mRNA_E-fasciculatus_F_contig14325.3150.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14325.3150.1 vs. uniprot
Match: D7FZF2_ECTSI (Autophagy-related protein 9 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZF2_ECTSI) HSP 1 Score: 493 bits (1268), Expect = 5.700e-164 Identity = 320/363 (88.15%), Postives = 320/363 (88.15%), Query Frame = 1
Query: 4 KVATHTHYMPEHWRGKAHTVEVRAELLGLFRYKAQLFLEELLAVLFAPVILCLSMPSCAQEIVEFVTEHTVEVPGVGSVCSYSVFDFGRYGDEDYAAPSAASMAEVGPAERARRRRPDTTAQGKMEKSFLNFRQVTHYPDWQPGPAGQEMIDRLAGFQLQCLRKDAEAAXXXXXXXXXXXXXXXXXXXXXXX---AAHWGQSHLHQERQPGGVPMAVGKGPAGXXXXXXXXXXXXXSGASVLGHLDRDEEVGPDGGA--NLGPLAGGXXXXGRVSSPTGAVPSSLQLGLLNSVSPSMLLGPGAGAWLGGG-GTXXXXXXXXXXXXXXXXGVFGASMATPSFVQTSQLAPFLLSQIGGAHGGSF 1074
KVA HTHYMPEHW GKAHTV VRAELLGLF YKAQLFLEELLAVLFAPVILC SMPSCAQEIVEFVTEHTVEVPGVGSVCSYSVFDFGRYGDEDYAAPSAASMAEVGPAERARRRRPDTTAQGKMEKSFLNFR HYPDWQPGPAGQEMIDRLAGFQLQCLRKDAEAA XXXXXXXXXXXXXXXXXX AHWGQSHLHQERQP GV XXXXXXXXXXXX GASVLGHLDRDEEVGPDGG NLGP AGG GR SSPTGAVPSSLQLGLLNSVSPSMLLGPGAGAWLGGG XXXXXXXXXXXXXXXXGVFGASMATPSFVQTSQLAPFLLSQIGG HGGSF
Sbjct: 435 KVAAHTHYMPEHWLGKAHTVVVRAELLGLFHYKAQLFLEELLAVLFAPVILCFSMPSCAQEIVEFVTEHTVEVPGVGSVCSYSVFDFGRYGDEDYAAPSAASMAEVGPAERARRRRPDTTAQGKMEKSFLNFR--AHYPDWQPGPAGQEMIDRLAGFQLQCLRKDAEAAAAANTXXXXXXXXXXXXXXXXXXXAGGAHWGQSHLHQERQPVGVXXXXXXXXXXXXXXXXXXXXXXTPGASVLGHLDRDEEVGPDGGVTVNLGPFAGGG---GRASSPTGAVPSSLQLGLLNSVSPSMLLGPGAGAWLGGGTXXXXXXXXXXXXXXXXXXGVFGASMATPSFVQTSQLAPFLLSQIGGPHGGSF 792
BLAST of mRNA_E-fasciculatus_F_contig14325.3150.1 vs. uniprot
Match: A0A6H5K9U8_9PHAE (Autophagy-related protein 9 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9U8_9PHAE) HSP 1 Score: 400 bits (1028), Expect = 9.160e-130 Identity = 285/408 (69.85%), Postives = 289/408 (70.83%), Query Frame = 1
Query: 106 QLFLEELLAVLFAPVILCLSMPSCAQEIVEFVTEHTVEVPGVGSVCSYSVFDFGRYGDEDYAAPSAASMAEVGPAERARRRRPDTTAQGKMEKSFLNFRQVTHYPDWQPGPAGQEMIDRLAGFQLQCLRKDAEAAXXXXXXXXXXXXXXXXXXXXXXX---AAHWGQSHLHQERQPGGVPMAVGKGPAGXXXXXXXXXXXXXSGASVLGHLDRDEEVGPDGG----------------------------------------------------------------------------------ANLGPLAGGXXXXGRVSSPTGAVPSSLQLGLLNSVSPSMLLGPGAGAWLGGGGTXXXXXXXXXXXXXXXXGVFGASMATPSFVQTSQLAPFLLSQIGGAHGGSF 1074
++ L+ELLAVLFAPVILC SMPSCAQEIVEFVTEHTVEVPGVGSVCSYSVFDFGRYGDEDYAAPSAASMAEVGPAERARRRRPDTTAQGKMEKSFLNFR VTHYPDWQPGPAGQEMIDRLAGFQLQCLRKDAEAA XXXXXXXXXXXXXXXXXXX A WGQSHLHQ QP GV + G XXXXXXXXXXXX GASVLGHLDRDEEVGPDGG ANLGPLAGG GR SPTGAVPSSLQLGLLNSVSPSMLLGPGAGAWLGGG XXXXXXXXXXXXXGVFGASMATPSFVQTSQLAPFLLSQIGG HGGSF
Sbjct: 422 EVMLKELLAVLFAPVILCFSMPSCAQEIVEFVTEHTVEVPGVGSVCSYSVFDFGRYGDEDYAAPSAASMAEVGPAERARRRRPDTTAQGKMEKSFLNFRHVTHYPDWQPGPAGQEMIDRLAGFQLQCLRKDAEAAAAANXXXXXXXXXXXXXXXXXXXXXGGAQWGQSHLHQNHQPVGVCVGQGXXXXXXXXXXXXXXXXXTPGASVLGHLDRDEEVGPDGGVTAPEHGRDGXXXXXXSNXXXXXXXXXXXXXXXXXXXGXXXXXXPCEGEVGXXXXXXXXXXXXXXXXXXXXXXXXXXGRADQANLGPLAGGG---GRAPSPTGAVPSSLQLGLLNSVSPSMLLGPGAGAWLGGG----TXXXXXXXXXXXXXGVFGASMATPSFVQTSQLAPFLLSQIGGPHGGSF 822
BLAST of mRNA_E-fasciculatus_F_contig14325.3150.1 vs. uniprot
Match: A0A7S2STW1_9STRA (Autophagy-related protein 9 (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STW1_9STRA) HSP 1 Score: 144 bits (364), Expect = 1.080e-35 Identity = 75/166 (45.18%), Postives = 99/166 (59.64%), Query Frame = 1
Query: 1 QKVATHTHYMPEHWRGKAHTVEVRAELLGLFRYKAQLFLEELLAVLFAPVILCLSMPSCAQEIVEFVTEHTVEVPGVGSVCSYSVFDFGRYGDEDYAAPSAASMAEVGPAERARRRRPDTTAQGKMEKSFLNFRQVTHYPDWQPGPAGQEMIDRLAGFQLQCLRKD 498
+ V HTH+ PE WR T+ VR E L +F+YKAQLF EE+L VL AP +LC +MP A I+ F+ +HTV +G+VC YS+FDF +YGDE Y AP+ + E T QGK+EKSFLNF+ ++P+W G G + I+RL FQ L D
Sbjct: 198 EAVKEHTHFFPETWRRLCGTLRVRDEFLSMFKYKAQLFFEEILVVLAAPYVLCYAMPQAADRILAFIRDHTVHKDTIGAVCGYSLFDFRKYGDERYGAPNVRTDGEE-------------TEQGKLEKSFLNFK--INHPEWDCGEEGNQFINRLVNFQEDHLHHD 348
BLAST of mRNA_E-fasciculatus_F_contig14325.3150.1 vs. uniprot
Match: A0A7S2D6I8_9STRA (Autophagy-related protein 9 (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D6I8_9STRA) HSP 1 Score: 135 bits (339), Expect = 7.440e-35 Identity = 68/143 (47.55%), Postives = 92/143 (64.34%), Query Frame = 1
Query: 67 VRAELLGLFRYKAQLFLEELLAVLFAPVILCLSMPSCAQEIVEFVTEHTVEVPGVGSVCSYSVFDFGRYGDEDYAAPSAASMAEVGPAERARRRRPDTTAQGKMEKSFLNFRQVTHYPDWQPGPAGQEMIDRLAGFQLQCLRK 495
VR + +F++K QLF +E+L VL AP +LC+SMP+ A++++ F+ EHTV+V G+GSVC YS+FDFGRYGDE YAAP S + T QGKMEKSFLNF+ ++PDW G G I ++ FQ Q L +
Sbjct: 1 VRDQFFSIFKFKVQLFCDEILVVLLAPFVLCVSMPAAAEDMLRFIREHTVDVEGIGSVCGYSLFDFGRYGDERYAAPKDGSEVD------------GRTEQGKMEKSFLNFK--INHPDWDCGEQGNTFIAKICAFQEQQLEE 129
BLAST of mRNA_E-fasciculatus_F_contig14325.3150.1 vs. uniprot
Match: A0A2P6V2C1_9CHLO (Autophagy-related 9 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V2C1_9CHLO) HSP 1 Score: 143 bits (360), Expect = 7.320e-34 Identity = 74/156 (47.44%), Postives = 97/156 (62.18%), Query Frame = 1
Query: 4 KVATHTHYMPEHWRGKAHTVEVRAELLGLFRYKAQLFLEELLAVLFAPVILCLSMPSCAQEIVEFVTEHTVEVPGVGSVCSYSVFDFGRYGDEDYAAPSAASMAEVGPAERARRRRPDTTAQGKMEKSFLNFRQVTHYPDWQPGPAGQEMIDRLAG 471
+V HTHY+P HWRG+AHT EV+ + LF+YKA LF EEL ++L P++L S+P CA ++ FV EHTV V GVG VCS + FDF R+G+ Y AP+AA + QGKMEKSFL+F Y W+P AGQ ++ +LAG
Sbjct: 528 EVVAHTHYLPRHWRGRAHTREVQGQFQALFQYKALLFWEELSSILLTPLLLWFSLPQCAGAVLAFVEEHTVHVEGVGDVCSLAAFDFQRHGNARYGAPAAAPKLL-------------RSRQGKMEKSFLSF--AATYTGWEPDAAGQALLQQLAG 668
BLAST of mRNA_E-fasciculatus_F_contig14325.3150.1 vs. uniprot
Match: A0A7J7PN86_9CHLO (Autophagy-related protein 9 n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PN86_9CHLO) HSP 1 Score: 141 bits (356), Expect = 2.080e-33 Identity = 76/154 (49.35%), Postives = 99/154 (64.29%), Query Frame = 1
Query: 4 KVATHTHYMPEHWRGKAHTVEVRAELLGLFRYKAQLFLEELLAVLFAPVILCLSMPSCAQEIVEFVTEHTVEVPGVGSVCSYSVFDFGRYGDEDYAAPSAASMAEVGPAERARRRRPDTTAQGKMEKSFLNFRQVTHYPDWQPGPAGQEMIDRL 465
+V HTH++P HWRG+AH+ EV+ L +F +K LFLEEL +VL P IL S+P CA I++FV E T V GVG VCS +VFDFGR+G+ Y AP+ A PA+R R + QGKMEKSFL F V YP W+P AG++M+ +
Sbjct: 475 EVVLHTHHLPRHWRGRAHSAEVQQSLNSMFSFKLLLFLEELASVLLTPFILAYSLPRCAGAILQFVAETTTRVEGVGDVCSLAVFDFGRHGNSKYGAPAHA------PAKRLR------SKQGKMEKSFLTF--VATYPTWRPPAAGRQMLTNI 614
BLAST of mRNA_E-fasciculatus_F_contig14325.3150.1 vs. uniprot
Match: A0A7S3XM97_HETAK (Autophagy-related protein 9 (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XM97_HETAK) HSP 1 Score: 131 bits (329), Expect = 4.750e-33 Identity = 69/169 (40.83%), Postives = 103/169 (60.95%), Query Frame = 1
Query: 1 QKVATHTHYMPEHWRGKAHTVEVRAELLGLFRYKAQLFLEELLAVLFAPVILCLSMPSCAQEIVEFVTEHTVEVPGVGSVCSYSVFDFGRYGDEDYAAPSAASMAEVGPAERARRRRPDTTAQGKMEKSFLNFRQVTHYPDWQPGPAGQEMIDRLAGFQLQCLRKDAEA 507
+K A THY P W G+AH VR E+ LF KA L EL ++LFAP+IL +S+P CAQ +V+F+ T E G+G+VC+Y +F+F ++GD YAAP+A G + +GK+EKSF++F+ + +PDW G AG+ ++ +A FQ + L+ A+A
Sbjct: 12 RKAAAATHYFPARWAGRAHAPAVRREVARLFPPKAALLGTELASLLFAPLILGVSLPRCAQRVVDFIESRTAETEGLGAVCAYGLFEFDKHGDPAYAAPAARGGGARG----------EGCREGKLEKSFVSFQAM--HPDWDAGAAGRSLLGAVARFQQRSLQAQAQA 168
BLAST of mRNA_E-fasciculatus_F_contig14325.3150.1 vs. uniprot
Match: A0A383WCE8_TETOB (Autophagy-related protein 9 n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WCE8_TETOB) HSP 1 Score: 139 bits (351), Expect = 1.060e-32 Identity = 74/154 (48.05%), Postives = 99/154 (64.29%), Query Frame = 1
Query: 4 KVATHTHYMPEHWRGKAHTVEVRAELLGLFRYKAQLFLEELLAVLFAPVILCLSMPSCAQEIVEFVTEHTVEVPGVGSVCSYSVFDFGRYGDEDYAAPSAASMAEVGPAERARRRRPDTTAQGKMEKSFLNFRQVTHYPDWQPGPAGQEMIDRL 465
++ HTH++P HWRG+AH+ EV+ + +F +K LFLEEL +VL P IL S+P CA I++FV + T V GVG VCS +VFDFGR+G+ Y AP+ A PA+R R + QGKMEKSFL F V YP WQP AG++M+ +
Sbjct: 437 QLVLHTHHLPRHWRGRAHSAEVQQAVSSMFGFKLALFLEELASVLLTPFILAYSLPRCAGAILQFVADTTTRVEGVGDVCSLAVFDFGRHGNSKYGAPAHA------PAKRLR------SKQGKMEKSFLTF--VATYPTWQPPAAGRQMLHNI 576
BLAST of mRNA_E-fasciculatus_F_contig14325.3150.1 vs. uniprot
Match: A0A2V0PIS9_9CHLO (Autophagy-related protein 9 n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PIS9_9CHLO) HSP 1 Score: 139 bits (349), Expect = 1.850e-32 Identity = 75/155 (48.39%), Postives = 97/155 (62.58%), Query Frame = 1
Query: 4 KVATHTHYMPEHWRGKAHTVEVRAELLGLFRYKAQLFLEELLAVLFAPVILCLSMPSCAQEIVEFVTEHTVEVPGVGSVCSYSVFDFGRYGDEDYAAPSAASMAEVGPAERARRRRPDTTAQGKMEKSFLNFRQVTHYPDWQPGPAGQEMIDRLA 468
++ HTH++P HWRG+AHT EV+ + GLF+ K LF EEL +VLF P IL S+P CA I+ FV EHT V GVG VC+ + FDF R+G+ Y AP AA P++ AR + QGKMEKSFL F V YP W P P G+ ++ L+
Sbjct: 441 ELVAHTHHLPRHWRGRAHTAEVQEAVAGLFQLKLLLFAEELASVLFTPFILGCSLPKCAGAILAFVREHTTRVEGVGDVCTLAAFDFDRHGNPKYGAPCAA------PSKAAR------SKQGKMEKSFLTF--VATYPTWAPPPGGRALLAALS 581
BLAST of mRNA_E-fasciculatus_F_contig14325.3150.1 vs. uniprot
Match: A0A8J4AJ15_9CHLO (Uncharacterized protein n=2 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4AJ15_9CHLO) HSP 1 Score: 138 bits (347), Expect = 3.970e-32 Identity = 71/154 (46.10%), Postives = 95/154 (61.69%), Query Frame = 1
Query: 7 VATHTHYMPEHWRGKAHTVEVRAELLGLFRYKAQLFLEELLAVLFAPVILCLSMPSCAQEIVEFVTEHTVEVPGVGSVCSYSVFDFGRYGDEDYAAPSAASMAEVGPAERARRRRPDTTAQGKMEKSFLNFRQVTHYPDWQPGPAGQEMIDRLA 468
V T THY+P+ WRG+AHT EV+ L LFR K LF+EEL +++ P++L S+P+CA+ IVEFV+ T V GVG VCS ++FD R+GD +Y AP A + QGK+EKSFL F V YP W+PG G+ M++ LA
Sbjct: 473 VVTFTHYLPQRWRGRAHTAEVQGAFLSLFRLKVVLFMEELASLVTTPLVLACSLPACAESIVEFVSTFTAHVDGVGDVCSMAMFDLVRHGDTNYGAPVQAEETF-------------RSCQGKLEKSFLTF--VATYPTWEPGDVGRRMLEALA 611 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14325.3150.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14325.3150.1 >prot_E-fasciculatus_F_contig14325.3150.1 ID=prot_E-fasciculatus_F_contig14325.3150.1|Name=mRNA_E-fasciculatus_F_contig14325.3150.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=349bp MPEHWRGKAHTVEVRAELLGLFRYKAQLFLEELLAVLFAPVILCLSMPSCback to top mRNA from alignment at E-fasciculatus_F_contig14325:9..2774+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14325.3150.1 ID=mRNA_E-fasciculatus_F_contig14325.3150.1|Name=mRNA_E-fasciculatus_F_contig14325.3150.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2766bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14325:9..2774+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14325:9..2774+ >mRNA_E-fasciculatus_F_contig14325.3150.1 ID=mRNA_E-fasciculatus_F_contig14325.3150.1|Name=mRNA_E-fasciculatus_F_contig14325.3150.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2094bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14325:9..2774+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |