mRNA_E-fasciculatus_F_contig14342.3162.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig14342.3162.1
Unique NamemRNA_E-fasciculatus_F_contig14342.3162.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig14342.3162.1 vs. uniprot
Match: D8LK21_ECTSI (Possible Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK21_ECTSI)

HSP 1 Score: 494 bits (1271), Expect = 2.470e-174
Identity = 240/246 (97.56%), Postives = 244/246 (99.19%), Query Frame = 1
Query:    1 KVRILRLLQHSNVVTIYQFFKDDPDYYYMVLENMEGGELFDRIVQKSYYNEEEARDLCRVLLDSVKYCHELGIVHRDLKPENLLLTSKHDDAGIKLADFGFACSVLNGPVSEQCGSPGYVAPEILRALPYGTSVDMWSVGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSLEAKDLIRRLLLVDPAKRMTATQAAEHPWLLTTGASLAGHNLGKNLDQLRIFNATRKLRGAIQSV 738
            +VRILRLLQHSNVV IYQFF+DDPDYYYMVLENM GGELFDRIVQKSYYNEEEARDLCRVLLDSV+YCHELGIVHRDLKPENLLLTSKHDDAGIKLADFGFACSVLNGPVSEQCGSPGYVAPEILRALPYGTSVDMWSVGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSLEAKDLIR+LLLVDPAKRMTATQAAEHPWLLTTGASLAGHNLGKNLDQLRIFNATRKLRGAIQSV
Sbjct:  130 EVRILRLLQHSNVVAIYQFFQDDPDYYYMVLENMAGGELFDRIVQKSYYNEEEARDLCRVLLDSVRYCHELGIVHRDLKPENLLLTSKHDDAGIKLADFGFACSVLNGPVSEQCGSPGYVAPEILRALPYGTSVDMWSVGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSLEAKDLIRKLLLVDPAKRMTATQAAEHPWLLTTGASLAGHNLGKNLDQLRIFNATRKLRGAIQSV 375          
BLAST of mRNA_E-fasciculatus_F_contig14342.3162.1 vs. uniprot
Match: A0A6H5KCN7_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCN7_9PHAE)

HSP 1 Score: 437 bits (1125), Expect = 1.520e-154
Identity = 213/218 (97.71%), Postives = 215/218 (98.62%), Query Frame = 1
Query:   85 MVLENMEGGELFDRIVQKSYYNEEEARDLCRVLLDSVKYCHELGIVHRDLKPENLLLTSKHDDAGIKLADFGFACSVLNGPVSEQCGSPGYVAPEILRALPYGTSVDMWSVGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSLEAKDLIRRLLLVDPAKRMTATQAAEHPWLLTTGASLAGHNLGKNLDQLRIFNATRKLRGAIQSV 738
            MVLENM GGELFDRIVQK+YYNEEEARDLCRVLLDSVKYCHELGIVHRDLKPENLLLTSKHDDAGIKLADFGFACSVLNGPVSEQCGSPGYVAPEILRALPYGTSVDMWSVGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSLEAKDLIR+LLLVDPAKRMTATQAAEHPWLLTTG SLA HNLGKNLDQLRIFNATRKLRGAIQSV
Sbjct:    1 MVLENMAGGELFDRIVQKTYYNEEEARDLCRVLLDSVKYCHELGIVHRDLKPENLLLTSKHDDAGIKLADFGFACSVLNGPVSEQCGSPGYVAPEILRALPYGTSVDMWSVGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSLEAKDLIRKLLLVDPAKRMTATQAAEHPWLLTTGESLASHNLGKNLDQLRIFNATRKLRGAIQSV 218          
BLAST of mRNA_E-fasciculatus_F_contig14342.3162.1 vs. uniprot
Match: A0A6H5K8A8_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8A8_9PHAE)

HSP 1 Score: 394 bits (1011), Expect = 3.650e-135
Identity = 186/246 (75.61%), Postives = 214/246 (86.99%), Query Frame = 1
Query:    1 KVRILRLLQHSNVVTIYQFFKDDPDYYYMVLENMEGGELFDRIVQKSYYNEEEARDLCRVLLDSVKYCHELGIVHRDLKPENLLLTSKHDDAGIKLADFGFACSVLNGPVSEQCGSPGYVAPEILRALPYGTSVDMWSVGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSLEAKDLIRRLLLVDPAKRMTATQAAEHPWLLTTGASLAGHNLGKNLDQLRIFNATRKLRGAIQSV 738
            +VRILR L+H NV+ IYQFFKDDPD YY+ +E M GGELFDRIV+K++YNE+EARDLCR+LLD+V+YCH+LGIVHRDLKPENLLLTS+HDDA +KLADFGFA S++ G VS QCG+PGYVAPEILRA  YGTSVDMWS+GVI+Y LLGGYPPFHDENQTRLFR+IKAG+FKFH EYW +TS EAKDLIRRLL VDP KR+TA QA  HPWLL+    L  HNLG NL+QLR+FNA RKLR AI+SV
Sbjct:  106 EVRILRSLKHPNVIDIYQFFKDDPDNYYVSIEYMRGGELFDRIVKKAFYNEKEARDLCRILLDAVRYCHDLGIVHRDLKPENLLLTSQHDDANVKLADFGFARSIMGGFVSTQCGTPGYVAPEILRAESYGTSVDMWSIGVIVYILLGGYPPFHDENQTRLFRKIKAGNFKFHPEYWQSTSSEAKDLIRRLLTVDPKKRLTAAQAVTHPWLLSKDDDLLKHNLGVNLEQLRLFNARRKLRAAIKSV 351          
BLAST of mRNA_E-fasciculatus_F_contig14342.3162.1 vs. uniprot
Match: A0A835YZ60_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ60_9STRA)

HSP 1 Score: 355 bits (910), Expect = 4.240e-120
Identity = 165/246 (67.07%), Postives = 201/246 (81.71%), Query Frame = 1
Query:    1 KVRILRLLQHSNVVTIYQFFKDDPDYYYMVLENMEGGELFDRIVQKSYYNEEEARDLCRVLLDSVKYCHELGIVHRDLKPENLLLTSKHDDAGIKLADFGFACSVLNGPVSEQCGSPGYVAPEILRALPYGTSVDMWSVGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSLEAKDLIRRLLLVDPAKRMTATQAAEHPWLLTTGASLAGHNLGKNLDQLRIFNATRKLRGAIQSV 738
            +V+ILR L H N++ IYQF++ + D YY+++E M GGELFDRIV+K +Y E+EARDLC++LLD++KYCH+  IVHRDLKPENLLLTS  DDA IKLADFGFA ++    V+ QCG+P YVAPEILR  PYGTSVDMWS+GVIIY LLGGYPPFHDENQTRLFR+I+AG F+FH+EYW + S +AKDLI RLL VD   R+TA +A  HPWLLT+   LA  NLGKNL+QL++FNA RKLR AI+SV
Sbjct:   88 EVKILRQLNHPNIIDIYQFYRQERDNYYVIIEYMRGGELFDRIVKKQFYTEKEARDLCKILLDAIKYCHDRDIVHRDLKPENLLLTSNDDDASIKLADFGFAKALNGSMVTTQCGTPAYVAPEILRHRPYGTSVDMWSIGVIIYILLGGYPPFHDENQTRLFRKIRAGKFEFHNEYWGSISSDAKDLISRLLTVDQHSRLTAREAVSHPWLLTSDTDLAARNLGKNLEQLKLFNARRKLRAAIKSV 333          
BLAST of mRNA_E-fasciculatus_F_contig14342.3162.1 vs. uniprot
Match: D8LEF0_ECTSI (Myosin light chain kinase (MLCK) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEF0_ECTSI)

HSP 1 Score: 353 bits (907), Expect = 3.350e-115
Identity = 164/246 (66.67%), Postives = 203/246 (82.52%), Query Frame = 1
Query:    1 KVRILRLLQHSNVVTIYQFFKDDPDYYYMVLENMEGGELFDRIVQKSYYNEEEARDLCRVLLDSVKYCHELGIVHRDLKPENLLLTSKHDDAGIKLADFGFACSVLNGPVSEQCGSPGYVAPEILRALPYGTSVDMWSVGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSLEAKDLIRRLLLVDPAKRMTATQAAEHPWLLTTGASLAGHNLGKNLDQLRIFNATRKLRGAIQSV 738
            +  I+R L H N+V+IY F++DDP ++YMVLE MEGGELFDRIVQK YYNE EARD+C   L+++KY H  G+VHRDLKPENLLL SK DD+ I+LADFGFA SVL+G V++QCG+PGYVAPEILR+ PYGTSVDMWS+GVIIY +L GYPPFHDE+Q RL+R+IKAG ++F  EYW++ S EAKDLIR+LL VDP +R+TA +A EHPWL T   +L  H+LG  L++L+IFNATRKLR AI+SV
Sbjct:  426 EANIMRELDHPNLVSIYDFYQDDPKFFYMVLELMEGGELFDRIVQKQYYNEAEARDVCLTFLEAMKYTHGQGVVHRDLKPENLLLASKSDDSSIRLADFGFAVSVLDGYVTDQCGTPGYVAPEILRSRPYGTSVDMWSIGVIIYIILAGYPPFHDEDQNRLYRKIKAGHYRFDPEYWNDVSSEAKDLIRKLLTVDPTRRLTAAEACEHPWLSTARGNLTQHDLGAGLEKLKIFNATRKLRAAIRSV 671          
BLAST of mRNA_E-fasciculatus_F_contig14342.3162.1 vs. uniprot
Match: A0A6H5K8I6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8I6_9PHAE)

HSP 1 Score: 347 bits (891), Expect = 1.000e-112
Identity = 161/243 (66.26%), Postives = 201/243 (82.72%), Query Frame = 1
Query:   10 ILRLLQHSNVVTIYQFFKDDPDYYYMVLENMEGGELFDRIVQKSYYNEEEARDLCRVLLDSVKYCHELGIVHRDLKPENLLLTSKHDDAGIKLADFGFACSVLNGPVSEQCGSPGYVAPEILRALPYGTSVDMWSVGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSLEAKDLIRRLLLVDPAKRMTATQAAEHPWLLTTGASLAGHNLGKNLDQLRIFNATRKLRGAIQSV 738
            I+  L H N+VTIY F++D+P ++YMVLE MEGGELFDRIVQK YYNE EARD+C  +L+++KY H  G+VHRDLKPENLLL SK DD+ I+LADFGFA SVL+G V++QCG+PGYVAPEILR  PYGTSVDMWS+GVIIY +L GYPPF DE+Q RL+R+IKAG ++F  EYW++ S EAKDLIR+LL+VDP +R+TA +A EHPWL T   +L  H+LG  L++L+IFNATRKLR AI++V
Sbjct:  424 IMHELNHPNLVTIYDFYRDNPKFFYMVLELMEGGELFDRIVQKQYYNEAEARDVCLTILEAIKYIHGQGVVHRDLKPENLLLASKSDDSSIRLADFGFAVSVLDGYVTDQCGTPGYVAPEILRGHPYGTSVDMWSIGVIIYIILAGYPPFCDEDQHRLYRKIKAGHYRFEPEYWNDVSSEAKDLIRKLLIVDPTRRLTAAEACEHPWLSTARGNLTKHDLGAGLEKLKIFNATRKLRAAIRTV 666          
BLAST of mRNA_E-fasciculatus_F_contig14342.3162.1 vs. uniprot
Match: A0A7S2XV40_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XV40_9STRA)

HSP 1 Score: 314 bits (804), Expect = 8.700e-104
Identity = 148/247 (59.92%), Postives = 189/247 (76.52%), Query Frame = 1
Query:    1 KVRILRLLQHSNVVTIYQFFKDDPDYYYMVLENMEGGELFDRIVQKSYYNEEEARDLCRVLLDSVKYCHELGIVHRDLKPENLLLTSKHDDAGIKLADFGFACSVL-NGPVSEQCGSPGYVAPEILRALPYGTSVDMWSVGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSLEAKDLIRRLLLVDPAKRMTATQAAEHPWLLTTGASLAGHNLGKNLDQLRIFNATRKLRGAIQSV 738
            +V IL+ + H N++ +Y+FF ++  +YY+V+E MEGGELFDRIVQK+YYNE+EARDL  +LL ++K+CH+ GIVHRDLKPENLLLTS  DDA IK+ADFGFA  V  +  ++ QCG+PGYVAPEIL  +PYG +VDMWS+GVI Y LLGGYPPFHDE Q+ LF +I+AG F FH EYW   S EAKDLIR+LL VDP KR+TA +A +HPW+     +LA  NL   L +LR FNA RK R  ++++
Sbjct:   75 EVTILKHVDHPNIIKLYEFF-EEKHFYYLVIELMEGGELFDRIVQKTYYNEKEARDLVHILLSAIKFCHDNGIVHRDLKPENLLLTSSKDDASIKIADFGFARQVKESNNLTTQCGTPGYVAPEILNGVPYGLAVDMWSIGVITYILLGGYPPFHDEKQSNLFAKIRAGDFVFHPEYWDPVSEEAKDLIRKLLTVDPNKRITAAEAMQHPWVTGADETLAARNLDSQLRELRRFNARRKFRSGVKAI 320          
BLAST of mRNA_E-fasciculatus_F_contig14342.3162.1 vs. uniprot
Match: A0A7S0SZL7_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SZL7_9STRA)

HSP 1 Score: 302 bits (773), Expect = 1.970e-100
Identity = 136/239 (56.90%), Postives = 185/239 (77.41%), Query Frame = 1
Query:   22 LQHSNVVTIYQFFKDDPDYYYMVLENMEGGELFDRIVQKSYYNEEEARDLCRVLLDSVKYCHELGIVHRDLKPENLLLTSKHDDAGIKLADFGFACSVLNGPVSEQCGSPGYVAPEILRALPYGTSVDMWSVGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSLEAKDLIRRLLLVDPAKRMTATQAAEHPWLLTTGASLAGHNLGKNLDQLRIFNATRKLRGAIQSV 738
            L H N++  Y FF+++ +YY +VLE M+GGELFDRIV+K+ YNE+EARD+ ++L+ ++KYCH+  +VHRDLKPENLLLTS+ DDA +K+ADFGFA  V +  +S QCG+PGY+APEIL   PYG +VDMWS+GVI Y +LGGYPPFHD+N   LFR+I+ G F+FH EYW+N S +AK+LI+ LL V+ + R+TA Q  +HPWL+T  A+LA  NL  NL + + FNA R+ +GA ++V
Sbjct:    2 LNHPNIINCYDFFEEEKNYY-VVLEYMDGGELFDRIVKKTVYNEKEARDVVKILVSAIKYCHDRDVVHRDLKPENLLLTSREDDASLKIADFGFAVRVNSNLLSTQCGTPGYIAPEILENKPYGKAVDMWSIGVITYIILGGYPPFHDDNMRNLFRKIRKGDFEFHPEYWNNVSSDAKNLIKGLLTVNASARLTADQVLQHPWLMTDDATLAAINLDSNLAEFKKFNAARRFKGAAKAV 239          
BLAST of mRNA_E-fasciculatus_F_contig14342.3162.1 vs. uniprot
Match: A0A6V1U2B4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1U2B4_HETAK)

HSP 1 Score: 300 bits (768), Expect = 1.010e-98
Identity = 140/246 (56.91%), Postives = 185/246 (75.20%), Query Frame = 1
Query:    1 KVRILRLLQHSNVVTIYQFFKDDPDYYYMVLENMEGGELFDRIVQKSYYNEEEARDLCRVLLDSVKYCHELGIVHRDLKPENLLLTSKHDDAGIKLADFGFACSVLNGPVSEQCGSPGYVAPEILRALPYGTSVDMWSVGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSLEAKDLIRRLLLVDPAKRMTATQAAEHPWLLTTGASLAGHNLGKNLDQLRIFNATRKLRGAIQSV 738
            +V ILR + H N++ ++ FF ++  +YY+V E M+GGELFDRIV+K++YNE+EARDL ++LL +VKYCH+  IVHRDLKPENLLL+S  DDA IK+ADFGFA  +    ++ QCG+PGYVAPEIL  +PYG SVDMWS GVI Y LLGGYPPFHDE Q+ LF +I++GS++FH EYW N S +A+DLI+++L VD A+R+TA  A  HPW+      LA   L  NL +LR FNA RK R  ++++
Sbjct:   77 EVTILRGISHPNIIKLFDFF-EEKHFYYLVTELMQGGELFDRIVKKTFYNEKEARDLVKILLSAVKYCHDNDIVHRDLKPENLLLSSAEDDASIKIADFGFARLLRGNTLTTQCGTPGYVAPEILNGVPYGKSVDMWSCGVITYILLGGYPPFHDEKQSNLFAKIRSGSYEFHPEYWQNVSKDAQDLIKKMLTVDIAQRITAEAACNHPWVQADADVLAKRGLDGNLTELRRFNARRKFRSGVKAI 321          
BLAST of mRNA_E-fasciculatus_F_contig14342.3162.1 vs. uniprot
Match: A0A836CHL2_9STRA (Putative calcium/calmodulin-dependent protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHL2_9STRA)

HSP 1 Score: 299 bits (766), Expect = 4.370e-98
Identity = 144/246 (58.54%), Postives = 188/246 (76.42%), Query Frame = 1
Query:    1 KVRILRLLQHSNVVTIYQFFKDDPDYYYMVLENMEGGELFDRIVQKSYYNEEEARDLCRVLLDSVKYCHELGIVHRDLKPENLLLTSKHDDAGIKLADFGFACSVLNGPVSEQCGSPGYVAPEILRALPYGTSVDMWSVGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSLEAKDLIRRLLLVDPAKRMTATQAAEHPWLLTTGASLAGHNLGKNLDQLRIFNATRKLRGAIQSV 738
            +V +LR + H NVV +YQF+  + D++Y+++E M+GGELF+RIV K  Y E+EAR +CRVLL +V+Y H+  +VHRDLKP+NLLLTS  DDA IKLADFGFA  +    +++ CG+P Y+APEIL   PYG +VDMWS+G IIY LLGGY PF D+NQTRLFR+I+ G++ FH EYWS+ S EAKDLIR  L VD  KR+TA QA EHPWL  +   L G+ L K+L++L++FNA RKLRGAI++V
Sbjct:   91 EVAVLREMAHPNVVNVYQFYPREKDHFYVIMEYMKGGELFERIVAKQVYTEKEARAVCRVLLATVRYLHDHDVVHRDLKPDNLLLTSDADDANIKLADFGFAKKLDGQKLTQLCGTPNYIAPEILLHEPYGVTVDMWSLGCIIYILLGGYLPFVDDNQTRLFRKIRNGAYSFHPEYWSDISDEAKDLIRGCLNVDAEKRLTAAQAMEHPWLAVSDDCLGGNCLDKSLERLQLFNARRKLRGAIRTV 336          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14342.3162.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LK21_ECTSI2.470e-17497.56Possible Ca2+/calmodulin-dependent protein kinase,... [more]
A0A6H5KCN7_9PHAE1.520e-15497.71Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A6H5K8A8_9PHAE3.650e-13575.61Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A835YZ60_9STRA4.240e-12067.07Kinase-like domain-containing protein n=1 Tax=Trib... [more]
D8LEF0_ECTSI3.350e-11566.67Myosin light chain kinase (MLCK) n=1 Tax=Ectocarpu... [more]
A0A6H5K8I6_9PHAE1.000e-11266.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2XV40_9STRA8.700e-10459.92Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S0SZL7_9STRA1.970e-10056.90Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A6V1U2B4_HETAK1.010e-9856.91Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A836CHL2_9STRA4.370e-9858.54Putative calcium/calmodulin-dependent protein kina... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14342contigE-fasciculatus_F_contig14342:53..2790 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score314.3
Seed ortholog evalue5e-83
Seed eggNOG ortholog2880.D8LGW1
KEGG koko:K08794
KEGG Pathwayko04921,ko04925,map04921,map04925
EggNOG free text desc.calmodulin-dependent protein kinase activity
EggNOG OGsKOG0032@1,KOG0032@2759,KOG0033@1,KOG0033@2759
EC2.7.11.17
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPossible Ca2 /calmodulin-dependent protein kinase, EF-Hand protein superfamily
Ec32 orthologEc-06_007870.1
Exons4
Model size738
Cds size738
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14342.3162.1prot_E-fasciculatus_F_contig14342.3162.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig14342 53..2790 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927924.2693753-CDS-E-fasciculatus_F_contig14342:52..2351622927924.2693753-CDS-E-fasciculatus_F_contig14342:52..235Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14342 53..235 -
1695995752.9273386-CDS-E-fasciculatus_F_contig14342:52..2351695995752.9273386-CDS-E-fasciculatus_F_contig14342:52..235Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14342 53..235 -
1622927924.2905877-CDS-E-fasciculatus_F_contig14342:1101..12601622927924.2905877-CDS-E-fasciculatus_F_contig14342:1101..1260Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14342 1102..1260 -
1695995752.941217-CDS-E-fasciculatus_F_contig14342:1101..12601695995752.941217-CDS-E-fasciculatus_F_contig14342:1101..1260Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14342 1102..1260 -
1622927924.3119755-CDS-E-fasciculatus_F_contig14342:1626..18841622927924.3119755-CDS-E-fasciculatus_F_contig14342:1626..1884Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14342 1627..1884 -
1695995752.9519982-CDS-E-fasciculatus_F_contig14342:1626..18841695995752.9519982-CDS-E-fasciculatus_F_contig14342:1626..1884Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14342 1627..1884 -
1622927924.32449-CDS-E-fasciculatus_F_contig14342:2652..27901622927924.32449-CDS-E-fasciculatus_F_contig14342:2652..2790Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14342 2653..2790 -
1695995752.9619894-CDS-E-fasciculatus_F_contig14342:2652..27901695995752.9619894-CDS-E-fasciculatus_F_contig14342:2652..2790Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14342 2653..2790 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig14342.3162.1

>prot_E-fasciculatus_F_contig14342.3162.1 ID=prot_E-fasciculatus_F_contig14342.3162.1|Name=mRNA_E-fasciculatus_F_contig14342.3162.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=246bp
KVRILRLLQHSNVVTIYQFFKDDPDYYYMVLENMEGGELFDRIVQKSYYN
EEEARDLCRVLLDSVKYCHELGIVHRDLKPENLLLTSKHDDAGIKLADFG
FACSVLNGPVSEQCGSPGYVAPEILRALPYGTSVDMWSVGVIIYTLLGGY
PPFHDENQTRLFRRIKAGSFKFHDEYWSNTSLEAKDLIRRLLLVDPAKRM
TATQAAEHPWLLTTGASLAGHNLGKNLDQLRIFNATRKLRGAIQSV
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mRNA from alignment at E-fasciculatus_F_contig14342:53..2790-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig14342.3162.1 ID=mRNA_E-fasciculatus_F_contig14342.3162.1|Name=mRNA_E-fasciculatus_F_contig14342.3162.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2738bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14342:53..2790- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AAGGTACGGATACTCCGCCTCCTGCAGCACTCGAACGTGGTGACCATTTA CCAGTTCTTCAAGGACGATCCTGACTACTACTACATGGTGCTGGAGAACA TGGAAGGGGGCGAGCTGTTTGACCGCATCGTTCAGAAGGTGTGATAACAT CACCGAGAGGGAGAGAGAGAGAACATGAAACGGTTCGATGGTAGCGGGAT CACCATCATCGAGATCCAGCTTTCGTTCCCACTGCAGGCTGAGGGTGGGG AACGGGGCGAGAAAGAGGAAGCAGTGGTGGCCTTCGCGACGATATTAAGC TTGACTTAGTTAGCGTTAGGGATAGGGGTATGAAACCCCCCTCTCTCTAT TACAGATTGATATTACATGTATATGTGAGTTCTGGTTTAATGTGATGAAA AACGAAGGCGGTCCAGAGGAAAGAAGAGAAGAGAGGAGAAGAGGGGTACA ATAGTACAATTGTAGGGGTGGGGTGGGGGCACAACACCCGCATGAACTGA CGGCCATTTTCGTCCGTGGTGCGGCGCGGAATGATGTTGGTCGCGGCCAT CACATGTCGCAAGCGTTGTCGTTGCTACTTTTGATTCACACCTGACGTGT TTTCGTTGGTCGACCGATTTTCGCGCGGTCGATGCTACAGAGTTGACAGA CACACGCACATTTCCAGACCATGGCCTTCATAGAAGTATTTTGTGTTTTC CACCGCACTGAGACTGACGTTTTTTCATTGGTCAGCCGGTGAGCGCGGTC GATGCTAATCATAAACACACACACACACACACACACACACACACACACGC GCGCGCGTGCTTGCTTGCTTGCTTCCTTGTTTCCTTCCTTCTTTCCTTCC TTGATTTGCTCACTTGCTTGCTTTTCCGCCGCCCACCACCGCCACCGTCG CCTCAGTCGTACTACAACGAGGAGGAGGCGAGAGACCTGTGCCGCGTGCT GCTGGACTCGGTCAAATACTGCCACGAGCTGGGCATCGTCCACCGTGACC TCAAGCCGGAGAACCTCCTCCTCACCTCCAAGCACGACGACGCCGGCATC AAGCTCGCGGACTTCGGCTTCGCCTGCAGCGTGCTCAACGGCCCCGTGTC GGAGCAGTGCGGGTCGCCGGGTTACGTGGCGCCGGAGATCCTCAGGGCGC TGCCGTACGGAACGGTGAGAGCATGCACACCAAGAGCATTTTTACGTGGG GGGGCAAGTCTTTCTTAACGCGGAGCCAGGAAGACGAAACGCACGAGTTT CGCCGTGATGCGCTTGTGCTCCTCCCCTCCTGTCACGCCCGTACCCCGAC GTTTTTTGGGGGGTGGGGTTATGACCACGGCTAATTGCTGGTTCATTTTG TCACGACGGCAGCAACTGATGACACTCTGTCTCTCCCTTTCTCTCTCACA CACACACACCGCTCGGCTCTAACTAAACTTCATTTTGCGACATTTGCCCA TTTTGCTTGCGCTTTGTCCTTCCTCAACTGCCGTGCCATATCTTGATTGA TTCACCCCGGTACCAAACAAAAAAAAAAAGTCGGTGGATATGTGGAGTGT GGGCGTGATCATCTATACCTTGCTCGGGGGCTACCCGCCCTTCCACGACG AGAACCAGACGCGACTTTTCCGCCGGATCAAGGCCGGGAGCTTCAAGTTC CACGACGAGTACTGGAGCAACACCTCGCTCGAGGCCAAGGTGCGCTGCCG TCTTGACCAAAAGTACGGCGGATAATATCTTTAGTGAAAAATTCTCATCC ATTGGCACGGGGGCATGCATCAAAACGCACCTGCGCCTGTCGGAAAAAAG GATGTGCGTGCTTCGTGGTAGGTACTTGTTGTCTATTCGGTCGTGTTGGC AAAATGTGATGGCTGGCTACGGCGTTGATGGTTGGCACGCGCGGGTGGGT GTGCGCGGGCTGTGGTGCTTCCGCTTCCGTTTTACTCGTCGTGTACGTGT AATCTACATCTACATTCGGAGTGAGTGCCTAGAAACGCTGGTCCGGTGAT TGCTTTTACGCGTGAGCGCATGGGGAGCCGCAAACACACATGCACCACCG AGAGCCGCACTGAGGCTGGCGTGTTTCCGTTGGTCAGCCGTGTAGCGCTA CCGATGCTACAATAGTTACACACATCAACATACGCGCGCGGTCGGATCAC CTGGCATTCGTCTGCCAACGAACTACTAGATGCGCCGTCGACGTGTCTGC TCTTATGGCTCTTATGGTAAGTGTTTTCTGCTCCCTCTGGGCAGACTCTC GCCCAACCACACCCGCACATCCACACCCGCATACCCACACCCACAGAGTA ATCTTCGCAGTTTTTTTTTATCAAGTAAACATGCTGGATAAAGCATGCAA TCGGAGAAGTTGGGATAGCGTTAGGGATAGGGTCTGCGTAGTCTCCAAAG GTTCAGTTTTTTTCAGCCTACTCTAAATCTCATACAACCAACAATGTGTA TGTATGACTTGCCACACTAAATCCTATACTTTCCTTGTTTTGTCGCAAAG GCGGCCCCACCCACACGCACACCCACACCCGCACACCTACACCTACACAC CACAGGACCTTATCCGGAGGCTTCTCCTGGTGGACCCGGCGAAGCGAATG ACGGCGACCCAGGCGGCGGAGCACCCCTGGCTGCTCACCACGGGAGCGTC CCTCGCCGGACACAACTTGGGCAAGAACCTTGACCAGCTCAGAATCTTCA ACGCCACGAGGAAGCTGAGAGGCGCCATCCAGTCGGTG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14342:53..2790-

>mRNA_E-fasciculatus_F_contig14342.3162.1 ID=mRNA_E-fasciculatus_F_contig14342.3162.1|Name=mRNA_E-fasciculatus_F_contig14342.3162.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1476bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14342:53..2790- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AAGGTACGGATACTCCGCCTCCTGCAGCACTCGAACGTGGTGACCATTTA
CCAGTTCTTCAAGGACGATCCTGACTACTACTACATGGTGCTGGAGAACA
TGGAAGGGGGCGAGCTGTTTGACCGCATCGTTCAGAAGAAGGTACGGATA
CTCCGCCTCCTGCAGCACTCGAACGTGGTGACCATTTACCAGTTCTTCAA
GGACGATCCTGACTACTACTACATGGTGCTGGAGAACATGGAAGGGGGCG
AGCTGTTTGACCGCATCGTTCAGAAGTCGTACTACAACGAGGAGGAGGCG
AGAGACCTGTGCCGCGTGCTGCTGGACTCGGTCAAATACTGCCACGAGCT
GGGCATCGTCCACCGTGACCTCAAGCCGGAGAACCTCCTCCTCACCTCCA
AGCACGACGACGCCGGCATCAAGCTCGCGGACTTCGGCTTCGCCTGCAGC
GTGCTCAACGGCCCCGTGTCGGAGCAGTGCGGGTCGCCGGGTTACGTGGC
GCCGGAGATCCTCAGGGCGCTGCCGTACGGAACGTCGTACTACAACGAGG
AGGAGGCGAGAGACCTGTGCCGCGTGCTGCTGGACTCGGTCAAATACTGC
CACGAGCTGGGCATCGTCCACCGTGACCTCAAGCCGGAGAACCTCCTCCT
CACCTCCAAGCACGACGACGCCGGCATCAAGCTCGCGGACTTCGGCTTCG
CCTGCAGCGTGCTCAACGGCCCCGTGTCGGAGCAGTGCGGGTCGCCGGGT
TACGTGGCGCCGGAGATCCTCAGGGCGCTGCCGTACGGAACGTCGGTGGA
TATGTGGAGTGTGGGCGTGATCATCTATACCTTGCTCGGGGGCTACCCGC
CCTTCCACGACGAGAACCAGACGCGACTTTTCCGCCGGATCAAGGCCGGG
AGCTTCAAGTTCCACGACGAGTACTGGAGCAACACCTCGCTCGAGGCCAA
GTCGGTGGATATGTGGAGTGTGGGCGTGATCATCTATACCTTGCTCGGGG
GCTACCCGCCCTTCCACGACGAGAACCAGACGCGACTTTTCCGCCGGATC
AAGGCCGGGAGCTTCAAGTTCCACGACGAGTACTGGAGCAACACCTCGCT
CGAGGCCAAGGACCTTATCCGGAGGCTTCTCCTGGTGGACCCGGCGAAGC
GAATGACGGCGACCCAGGCGGCGGAGCACCCCTGGCTGCTCACCACGGGA
GCGTCCCTCGCCGGACACAACTTGGGCAAGAACCTTGACCAGCTCAGAAT
CTTCAACGCCACGAGGAAGCTGAGAGGCGCCATCCAGTCGGTGGACCTTA
TCCGGAGGCTTCTCCTGGTGGACCCGGCGAAGCGAATGACGGCGACCCAG
GCGGCGGAGCACCCCTGGCTGCTCACCACGGGAGCGTCCCTCGCCGGACA
CAACTTGGGCAAGAACCTTGACCAGCTCAGAATCTTCAACGCCACGAGGA
AGCTGAGAGGCGCCATCCAGTCGGTG
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