prot_E-fasciculatus_F_contig14345.3165.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14345.3165.1
Unique Nameprot_E-fasciculatus_F_contig14345.3165.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length309
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig14345.3165.1 vs. uniprot
Match: D8LPJ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPJ0_ECTSI)

HSP 1 Score: 560 bits (1443), Expect = 7.600e-201
Identity = 270/300 (90.00%), Postives = 283/300 (94.33%), Query Frame = 0 
Query:    1 MLSDIVSLGPTSLISQYDGGCNFLYMGCLTKDVRGRWPLATTTALNCIITSTARLAELPLGPFRTKCLVQGLVRAVDTQQCDTLAWIVPRLPMEYALFTDKLSCAVIETGVVSAISYAIPLKKTKKNEAPPSFRMSVENAVRKGHVDAAKFLFTRYADRELRCAVAMAACLAGDDSLVQWCAGAMMSQFPPEATRALVYRGNIDALEWLKIHGKYSYTLMNQTVLYAALGGHVSAVDWVLDNNPGIGYDAGEVCLMVCRKGLLGILKHLIVRRGFWFHAPDCIRFAKKGSGIASWLKSRE 300
            MLSDI+SLGPTSLISQYDGG NF YMGCLTKDVRGRWPLATTTALNCII+ST RLAELP+GPFRTKCL+QGLVRAVDTQQCDTLAWIVPRLP+EYALFTDKLSCAVIETGVVSAISYAIPL +TKKNEAPP+FR+SVENAVRKGHVDAAKFLFTR+AD+ELR  V M ACL GDDSLV WCAGAMMSQFPPEATRALVYRGNIDAL WLK +GKYSYTLMNQTVLYAALGGHV AVDWVLDNNPGI YDAGEVCLMVCRKGLL ILKHL+VRRGFWFHA DCIRFAKKGSGIASWL SR+
Sbjct:    1 MLSDIISLGPTSLISQYDGGGNFFYMGCLTKDVRGRWPLATTTALNCIISSTTRLAELPIGPFRTKCLIQGLVRAVDTQQCDTLAWIVPRLPIEYALFTDKLSCAVIETGVVSAISYAIPLTRTKKNEAPPAFRVSVENAVRKGHVDAAKFLFTRFADKELRSTVVMTACLEGDDSLVHWCAGAMMSQFPPEATRALVYRGNIDALAWLKTNGKYSYTLMNQTVLYAALGGHVEAVDWVLDNNPGIRYDAGEVCLMVCRKGLLDILKHLVVRRGFWFHATDCIRFAKKGSGIASWLMSRD 300
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14345.3165.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LPJ0_ECTSI7.600e-20190.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14345contigE-fasciculatus_F_contig14345:1923..2849 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14345.3165.1mRNA_E-fasciculatus_F_contig14345.3165.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14345 1923..2849 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14345.3165.1 ID=prot_E-fasciculatus_F_contig14345.3165.1|Name=mRNA_E-fasciculatus_F_contig14345.3165.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=309bp
MLSDIVSLGPTSLISQYDGGCNFLYMGCLTKDVRGRWPLATTTALNCIIT
STARLAELPLGPFRTKCLVQGLVRAVDTQQCDTLAWIVPRLPMEYALFTD
KLSCAVIETGVVSAISYAIPLKKTKKNEAPPSFRMSVENAVRKGHVDAAK
FLFTRYADRELRCAVAMAACLAGDDSLVQWCAGAMMSQFPPEATRALVYR
GNIDALEWLKIHGKYSYTLMNQTVLYAALGGHVSAVDWVLDNNPGIGYDA
GEVCLMVCRKGLLGILKHLIVRRGFWFHAPDCIRFAKKGSGIASWLKSRE
LLLPLLRG*
back to top