mRNA_E-fasciculatus_F_contig1433.3156.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1433.3156.1 vs. uniprot
Match: D7FYC2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYC2_ECTSI) HSP 1 Score: 704 bits (1816), Expect = 1.380e-247 Identity = 402/431 (93.27%), Postives = 413/431 (95.82%), Query Frame = 1
Query: 1 KAKAELDLQRAQVEWESQALDNHRSTVARDNTRQTELLDNHMQDLAQLAKLKEDNEALKKGQDQLRVEVKKCERQREQAQEETARKEEDLATSRGEVVEANEELDRLRGKFRDQLENLVSGKAGTKASRRXXXXXXXXXXXNGEANKRAALEEMVGSYKEREERATADAKRLREEARDAKLKNRALFDRYKQLRGIFEDSLGEGELPPDLPSDDKLIAAGAVASGGRESDAEAQSALKARLKVAESELSSQQEKNVLSAGEYSERVATLEQQLREDSLQIGRLEHENLSLSKALDNASGGQQLQDMQAMVMKMASAPAARVRTPPSAGGSRDMRVRVRQAEEERDRALDEIATLRLKQRSQGRGGGGHEVQELVKELERIERTNAALVSTKATLESELLRFKEYMRDTVSRYQETIRQLQQELKKTKGGFG 1293
KAKAELDLQRAQVEWESQALDNHRSTVARDNTRQ ELLDNHMQDLAQLAKLKEDNEALKKGQDQLRVEVKKCER+ EQAQEETARKEEDLATSR E+VEANEELDRLR KFRDQLENLVSGKAGTKASRR +G+ANKRAALEEMVGSYKEREERATADAKRLREEA+DAKLKNRALFDRYKQLRGIFEDSLGEGELPPDLPSDDKLIAAGAVA GGRESDAEAQSALKARLKVAESELS+QQEKNVL+AGEYSERVATLEQQLREDSLQIGRLEHENLSLSKALDNASGGQQLQDMQAMVMKMASAPAARVRTPPSAGGSRDMRVRVRQAEEERDRAL+E+ATLRL+Q SQGRGGGGHEVQELVKELERIERTNA LVS+KATLESELLRFKEYMRDTVSRYQETIRQLQQELKKTKGGFG
Sbjct: 384 KAKAELDLQRAQVEWESQALDNHRSTVARDNTRQAELLDNHMQDLAQLAKLKEDNEALKKGQDQLRVEVKKCERRCEQAQEETARKEEDLATSRDELVEANEELDRLRRKFRDQLENLVSGKAGTKASRRKKDDQNSDGG-SGDANKRAALEEMVGSYKEREERATADAKRLREEAKDAKLKNRALFDRYKQLRGIFEDSLGEGELPPDLPSDDKLIAAGAVAVGGRESDAEAQSALKARLKVAESELSAQQEKNVLTAGEYSERVATLEQQLREDSLQIGRLEHENLSLSKALDNASGGQQLQDMQAMVMKMASAPAARVRTPPSAGGSRDMRVRVRQAEEERDRALNEVATLRLEQGSQGRGGGGHEVQELVKELERIERTNAGLVSSKATLESELLRFKEYMRDTVSRYQETIRQLQQELKKTKGGFG 813 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1433.3156.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1433.3156.1 >prot_E-fasciculatus_F_contig1433.3156.1 ID=prot_E-fasciculatus_F_contig1433.3156.1|Name=mRNA_E-fasciculatus_F_contig1433.3156.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=432bp KAKAELDLQRAQVEWESQALDNHRSTVARDNTRQTELLDNHMQDLAQLAKback to top mRNA from alignment at E-fasciculatus_F_contig1433:11569..17733- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1433.3156.1 ID=mRNA_E-fasciculatus_F_contig1433.3156.1|Name=mRNA_E-fasciculatus_F_contig1433.3156.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=6165bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1433:11569..17733- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1433:11569..17733- >mRNA_E-fasciculatus_F_contig1433.3156.1 ID=mRNA_E-fasciculatus_F_contig1433.3156.1|Name=mRNA_E-fasciculatus_F_contig1433.3156.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2592bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1433:11569..17733- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |