prot_E-fasciculatus_F_contig14300.3143.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14300.3143.1
Unique Nameprot_E-fasciculatus_F_contig14300.3143.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length1028
Homology
BLAST of mRNA_E-fasciculatus_F_contig14300.3143.1 vs. uniprot
Match: A0A6H5JS66_9PHAE (RWP-RK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS66_9PHAE)

HSP 1 Score: 1305 bits (3378), Expect = 0.000e+0
Identity = 860/1093 (78.68%), Postives = 882/1093 (80.70%), Query Frame = 0
Query:    1 RYCKALEDAEKKKQLITRGAAAGVDPNVRNALYLADTANVSEDDIFGNPELMSKLSDALKTITKRKRVKGKPLVDLIATVQRDGSLPACVQASNGTAPQPPSARGTTLKPVAKTGADAAXXXXXXXXXXXXXXXXXXXXXXXX-------RQIRPPAIVDAIATSNEEYAANIEHAYGSVHRPESSTSDTTSVSPALSSLGNSAHGSSVEDYAHHGWGHNSSNGDXXXXXXXXXXXXXXXXXXXXXXXQYGARSQGSTPVSASVEASRRARANGEGFSHDA----PASSCATLVAGSSPGPGERAFSPAGGSMSGRYSPAAGGGVNGAAGAATGVVLQQPPSFAFRPTGAAGTPSGGXXXXXXXXXXXXXXXXXXXXXXXXXKERLSITSSVASTDIESLDTSHLLEFDDDDDDEAVPYGGPGYAAPAGDLGCVPSAA----SGGXXXXXXXXXGNRVSPEDLQELEEALLMDNFSGVMDGILEGEEIPSAVPKMEGLENMSFSGLFNGGAQPLPRAGGHATSSGPGI---VPRGTPRSAGAAGSPRVQMFGGRSGASPNHAAGSASP---------------------------------NNSPRVGSSPRPPTXXXXXTHATAPGGG--------SGSGRRRGDEAFPAEHYALPSPKDPLGSNGLMGGPSPKSRRVGARGFPERFPGSPQAGLSPHVGFPPQSPLSGGGAAAGSXXAGSAGFNVTCSPLGGSDRTYFPAPAASAKAAALGDPSSGRGHRRSSSSGLSSGWGSGPRHGGVGEGGFDPCATAPSGPSXXXXXXXXXXXXXXXXXAMSAGFQASATAASSSGQSWSVRLGDGAKQSGVATAPKPVPRQHGWVLSSGEVQQQXXXXTKSRSSSPSISANGQPQQRLPQQQSAASRPKSHGVVRRRHSAPIPPVQTFPVASGAGEFAGEDIMGMSSVACSSAIKMEFQAAAGTRQPMEGIG-GGSXXXXXXXGDVLESFSTNFFGAATGAXXXXXXXXX----GKWGGAAPAPVVTKM-ETEGAWWQ-RQAGEGGMLLETSATAASTPATEMPGNGEFETTFDDSAGGDDLMDAHVMTATLPVDL 1027
            RYCKALEDAEKKKQLITRGAAAGVDPNVRNALYLADTANVSEDDIFGNPELMSKLSDALKTITKRKRVKGKP  DLIATVQRDGSLPACVQASNGTAPQPPS R T +K VAKTGA A XXXXXXXXXXXXXXXXXXXXXXXX       RQIRPPAIVDAIATSNEEYAA IEHAYGSV  PESS SDTTSVSPALSSLGNSAHGSS EDYAHHGWGHNSS                           YGAR                  A GEGFSHDA    PASS ATLVAGSSPGPGERA SP GGS+SGRYSPAA       A A T VVLQQ P FA RPTG AGTPSGG  XXXXXXXXXXXXXXXXXXX    KERLSITSSVASTDIESLDTSH L+FDDDDDDEAVPYGGPGYAAPAGDLGCVPSAA    SG XXXXXXX  GNRVSPEDLQELEEALLMDNFSGV+DGI EGEEIPSAVPKMEGLE ++FSGLFN GAQPL RAGGHA +SGPGI   VPRGTPRSAGA GSPRVQMFGGRSGASPNHAAGSA+                                  NNSPRVGSSPRPPTX XX THATAPGG         S SGRRRGDEAFPAEHYALPSPKDPLGSNGLMGGPSPKSRRVGARGFPERFPGSPQAGLSPHVGFPPQSPLSGGGAAAG+   GS GFNVTCSPLGGSDRTYFPAPAASAKAAAL DPSSGRGHRRSSSSGLSSGW SGPRHGGV E GFD CATAPSGPSXXXXXXXXXXXXX    AMSAGFQASATAASSSGQSWS+RLGDG KQ+GV TAPKP  R +GWVLSSGEVQQQ    TKSR+ SPSISANG PQQRLP+QQSA+SRPKSHGVV+RRHSAPIPP+ TFP ASGAGEFAGEDIMGMSS AC SAIKMEFQA AG+RQP+EGIG GGS XXX   GDV+ESFSTN+FGAATG XXXXXXXXX    GK GG APAP  TKM E EGAWWQ RQAGEGGMLLETSA  A  PATE+  N EFETTFDDSAG DDLMDAHVMT TLPVDL
Sbjct:  100 RYCKALEDAEKKKQLITRGAAAGVDPNVRNALYLADTANVSEDDIFGNPELMSKLSDALKTITKRKRVKGKPFGDLIATVQRDGSLPACVQASNGTAPQPPSVRATAIKLVAKTGAAAXXXXXXXXXXXXXXXXXXXXXXXXXGCGGASRRQIRPPAIVDAIATSNEEYAAIIEHAYGSVQHPESSASDTTSVSPALSSLGNSAHGSSAEDYAHHGWGHNSSTSSTT----------------------YGAR------------------AKGEGFSHDALLDSPASSDATLVAGSSPGPGERALSPGGGSLSGRYSPAA-------AAAVTSVVLQQSPPFALRPTGLAGTPSGGGAXXXXXXXXXXXXXXXXXXXRP--KERLSITSSVASTDIESLDTSHFLDFDDDDDDEAVPYGGPGYAAPAGDLGCVPSAAGGVGSGXXXXXXXXGAGNRVSPEDLQELEEALLMDNFSGVIDGIQEGEEIPSAVPKMEGLERVNFSGLFNSGAQPLTRAGGHAANSGPGIGAGVPRGTPRSAGATGSPRVQMFGGRSGASPNHAAGSATAGXRRRWRPASAGAPWNGPAAEQPGPPAPLHARQNNSPRVGSSPRPPTXGXXGTHATAPGGXXXXXXXXXSLSGRRRGDEAFPAEHYALPSPKDPLGSNGLMGGPSPKSRRVGARGFPERFPGSPQAGLSPHVGFPPQSPLSGGGAAAGAG--GSTGFNVTCSPLGGSDRTYFPAPAASAKAAALADPSSGRGHRRSSSSGLSSGWASGPRHGGVAESGFDRCATAPSGPSXXXXXXXXXXXXX----AMSAGFQASATAASSSGQSWSMRLGDGTKQNGVTTAPKPAHRHNGWVLSSGEVQQQQQQGTKSRNYSPSISANGPPQQRLPRQQSASSRPKSHGVVQRRHSAPIPPLHTFPAASGAGEFAGEDIMGMSSAACCSAIKMEFQAPAGSRQPLEGIGAGGSGXXXGCGGDVVESFSTNYFGAATGXXXXXXXXXXXXXXGKLGGVAPAPATTKMGEAEGAWWQQRQAGEGGMLLETSAMPAPAPATEISSNCEFETTFDDSAGCDDLMDAHVMTTTLPVDL 1137          
BLAST of mRNA_E-fasciculatus_F_contig14300.3143.1 vs. uniprot
Match: D8LTZ5_ECTSI (Putative NIN-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTZ5_ECTSI)

HSP 1 Score: 1182 bits (3059), Expect = 0.000e+0
Identity = 774/1051 (73.64%), Postives = 788/1051 (74.98%), Query Frame = 0
Query:    1 RYCKALEDAEKKKQLITRGAAAGVDPNVRNALYLADTANVSEDDIFGNPELMSKLSDALKTITKRKRVKGKPLVDLIATVQRDGSLPACVQASNGTAPQPPSARGTTLKPVAKTGADAAXXXXXXXXXXXXXXXXXXXXXXXXRQIRPPAIVDAIATSNEEYAANIEHAYGSVHRPESSTSDTTSVSPALSSLGNSAHGSSVEDYAHHGWGHNSSNGDXXXXXXXXXXXXXXXXXXXXXXXQYGARSQGSTPVSASVEASR-RARANGEGFSHDA----PASSCATLVAGSSPGPGERAFSPAGGSMSGRYSPAAGGG---VNGAAGAAT---GVVLQQPPSFAFRPTGAAGTPSGGXXXXXXXXXXXXXXXXXXXXXXXXXKERLSITSSVASTDIESLDTSHLLEFDDDDDDEAVPYGGPGYAAPAGDLGCVPSAA----SGGXXXXXXXXXGNRVSPEDLQELEEALLMDNFSGVMDGILEGEEIPSAVPKMEGLENMSFSGLFNGGAQPLPRAGGHATSSGPGI---VPRGTPRSAGAAGSPRVQMFGGRSGASPNHAAGSASPNNSPRVGSSPRPPTXXXXXTHATAPGGGS--GSGRRRGDEAFPAEHYALPSPKDPLGSNGLMGGPSPKSRRVGARGFPERFPGSPQAGLSPHVGFPPQSPLSGGGAAAGSXXAGSAGFNVTCSPLGGSDRTYFPAPAASAKAAALGDPSSGRGHRRSSSSGLSSGWGSGPRHGGVGEGGFDPCATAPSGPSXXXXXXXXXXXXXXXXXAMSAGFQASATAASSSGQSWSVRLGDGAKQSGVATAPKPVPRQHGWVLSSGEVQQQXXXXTKSRSS--SPSISANGQPQQRLPQQQSAASRPKSHGVVRRRHSAPIPPVQTFPVASGAGEFAGEDIMGMSSVACSSAIKMEFQAAAGTRQPMEGIGGGSXXXXXXXGDVLESFSTNFFGAATGAXXXXXXXXXGKWGGAAPAPVVTKM-ETEGAWWQ-RQAGEGGMLLETSATAASTPATEMPGNGEFETTFDDSAGGDDLMDAHVMTATLPVDL 1027
            RYCKALEDAEKKKQLITRGAAAGVDPNVRNALYLADTANVSEDDIFGNPELMSKLSDALKTITKRKRVKGKPLVDLIATVQRDGSLPACVQ                                                                                                                                                             GSTPVSASVEASR RARANGEGFSHDA    PASSCATLVAGSSPGPGE  FSP GGS+SGRYSPAA GG   VNG A AAT   GVVLQQPPSFAFRP+GAAGTPSGGXXXXXXXXXXXXXXXXXXXXX    KERLSITSSVASTDIESLDTSHLLEFDDDDDDEAVPYGGPGYAAPAGDLGCVPSAA    SG  XXXXXX  GNRVSPEDLQELEEALLMDNFSG+MDGILEGEEIPS VPKMEGLENM+FSGLFN GAQPL R GGHA +SGPGI   VPRGTPRSAGAAGSPRVQMFGGRS  SPNHAAGSASP  + R G SP P T     T ATAPGGGS  GSGRRRGDEAFPAE YALPSPKDPLGSNGLMGGPSPKSRRVGARGFPERFPGSPQAGLSPHVGF PQSPLSGGGAAAG+   GSAGFNVTCSPLGGSDRTYFPAPAASAKAAAL DPSSGRGHRRSSSSGLSSGWGSG RHGGVGE GFDPCATAPSGPS    XXXXXXXX     AMSAGFQASATAASSSGQ+WSVRLGDG KQ+GVATAPKP PRQHGWVLSSGEVQQ XXXX        SPSISANG PQQRLPQQQSAASRPK+HGVVRRRHSAPIPPVQ FPVASGAGEFAGEDIM MSS ACSSAIKMEFQA AG+RQP+EGIGGGS       GDVLESFSTN+FGAATGAXXXXXXXXXGKW G APAP  TKM E EG WWQ RQAGEGGMLLETSATAA  P+TEMPGN EFETTFDDSAG DDLMDAHVMTATLPVDL
Sbjct:  100 RYCKALEDAEKKKQLITRGAAAGVDPNVRNALYLADTANVSEDDIFGNPELMSKLSDALKTITKRKRVKGKPLVDLIATVQRDGSLPACVQ-------------------------------------------------------------------------------------------------------------------------------------------------------------GSTPVSASVEASRARARANGEGFSHDALLDSPASSCATLVAGSSPGPGEGPFSPGGGSLSGRYSPAAAGGGSGVNGTAAAATRATGVVLQQPPSFAFRPSGAAGTPSGGXXXXXXXXXXXXXXXXXXXXXRP--KERLSITSSVASTDIESLDTSHLLEFDDDDDDEAVPYGGPGYAAPAGDLGCVPSAAGGVGSGPGXXXXXXGAGNRVSPEDLQELEEALLMDNFSGLMDGILEGEEIPSGVPKMEGLENMNFSGLFNSGAQPLTRTGGHAANSGPGIGAGVPRGTPRSAGAAGSPRVQMFGGRSVPSPNHAAGSASPVGT-RKGYSPPPQTPGTPGTQATAPGGGSXSGSGRRRGDEAFPAEQYALPSPKDPLGSNGLMGGPSPKSRRVGARGFPERFPGSPQAGLSPHVGFLPQSPLSGGGAAAGAN--GSAGFNVTCSPLGGSDRTYFPAPAASAKAAALADPSSGRGHRRSSSSGLSSGWGSGHRHGGVGESGFDPCATAPSGPSAAAVXXXXXXXXG----AMSAGFQASATAASSSGQNWSVRLGDGTKQNGVATAPKPAPRQHGWVLSSGEVQQXXXXXXXXXXXXXSPSISANGPPQQRLPQQQSAASRPKTHGVVRRRHSAPIPPVQIFPVASGAGEFAGEDIMDMSSAACSSAIKMEFQAGAGSRQPLEGIGGGSGGG----GDVLESFSTNYFGAATGAXXXXXXXXXGKWRGGAPAPAATKMGEAEGVWWQHRQAGEGGMLLETSATAARAPSTEMPGNCEFETTFDDSAGCDDLMDAHVMTATLPVDL 980          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14300.3143.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JS66_9PHAE0.000e+078.68RWP-RK domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LTZ5_ECTSI0.000e+073.64Putative NIN-like transcription factor n=1 Tax=Ect... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 216..236

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14300contigE-fasciculatus_F_contig14300:105..3332 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14300.3143.1mRNA_E-fasciculatus_F_contig14300.3143.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14300 105..3332 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14300.3143.1 ID=prot_E-fasciculatus_F_contig14300.3143.1|Name=mRNA_E-fasciculatus_F_contig14300.3143.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=1028bp
RYCKALEDAEKKKQLITRGAAAGVDPNVRNALYLADTANVSEDDIFGNPE
LMSKLSDALKTITKRKRVKGKPLVDLIATVQRDGSLPACVQASNGTAPQP
PSARGTTLKPVAKTGADAAAAAAASGSSSSSNSARSSGGGASRRQIRPPA
IVDAIATSNEEYAANIEHAYGSVHRPESSTSDTTSVSPALSSLGNSAHGS
SVEDYAHHGWGHNSSNGDSQQQLQQHQQQQQQQQQQHHHHHQYGARSQGS
TPVSASVEASRRARANGEGFSHDAPASSCATLVAGSSPGPGERAFSPAGG
SMSGRYSPAAGGGVNGAAGAATGVVLQQPPSFAFRPTGAAGTPSGGGGAG
YPHGMGQRQPSPAGGGRRPRPKERLSITSSVASTDIESLDTSHLLEFDDD
DDDEAVPYGGPGYAAPAGDLGCVPSAASGGVGSGAAGGAGNRVSPEDLQE
LEEALLMDNFSGVMDGILEGEEIPSAVPKMEGLENMSFSGLFNGGAQPLP
RAGGHATSSGPGIVPRGTPRSAGAAGSPRVQMFGGRSGASPNHAAGSASP
NNSPRVGSSPRPPTPGTPGTHATAPGGGSGSGRRRGDEAFPAEHYALPSP
KDPLGSNGLMGGPSPKSRRVGARGFPERFPGSPQAGLSPHVGFPPQSPLS
GGGAAAGSAAAGSAGFNVTCSPLGGSDRTYFPAPAASAKAAALGDPSSGR
GHRRSSSSGLSSGWGSGPRHGGVGEGGFDPCATAPSGPSAAAAAAVAAAA
AAGSSGAMSAGFQASATAASSSGQSWSVRLGDGAKQSGVATAPKPVPRQH
GWVLSSGEVQQQQQQVTKSRSSSPSISANGQPQQRLPQQQSAASRPKSHG
VVRRRHSAPIPPVQTFPVASGAGEFAGEDIMGMSSVACSSAIKMEFQAAA
GTRQPMEGIGGGSGGGSSGGGDVLESFSTNFFGAATGAGAGAGAAAAGKW
GGAAPAPVVTKMETEGAWWQRQAGEGGMLLETSATAASTPATEMPGNGEF
ETTFDDSAGGDDLMDAHVMTATLPVDL*
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