-fasciculatus_F_contig14346.3166.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig14346 395..1711 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig14346.3166.1

>prot_E-fasciculatus_F_contig14346.3166.1 ID=prot_E-fasciculatus_F_contig14346.3166.1|Name=mRNA_E-fasciculatus_F_contig14346.3166.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=439bp
MSLFCLSGIGWFRRFLVATQLSLLAEALITVTEADYSPVLALVRVVEPLF
ESAPQLLLQLHALLWGWTETTSSSSRLAWRVVSVCISAASLSYAATDVSS
VERLSTCDGGKDGERFRICPCFPSLTGVVFSRVPAEGTSSLRGLGNVHPR
SHVWLCFVYHVLEIVARFVPLAMLVLVVGGWFFFVLMYLWVSRALIVWMT
AREGLDFRFRVRLVAMPFLDSIMDETAAFGIALVLTLVEFIVCMVIYHVY
KHDDLPSRARLVLVTVASCCMVGKMCLAWVAISPLKMDGDHSESQGDGVV
GDGRGSAVTDESVANVEMSAIEDGKVEGGVEASVASEPASPKGADGPSAT
SAVSMGSVVRSPGDVKVEDDSEGAEAGEFVGGSDLTRLEDGKIEDSAKAG
GGSEVSPPEGTRLSPATHVLPMVSTVGGPDDGKVEDDL*
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mRNA from alignment at E-fasciculatus_F_contig14346:395..1711-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig14346.3166.1 ID=mRNA_E-fasciculatus_F_contig14346.3166.1|Name=mRNA_E-fasciculatus_F_contig14346.3166.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1317bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14346:395..1711- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGTCCTTGTTCTGTCTCTCCGGTATTGGGTGGTTCCGTCGTTTCTTGGT GGCGACCCAGTTGAGCTTGCTAGCCGAAGCCCTGATAACTGTTACAGAGG CGGACTACTCACCAGTTCTAGCGCTTGTGCGCGTCGTTGAGCCACTTTTT GAATCGGCGCCCCAGTTATTGCTCCAGCTGCATGCATTGCTTTGGGGTTG GACCGAGACAACCTCATCCTCTAGCCGCTTGGCATGGCGTGTAGTCTCCG TGTGCATCTCGGCGGCCAGTCTGTCCTATGCCGCCACCGATGTCTCCAGC GTAGAGAGGCTTTCCACTTGCGATGGCGGCAAGGATGGTGAGAGGTTCAG GATTTGCCCATGTTTTCCGTCCCTGACAGGAGTAGTGTTCAGTCGGGTGC CGGCGGAAGGAACCTCCAGTTTGAGAGGATTAGGTAACGTGCATCCGCGC AGTCACGTGTGGCTCTGCTTCGTGTACCACGTCCTTGAGATTGTTGCTCG CTTCGTCCCCCTGGCCATGCTAGTACTAGTGGTAGGTGGGTGGTTTTTCT TTGTGCTGATGTATCTGTGGGTAAGCCGGGCATTGATAGTTTGGATGACT GCCAGAGAAGGTCTGGACTTTCGATTTCGGGTGAGGCTGGTGGCCATGCC CTTCTTGGACTCCATCATGGACGAGACGGCAGCGTTTGGAATTGCCCTGG TATTGACGCTCGTGGAGTTCATCGTGTGCATGGTGATCTACCACGTGTAC AAGCACGATGACCTTCCCTCCCGCGCTAGGTTAGTGTTGGTTACCGTAGC CAGCTGCTGCATGGTCGGCAAGATGTGCTTGGCGTGGGTAGCAATATCCC CGCTCAAGATGGATGGGGATCATTCCGAGAGTCAAGGTGACGGTGTTGTT GGAGACGGACGAGGCAGCGCAGTGACGGACGAATCTGTAGCAAACGTGGA GATGTCGGCAATCGAGGACGGTAAGGTCGAGGGCGGAGTAGAGGCGAGCG TGGCTTCTGAGCCCGCATCTCCGAAGGGAGCAGACGGGCCATCCGCCACC TCTGCCGTTTCAATGGGTTCGGTAGTACGCAGCCCGGGAGATGTCAAGGT GGAGGATGATTCAGAGGGTGCAGAGGCAGGCGAGTTCGTAGGAGGGTCGG ATTTGACGAGATTGGAAGATGGTAAGATCGAGGATAGTGCCAAGGCTGGA GGAGGTTCTGAAGTATCACCTCCTGAGGGAACGCGCCTTTCACCCGCAAC GCATGTTTTGCCAATGGTCTCGACAGTAGGTGGCCCTGACGATGGTAAGG TGGAAGATGATTTGTAG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14346:395..1711-

>mRNA_E-fasciculatus_F_contig14346.3166.1 ID=mRNA_E-fasciculatus_F_contig14346.3166.1|Name=mRNA_E-fasciculatus_F_contig14346.3166.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2634bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14346:395..1711- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGTCCTTGTTCTGTCTCTCCGGTATTGGGTGGTTCCGTCGTTTCTTGGT
GGCGACCCAGTTGAGCTTGCTAGCCGAAGCCCTGATAACTGTTACAGAGG
CGGACTACTCACCAGTTCTAGCGCTTGTGCGCGTCGTTGAGCCACTTTTT
GAATCGGCGCCCCAGTTATTGCTCCAGCTGCATGCATTGCTTTGGGGTTG
GACCGAGACAACCTCATCCTCTAGCCGCTTGGCATGGCGTGTAGTCTCCG
TGTGCATCTCGGCGGCCAGTCTGTCCTATGCCGCCACCGATGTCTCCAGC
GTAGAGAGGCTTTCCACTTGCGATGGCGGCAAGGATGGTGAGAGGTTCAG
GATTTGCCCATGTTTTCCGTCCCTGACAGGAGTAGTGTTCAGTCGGGTGC
CGGCGGAAGGAACCTCCAGTTTGAGAGGATTAGGTAACGTGCATCCGCGC
AGTCACGTGTGGCTCTGCTTCGTGTACCACGTCCTTGAGATTGTTGCTCG
CTTCGTCCCCCTGGCCATGCTAGTACTAGTGGTAGGTGGGTGGTTTTTCT
TTGTGCTGATGTATCTGTGGGTAAGCCGGGCATTGATAGTTTGGATGACT
GCCAGAGAAGGTCTGGACTTTCGATTTCGGGTGAGGCTGGTGGCCATGCC
CTTCTTGGACTCCATCATGGACGAGACGGCAGCGTTTGGAATTGCCCTGG
TATTGACGCTCGTGGAGTTCATCGTGTGCATGGTGATCTACCACGTGTAC
AAGCACGATGACCTTCCCTCCCGCGCTAGGTTAGTGTTGGTTACCGTAGC
CAGCTGCTGCATGGTCGGCAAGATGTGCTTGGCGTGGGTAGCAATATCCC
CGCTCAAGATGGATGGGGATCATTCCGAGAGTCAAGGTGACGGTGTTGTT
GGAGACGGACGAGGCAGCGCAGTGACGGACGAATCTGTAGCAAACGTGGA
GATGTCGGCAATCGAGGACGGTAAGGTCGAGGGCGGAGTAGAGGCGAGCG
TGGCTTCTGAGCCCGCATCTCCGAAGGGAGCAGACGGGCCATCCGCCACC
TCTGCCGTTTCAATGGGTTCGGTAGTACGCAGCCCGGGAGATGTCAAGGT
GGAGGATGATTCAGAGGGTGCAGAGGCAGGCGAGTTCGTAGGAGGGTCGG
ATTTGACGAGATTGGAAGATGGTAAGATCGAGGATAGTGCCAAGGCTGGA
GGAGGTTCTGAAGTATCACCTCCTGAGGGAACGCGCCTTTCACCCGCAAC
GCATGTTTTGCCAATGGTCTCGACAGTAGGTGGCCCTGACGATGGTAAGG
TGGAAGATGATTTGTAGATGTCCTTGTTCTGTCTCTCCGGTATTGGGTGG
TTCCGTCGTTTCTTGGTGGCGACCCAGTTGAGCTTGCTAGCCGAAGCCCT
GATAACTGTTACAGAGGCGGACTACTCACCAGTTCTAGCGCTTGTGCGCG
TCGTTGAGCCACTTTTTGAATCGGCGCCCCAGTTATTGCTCCAGCTGCAT
GCATTGCTTTGGGGTTGGACCGAGACAACCTCATCCTCTAGCCGCTTGGC
ATGGCGTGTAGTCTCCGTGTGCATCTCGGCGGCCAGTCTGTCCTATGCCG
CCACCGATGTCTCCAGCGTAGAGAGGCTTTCCACTTGCGATGGCGGCAAG
GATGGTGAGAGGTTCAGGATTTGCCCATGTTTTCCGTCCCTGACAGGAGT
AGTGTTCAGTCGGGTGCCGGCGGAAGGAACCTCCAGTTTGAGAGGATTAG
GTAACGTGCATCCGCGCAGTCACGTGTGGCTCTGCTTCGTGTACCACGTC
CTTGAGATTGTTGCTCGCTTCGTCCCCCTGGCCATGCTAGTACTAGTGGT
AGGTGGGTGGTTTTTCTTTGTGCTGATGTATCTGTGGGTAAGCCGGGCAT
TGATAGTTTGGATGACTGCCAGAGAAGGTCTGGACTTTCGATTTCGGGTG
AGGCTGGTGGCCATGCCCTTCTTGGACTCCATCATGGACGAGACGGCAGC
GTTTGGAATTGCCCTGGTATTGACGCTCGTGGAGTTCATCGTGTGCATGG
TGATCTACCACGTGTACAAGCACGATGACCTTCCCTCCCGCGCTAGGTTA
GTGTTGGTTACCGTAGCCAGCTGCTGCATGGTCGGCAAGATGTGCTTGGC
GTGGGTAGCAATATCCCCGCTCAAGATGGATGGGGATCATTCCGAGAGTC
AAGGTGACGGTGTTGTTGGAGACGGACGAGGCAGCGCAGTGACGGACGAA
TCTGTAGCAAACGTGGAGATGTCGGCAATCGAGGACGGTAAGGTCGAGGG
CGGAGTAGAGGCGAGCGTGGCTTCTGAGCCCGCATCTCCGAAGGGAGCAG
ACGGGCCATCCGCCACCTCTGCCGTTTCAATGGGTTCGGTAGTACGCAGC
CCGGGAGATGTCAAGGTGGAGGATGATTCAGAGGGTGCAGAGGCAGGCGA
GTTCGTAGGAGGGTCGGATTTGACGAGATTGGAAGATGGTAAGATCGAGG
ATAGTGCCAAGGCTGGAGGAGGTTCTGAAGTATCACCTCCTGAGGGAACG
CGCCTTTCACCCGCAACGCATGTTTTGCCAATGGTCTCGACAGTAGGTGG
CCCTGACGATGGTAAGGTGGAAGATGATTTGTAG
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