mRNA_E-fasciculatus_F_contig14328.3153.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14328.3153.1 vs. uniprot
Match: D7FUM0_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUM0_ECTSI) HSP 1 Score: 171 bits (433), Expect = 1.630e-47 Identity = 87/93 (93.55%), Postives = 90/93 (96.77%), Query Frame = 1
Query: 1 NPADQMDTIGVGAVSADGRGLASFQSRGMTTWELPGGYGRVKPDLVAVGQHVLGPKAGGPLGQCSGLSGTSVASPVVAGAAALLASTVPPERR 279
NPADQMDTIGVGAVSA GRG+ASFQSRGMTTWELPGGYGRVKPDLVAVGQ VLGPKAGGPLGQCSG+SGTSVA PVVAGAAALLASTVPP+RR
Sbjct: 553 NPADQMDTIGVGAVSASGRGVASFQSRGMTTWELPGGYGRVKPDLVAVGQFVLGPKAGGPLGQCSGISGTSVACPVVAGAAALLASTVPPDRR 645
BLAST of mRNA_E-fasciculatus_F_contig14328.3153.1 vs. uniprot
Match: A0A6H5K166_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K166_9PHAE) HSP 1 Score: 167 bits (424), Expect = 2.700e-46 Identity = 86/93 (92.47%), Postives = 89/93 (95.70%), Query Frame = 1
Query: 1 NPADQMDTIGVGAVSADGRGLASFQSRGMTTWELPGGYGRVKPDLVAVGQHVLGPKAGGPLGQCSGLSGTSVASPVVAGAAALLASTVPPERR 279
NPADQMDTIGVGAVSA GR +ASFQSRGMTTWELPGGYGRVKPDLVAVGQ VLGPKAGG LGQCSG+SGTSVASPVVAGAAALLASTVPP+RR
Sbjct: 828 NPADQMDTIGVGAVSASGRAVASFQSRGMTTWELPGGYGRVKPDLVAVGQFVLGPKAGGSLGQCSGISGTSVASPVVAGAAALLASTVPPDRR 920
BLAST of mRNA_E-fasciculatus_F_contig14328.3153.1 vs. uniprot
Match: A0A7S2STL8_9STRA (Subtilisin (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STL8_9STRA) HSP 1 Score: 110 bits (275), Expect = 7.940e-28 Identity = 64/93 (68.82%), Postives = 66/93 (70.97%), Query Frame = 1
Query: 1 NPADQMDTIGVGAVSADGRGLASFQSRGMTTWELPGGYGRVKPDLVAVGQHVLG----PKAGGPLGQCSGLSGTSVASPVVAGAAALLASTVP 267
NPADQ+DTIGVG V+ G GLA F SRGMTTWELP GYGR KPDL A GQ VLG P G C LSGTSVASPVVAGA ALLAS P
Sbjct: 115 NPADQVDTIGVGGVTGGG-GLARFSSRGMTTWELPFGYGRFKPDLTAQGQSVLGSKVAPSGTTAAGHCRALSGTSVASPVVAGAVALLASLAP 206
BLAST of mRNA_E-fasciculatus_F_contig14328.3153.1 vs. uniprot
Match: A0A2P6NXW7_9EUKA (Membrane-bound transcription factor protease, site 1 n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NXW7_9EUKA) HSP 1 Score: 114 bits (284), Expect = 2.050e-27 Identity = 60/93 (64.52%), Postives = 72/93 (77.42%), Query Frame = 1
Query: 1 NPADQMDTIGVGAVSADGRGLASFQSRGMTTWELPGGYGRVKPDLVAVGQHVLGPKAGGPLGQCSGLSGTSVASPVVAGAAALLASTVPPERR 279
NPADQ+D IGVG + DG+ LA F SRGMTTWE+P GYGRVKPD++ GQ+V G + P G+C LSGTSVASPVVAG ALL S++PPE+R
Sbjct: 343 NPADQLDVIGVGGLKLDGK-LAEFSSRGMTTWEIPEGYGRVKPDVITFGQNVDGSR---PDGECRKLSGTSVASPVVAGVLALLISSIPPEQR 431
BLAST of mRNA_E-fasciculatus_F_contig14328.3153.1 vs. uniprot
Match: A0A7S4P617_GUITH (Hypothetical protein (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4P617_GUITH) HSP 1 Score: 113 bits (282), Expect = 3.730e-27 Identity = 63/93 (67.74%), Postives = 69/93 (74.19%), Query Frame = 1
Query: 1 NPADQMDTIGVGAVSADGRGLASFQSRGMTTWELPGGYGRVKPDLVAVGQHVLGPKAGGPLGQCSGLSGTSVASPVVAGAAALLASTVPPERR 279
NPADQ+D IGVG + GR +ASF SRGMTTWELP GYGRVKPD+VA G+ V G G C LSGTSVASPVV GA ALLAST+P ERR
Sbjct: 241 NPADQLDVIGVGGIDYAGR-IASFSSRGMTTWELPRGYGRVKPDIVAYGRDVPGASING---GCRSLSGTSVASPVVTGAVALLASTIPGERR 329
BLAST of mRNA_E-fasciculatus_F_contig14328.3153.1 vs. uniprot
Match: A0A6B2KXI5_9EUKA (Peptidase_S8 domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2KXI5_9EUKA) HSP 1 Score: 112 bits (279), Expect = 9.710e-27 Identity = 58/93 (62.37%), Postives = 70/93 (75.27%), Query Frame = 1
Query: 1 NPADQMDTIGVGAVSADGRGLASFQSRGMTTWELPGGYGRVKPDLVAVGQHVLGPKAGGPLGQCSGLSGTSVASPVVAGAAALLASTVPPERR 279
NPADQ+D IGVG ++ +A F SRGMTTWE+PGGYGRVKPD++A Q+V+G P G C LSGTSV SPVVAGA LLAS++PPE+R
Sbjct: 295 NPADQLDVIGVGGITFKDN-IAKFSSRGMTTWEIPGGYGRVKPDVLAYSQNVMGST---PNGDCKDLSGTSVGSPVVAGAVTLLASSIPPEKR 383
BLAST of mRNA_E-fasciculatus_F_contig14328.3153.1 vs. uniprot
Match: C1N6E8_MICPC (Predicted protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1N6E8_MICPC) HSP 1 Score: 110 bits (276), Expect = 2.470e-26 Identity = 61/93 (65.59%), Postives = 69/93 (74.19%), Query Frame = 1
Query: 1 NPADQMDTIGVGAVSADGRGLASFQSRGMTTWELPGGYGRVKPDLVAVGQHVLGPKAGGPLGQCSGLSGTSVASPVVAGAAALLASTVPPERR 279
NPADQMD +GVG + + + +ASF SRGM+TWELP GYGRVKPD+VA G+ V G K G C LSGTSVASPVVAGA LLAS VP ERR
Sbjct: 271 NPADQMDVLGVGGIDYNDK-IASFSSRGMSTWELPNGYGRVKPDVVAYGRDVSGSKING---GCRSLSGTSVASPVVAGAVTLLASVVPKERR 359
BLAST of mRNA_E-fasciculatus_F_contig14328.3153.1 vs. uniprot
Match: A0A0L0DGQ0_THETB (Peptidase_S8 domain-containing protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DGQ0_THETB) HSP 1 Score: 109 bits (273), Expect = 6.260e-26 Identity = 64/93 (68.82%), Postives = 67/93 (72.04%), Query Frame = 1
Query: 1 NPADQMDTIGVGAVSADGRGLASFQSRGMTTWELPGGYGRVKPDLVAVGQHVLGPKAGGPLGQCSGLSGTSVASPVVAGAAALLASTVPPERR 279
NP DQ+D IGVG V R LA F SRGMTTWELPGGYGRVKPD+VA V G A G C LSGTSVASPVVAGA ALLASTVP E+R
Sbjct: 231 NPGDQLDVIGVGGVDGMER-LAKFSSRGMTTWELPGGYGRVKPDVVAYATAVRGLAADG---SCRTLSGTSVASPVVAGAVALLASTVPAEKR 319
BLAST of mRNA_E-fasciculatus_F_contig14328.3153.1 vs. uniprot
Match: A0A150GIF0_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GIF0_GONPE) HSP 1 Score: 108 bits (271), Expect = 1.160e-25 Identity = 64/96 (66.67%), Postives = 70/96 (72.92%), Query Frame = 1
Query: 1 NPADQMDTIGVGAVSADGRGLASFQSRGMTTWELPGGYGRVKPDLVAVGQHVLGPKAGGPLGQCSGLSGTSVASPVVAGAAALLASTV---PPERR 279
NPADQ D IGVG + A G+A F SRGMTTWELP GYGRVKPD++A + V+G K GG C LSGTSVASPVVAGA ALLASTV PERR
Sbjct: 598 NPADQNDVIGVGGIDA-WDGIAGFSSRGMTTWELPRGYGRVKPDVMAYAKDVMGSKIGG---GCKALSGTSVASPVVAGAVALLASTVLPSQPERR 689
BLAST of mRNA_E-fasciculatus_F_contig14328.3153.1 vs. uniprot
Match: A0A1Y1I8T3_KLENI (Membrane-bound transcription factor site-1 protease n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I8T3_KLENI) HSP 1 Score: 108 bits (269), Expect = 2.210e-25 Identity = 60/93 (64.52%), Postives = 67/93 (72.04%), Query Frame = 1
Query: 1 NPADQMDTIGVGAVSADGRGLASFQSRGMTTWELPGGYGRVKPDLVAVGQHVLGPKAGGPLGQCSGLSGTSVASPVVAGAAALLASTVPPERR 279
NPADQ D IGVG + +A+F SRGM+TWELP GYGRVKPD+VA G+ V+G K G C LSGTSVASPVVAGA LLAS VP ERR
Sbjct: 577 NPADQSDVIGVGGIDYSDA-IAAFSSRGMSTWELPHGYGRVKPDIVAYGRDVIGSKISG---GCKSLSGTSVASPVVAGAVCLLASVVPEERR 665 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14328.3153.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14328.3153.1 >prot_E-fasciculatus_F_contig14328.3153.1 ID=prot_E-fasciculatus_F_contig14328.3153.1|Name=mRNA_E-fasciculatus_F_contig14328.3153.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=88bp MDTIGVGAVSADGRGLASFQSRGMTTWELPGGYGRVKPDLVAVGQHVLGPback to top mRNA from alignment at E-fasciculatus_F_contig14328:1039..3090- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14328.3153.1 ID=mRNA_E-fasciculatus_F_contig14328.3153.1|Name=mRNA_E-fasciculatus_F_contig14328.3153.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2052bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14328:1039..3090- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14328:1039..3090- >mRNA_E-fasciculatus_F_contig14328.3153.1 ID=mRNA_E-fasciculatus_F_contig14328.3153.1|Name=mRNA_E-fasciculatus_F_contig14328.3153.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=528bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14328:1039..3090- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |