prot_E-fasciculatus_F_contig14343.3163.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14343.3163.1
Unique Nameprot_E-fasciculatus_F_contig14343.3163.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length273
Homology
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BLAST of mRNA_E-fasciculatus_F_contig14343.3163.1 vs. uniprot
Match: A0A6H5KF55_9PHAE (USP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF55_9PHAE)

HSP 1 Score: 243 bits (620), Expect = 1.280e-69
Identity = 174/257 (67.70%), Postives = 186/257 (72.37%), Query Frame = 0 
Query:    8 ARGVAAGDPQVTPGRIGVSGGXXXXXXMTVMDVMRESEKAVMSETMTSAEAVLATAGLSTKDKDEAVVVPSGQYRHRHRRMGGVLGSESSFSSNC-------RSDLVPSDDAQFGDHDEDWPRAPNSPNASPYMDNHVDLDGEDXXXXXXXXXXXIPVHYGXXXXR-RGQVQ-RGDEEGLLALLPRRGVAGDPMEEXXXXXXXXXXXXXXXQARVEEHCRXXXXXXXXXXXXXXSMKRE-SAKQEELGPETEDEDLA 254
            ARGVAAGD QVTPGRIGVSG XXXXX MTVMDVMRESEKAVMSETMTSAEAVLA+AGLSTKD    +VVP+GQYR    RMGGVLGSESSFSSN        RSDLVPSDDAQFGDHDEDW R PNSPNASPY++NHVDLDG+  XXXXXXXX  IPVHYG      RGQ +  GD+EG+LALLPRR VA DPMEE               QA  EEHC               S+KRE SA  +ELGPETEDE+LA
Sbjct:  505 ARGVAAGDSQVTPGRIGVSG-XXXXXGMTVMDVMRESEKAVMSETMTSAEAVLASAGLSTKDS--TLVVPAGQYR----RMGGVLGSESSFSSNDSPGSTGGRSDLVPSDDAQFGDHDEDWARPPNSPNASPYIENHVDLDGD--XXXXXXXXGTIPVHYGADECHGRGQREDEGDDEGMLALLPRR-VARDPMEEDFDDDDASDGDDEG-QAIAEEHCSGGAGGGP-------SIKRELSAMVQELGPETEDEELA 743
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BLAST of mRNA_E-fasciculatus_F_contig14343.3163.1 vs. uniprot
Match: D7FK75_ECTSI (Ubiquitin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK75_ECTSI)

HSP 1 Score: 155 bits (391), Expect = 5.910e-39
Identity = 128/208 (61.54%), Postives = 139/208 (66.83%), Query Frame = 0 
Query:   57 EAVLATAGLSTKDKDEAVVVPSGQYRHRHRRMGGVLGSESSFSSNC-------RSDLVPSDDAQFGDHDEDWPRAPNSPNASPYMDNHVDLDGEDXXXXXXXXXXXIPVHYGXXXXRRGQVQRGDEEGLL--ALLPRRGVAGDPMEEXXXXXXXXXXXXXXXQARVEEHCRXXXXXXXXXXXXXXSMKRE-SAKQEELGPETEDEDLA 254
            +AVLA+AGLSTKD    VVVP+GQYR    RMGGVLGSESSFSSN        RSDLVPSDDAQFGDHDEDW   PNSPNASPYM+NHVDLDG+    XXXXXX  IPVH+G    +  Q +          ALLPRR VA DP   XXXXXXXXXXXXXXX      HC               S+KRE SAK++ELGPETEDEDLA
Sbjct: 2199 QAVLASAGLSTKDS--TVVVPAGQYR----RMGGVLGSESSFSSNDSPGSTGGRSDLVPSDDAQFGDHDEDWAPPPNSPNASPYMENHVDLDGD----XXXXXXGTIPVHFGANECKGRQREEXXXXXXXXXALLPRR-VARDPXXXXXXXXXXXXXXXXXXXXXXXXHCSGGDGGGPSGP----SIKRELSAKEQELGPETEDEDLA 2391
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14343.3163.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KF55_9PHAE1.280e-6967.70USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FK75_ECTSI5.910e-3961.54Ubiquitin domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14343contigE-fasciculatus_F_contig14343:1095..3334 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14343.3163.1mRNA_E-fasciculatus_F_contig14343.3163.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14343 1095..3334 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14343.3163.1 ID=prot_E-fasciculatus_F_contig14343.3163.1|Name=mRNA_E-fasciculatus_F_contig14343.3163.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=273bp
AGGGASAARGVAAGDPQVTPGRIGVSGGGGGGGGMTVMDVMRESEKAVMS
ETMTSAEAVLATAGLSTKDKDEAVVVPSGQYRHRHRRMGGVLGSESSFSS
NCRSDLVPSDDAQFGDHDEDWPRAPNSPNASPYMDNHVDLDGEDDDDDDE
DDDGTIPVHYGGDDERRGQVQRGDEEGLLALLPRRGVAGDPMEEDDFGDD
DASDGDDEGQARVEEHCRGGGGGNGGGPSGGPSMKRESAKQEELGPETED
EDLAGGGGLGSRSTSPSSSSSSS
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