mRNA_E-fasciculatus_F_contig143.3136.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig143.3136.1 vs. uniprot
Match: D8LTF3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTF3_ECTSI) HSP 1 Score: 1254 bits (3245), Expect = 0.000e+0 Identity = 660/843 (78.29%), Postives = 698/843 (82.80%), Query Frame = 3
Query: 519 LSWVMPGDTPLSVDTSVPDGATSADYCCYGIFETTVTECGAGVEAPCRMPQEIETKVDTCGVDGIVGTAGTGNMCCPLGCAICAGTGCGDQHISYVFPGELPWSTTAPEGSETQDFCCLKAFRGVGECGVDGAEPPCLIPEVVETLAPRDLPDDNCGVDGIQGIRSGDNCCPLGCGQCGGTGCGSIDMGYITPYLDHEPAVGATSSSYCCSSSFTVDSPTCGDGVSPPCLISAENP--ETVTATLAPEVASTLMDTCGLPGMPGIMDTSGARCCPSGCGMCGGPGCGSIDMNLVAPTVEGDVPVDAKSGDYCCTSGVDIRDVTCGTGA--DEGYPPCLIPAGTVTVTATLAPEVASALMDTCGLPGMPGIIDATETRCCPQGCGLCGGPGCGTVDMNLVAPTVEGDVPTDAKSGTYCCTSGVDARDVTCGTGA--DEGHPPCLIPADLAEDTCYVEGVEGVSNDGVHCCPLGCGQCGGTGCGAIPEANIFPDGRDLPVDATASDYCCLSAFATIQAECGDLGVEPPCLIPAAGTSRPPAAAPVDTGDGSGSASGGGNDTDITDGPDRVVGGGFTPSPSAXXXXXXXXXXXXXXXXMETMGCMTISVIVDEHQQFDGIYNMMAGMNETIFLKNDSSAFMSHVPYEEASTNTTSXXXXXXXATSECGFWILAETMGGNSSVSVQDCATNPEDIDDTAMWMVEDTTEGTPGSAVEVMVECMDVPATPSPASTGSGG----SLPDGEEGDGVXXXXXXXXXXXXXXXXXXXXXXXXDGSTTLAPADGSTGGATDRSVNAGDAGDTEDDASSSSSKGGLSTGEAVGVGVACSVVAVVGAVGLTRWAKG 3017
+SWVMPGD PLSVD SVPDGATSADYCCY IFETT T CGAGVEAPCRMPQE ETKVDTCGVDGI G AG N CCPLGCA C G GCGDQHISYVFPGELPWSTTAPEGS TQDFCC AFR VGECGVDGAEPPC+IPEVVETL PRDLPDD CGV GIQG+R+GD CCPLGCGQCG TGCGSIDMGYITPYLDHEPA ATS+SYCC+SSFTV+SPTCGDGVSPPCLI+AE+ ETVTATLAPEVAS+L+D CGLP +PGIMDTSG RCCP GCGMCGG GCG +DMNLVAPTVEGDVP+DAKSGDYCCTSGVD RDVTCGTG DEGYPPC IPAGT TVTATLAPEV+S L+D CGLPG+PGI+DAT TRCCPQGCG+CGG GCG +DMNLVAPTVEGDVP DAKSG YCCTSGVD RDVTCGTG DEG+PPCLIPAD AEDTCYVEGVEGVS+DGV+CCPLGCGQCGG GCGAIP NIFPDGR+LP DATAS YCCL AF I+ CGD GVEPPC+IP GTSRPP AAPVDTGDG NDT ITDGPDRVVGGG TPSPSA METM C TISVIVDE QQFDGIY+MMAGMNET+FLKNDSSA MSHVPYE A+TNTTS ATSECG+WILAE G NSS++VQDCATNP+DID WMVE TTE TP AVEVMVEC+D+P+T SLPDGEEGDGV XXXXXXXXXXXXXXXXXXXXX AD STGGA DRSV+ GDA +TEDDA SSSSKGGLSTGEAVGVGVACSVVAVVGAVGLTRWAKG
Sbjct: 1 MSWVMPGDNPLSVDPSVPDGATSADYCCYDIFETTETVCGAGVEAPCRMPQEFETKVDTCGVDGIEGLAGPANTCCPLGCANCVGIGCGDQHISYVFPGELPWSTTAPEGSATQDFCCQSAFRDVGECGVDGAEPPCMIPEVVETLPPRDLPDDTCGVVGIQGVRTGDKCCPLGCGQCGDTGCGSIDMGYITPYLDHEPASNATSTSYCCTSSFTVNSPTCGDGVSPPCLIAAEDQVTETVTATLAPEVASSLIDNCGLPDIPGIMDTSGTRCCPQGCGMCGGVGCGLVDMNLVAPTVEGDVPIDAKSGDYCCTSGVDTRDVTCGTGTGDDEGYPPCFIPAGTGTVTATLAPEVSSNLIDNCGLPGIPGIMDATGTRCCPQGCGMCGGGGCGLIDMNLVAPTVEGDVPIDAKSGDYCCTSGVDTRDVTCGTGTGDDEGYPPCLIPADFAEDTCYVEGVEGVSDDGVYCCPLGCGQCGGEGCGAIPVVNIFPDGRELPEDATASSYCCLKAFVDIEVVCGDPGVEPPCMIPE-GTSRPPVAAPVDTGDGXXXXXXXXNDTGITDGPDRVVGGGSTPSPSA----------------METMDCKTISVIVDELQQFDGIYHMMAGMNETLFLKNDSSAIMSHVPYEGAATNTTSTTTTALNATSECGYWILAEATG-NSSLTVQDCATNPDDIDTAMWWMVEGTTEATPEHAVEVMVECVDMPSTXXXXXXXXXXXXXXSLPDGEEGDGVGXXXXXXXXXXXXXXXXXXXXX-------XXXADDSTGGAQDRSVDPGDAANTEDDAPSSSSKGGLSTGEAVGVGVACSVVAVVGAVGLTRWAKG 818
BLAST of mRNA_E-fasciculatus_F_contig143.3136.1 vs. uniprot
Match: A0A6H5JLD2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLD2_9PHAE) HSP 1 Score: 790 bits (2040), Expect = 4.430e-276 Identity = 432/560 (77.14%), Postives = 461/560 (82.32%), Query Frame = 3
Query: 1350 MCGGPGCGSIDMNLVAPTVEGDVPVDAKSGDYCCTSGVDIRDVTCGTGA--DEGYPPCLIPAGTVTVTATLAPEVASALMDTCGLPGMPGIIDATETRCCPQGCGLCGGPGCGTVDMNLVAPTVEGDVPTDAKSGTYCCTSGVDARDVTCGTGA--DEGHPPCLIPADLAEDTCYVEGVEGVSNDGVHCCPLGCGQCGGTGCGAIPEANIFPDGRDLPVDATASDYCCLSAFATIQAECGDLGVEPPCLIPAAGTSRPPAAAPVDTGDGSGSASGGGNDTDITDGPDRVVGGGFTPSPSAXXXXXXXXXXXXXXXXMETMGCMTISVIVDEHQQFDGIYNMMAGMNETIFLKNDSSAFMSHVPYEEASTNTTSXXXXXXXATSECGFWILAETMGGNSSVSVQDCATNPEDIDDTAMWMVEDTTEGTPGSAVEVMVECMDVPATPSPASTGSGGSLPDGEEGDGVXXXXXXXXXXXXXXXXXXXXXXXXDGSTTLAPADGSTGGATDRSVNAGDAGDTEDDASSSSSKGGLSTGEAVGVGVACSVVAVVGAVGLTRWAKG 3017
MCGGPGCG +DMN+VAPTVEGDVP+DAKSGDYCCTSGVD RDVTCGTG DEGYPPC IP GTV TATLAPEVAS+L+D CGLP MPGI+DA+ TRCCPQGCG+CGGPGCG VDMN+VAPTVEGDVP DAKSG YCCTSGVD+RDVTCGTG DEG+PPC IP DLAEDTCYVEGVEGVS+DGV+CCPLGCGQCGG GCGAIP NIFPDGR+LP DATAS YCCL AF I+ CGD GVEPPC+IP GTSRPPAA PVDTGDGS SGGGNDTD+TDGPDRVVGGG TPSPSA METMGC TISVIVDE QQFDGIY+MMAGMNET+FLKNDSSAFMSHVPYE A TNTTS ATSECG+WILAE GGN S++VQDCATNP+DID WMVEDTTE TP AVEVMVEC+D+P+TPSPASTGSGG LPDGE XXXXXXXXXXXXXXXXXXXX AD +TGG DRSV+ GDA +TEDDA SSSSKGGLSTGEAVGVGVACSVVAVVGAVGLTRWAKG
Sbjct: 1 MCGGPGCGLVDMNVVAPTVEGDVPIDAKSGDYCCTSGVDSRDVTCGTGVGDDEGYPPCFIPVGTV--TATLAPEVASSLIDNCGLPDMPGIMDASGTRCCPQGCGMCGGPGCGLVDMNVVAPTVEGDVPIDAKSGDYCCTSGVDSRDVTCGTGTGDDEGYPPCFIPVDLAEDTCYVEGVEGVSDDGVYCCPLGCGQCGGVGCGAIPVVNIFPDGRELPEDATASSYCCLRAFVEIEVVCGDPGVEPPCVIPE-GTSRPPAAVPVDTGDGSEGGSGGGNDTDVTDGPDRVVGGGSTPSPSA----------------METMGCKTISVIVDEQQQFDGIYHMMAGMNETLFLKNDSSAFMSHVPYEGAVTNTTSTTTTALNATSECGYWILAEATGGNYSLTVQDCATNPDDIDTVIWWMVEDTTEATPELAVEVMVECVDMPSTPSPASTGSGGPLPDGEX--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXADDTTGGIQDRSVDPGDADNTEDDAPSSSSKGGLSTGEAVGVGVACSVVAVVGAVGLTRWAKG 533
BLAST of mRNA_E-fasciculatus_F_contig143.3136.1 vs. uniprot
Match: A0A6H5JG71_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG71_9PHAE) HSP 1 Score: 143 bits (360), Expect = 4.200e-36 Identity = 70/95 (73.68%), Postives = 75/95 (78.95%), Query Frame = 3
Query: 183 ACE--DPSQVATCNGIQGTGKNADICCASECVCTCGGASTENTGKECFLGQIRETPPDWCTGEEDATKACALPPTDPVDATPCGVTDGVLSDDGF 461
ACE +PSQVATCNGIQGTGKNADICCASECVCTCGG S EN GKECFL +IR TPPDWCTGEEDA++ACALPPT T G TD L + F
Sbjct: 33 ACEVPEPSQVATCNGIQGTGKNADICCASECVCTCGGTSAENIGKECFLTEIRATPPDWCTGEEDASEACALPPTGIRTITHAGFTDRPLELNRF 127
BLAST of mRNA_E-fasciculatus_F_contig143.3136.1 vs. uniprot
Match: D8LDY5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDY5_ECTSI) HSP 1 Score: 130 bits (327), Expect = 2.300e-31 Identity = 62/89 (69.66%), Postives = 69/89 (77.53%), Query Frame = 3
Query: 1842 LAEDTCYVEGVEGVSNDGVHCCPLGCGQCGGTGCGAIPEANIFPDGR-DLPVDATASDYCCLSAFATIQAECGDLGVEPPCLIPAAGTS 2105
LAEDTC+VEGVEGVS DGV+CCPLGCGQCGG GCG+ E+ IF D R +LP A S YCCLSAF + A CGDLGVEPPCLIP G +
Sbjct: 65 LAEDTCHVEGVEGVSGDGVYCCPLGCGQCGGIGCGSRDESLIFRDPRRELPAGAGTSSYCCLSAFDSSTAVCGDLGVEPPCLIPEGGNT 153
BLAST of mRNA_E-fasciculatus_F_contig143.3136.1 vs. uniprot
Match: D7FIS5_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIS5_ECTSI) HSP 1 Score: 111 bits (278), Expect = 1.440e-21 Identity = 110/382 (28.80%), Postives = 142/382 (37.17%), Query Frame = 3
Query: 987 GVDGIQGIRSGDNCCPLGCGQCGGTGCGSIDMGYITPYLDHEPAVGATSSSYCCSSSFTVDSPTCGDGVSPPCLISAE---NPETVTATLAPEVASTLMDTCGLPGMPGIMDTSGARCCPSGCGMCGGPGCGSIDMNLVAPTVEGDVPVDAKSGDYCCTSGVDIRDVTCGTGADEGYPPCLI----PAGTVTVTATLAPEVASALMDTCGLPGMPGIIDATETRCCPQGCGLCGGPGCGTVDM--NLVAPTVEGDVPTDAKSGTYCCTSGVDARDVTCGTGADEGHPPCLIPADLA------EDTCYVEGVEGVSNDGVHCCPLGCGQCGGTGCGAIPEANIFPDGRDLPVDATASDYCCLSAFATIQAECGDLGVEPPCLI 2087
G +G+ G +G CCPLGCGQC G+GC + A G TSSS CC C D PC+ + + + TC G+ G+ D +G CCP GCG C G GC + + + CC G+ C D G PC+ AG + TC G+ G+ D CCP GCG C G GC T L + + G SG YC +GV AD+ E+TC G+EG+ + G CCPL CGQCGG+GC +N +D CC S C D E PC+I
Sbjct: 273 GTEGLDG--NGVVCCPLGCGQCAGSGCSTAGA-----------ANGLTSSS-CCGGGIKSSGNYCDDTGVAPCIYGSAPDAGDDXXXXXXXXXXXXXXVGTCS-DGIEGL-DGNGVVCCPLGCGQCAGSGCSTAGA------------ANGLTSSSCCGGGIKSSGNYCD---DTGVAPCIYGSAPDAGDDXXXXXXXXXXXXXXVGTCS-DGIEGL-DGNGVVCCPLGCGQCAGSGCSTAGAANGLTSSSCCGG--RIKSSGNYCDDTGVAPCIYGSAPNADDXXXXXXXXXXXXXXXXXXENTCS-NGLEGIDHKGEVCCPLRCGQCGGSGCSTSGASN-----------GLGADSCCSSEINDSGRHCDDTN-EAPCII 606
BLAST of mRNA_E-fasciculatus_F_contig143.3136.1 vs. uniprot
Match: A0A6H5JC43_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC43_9PHAE) HSP 1 Score: 107 bits (268), Expect = 5.220e-21 Identity = 87/276 (31.52%), Postives = 106/276 (38.41%), Query Frame = 3
Query: 1293 GMPGIMDTSGARCCPSGCGMCGGPGCGSIDMNLVAPTVEGDVPVDAKSGDYCCTSGVDIRDVTCGTGADEGYPPCLIPAGTVTVTATLAPEVASALMDTCGLPGMPGIIDATETRCCPQGCGLCGGPGCGTVDMNLVAPTVEGDVPTDAKSGTYCCTSGVDARDVTCGTGADEGHPPCLI-----PADLAEDTCYVEGVEGVSNDGVHCCPLGCGQCGGTGCGAIPEANIFPDGRDLPVDATASDYCCLSAFATIQAECGDLGVEPPCLIPAAGTS 2105
G+ GI D +G CCP CG CGG GC + G CC GV D C + PC+I + P SA + GL G ID CCP GCG CGG GC T G+ CC + A C D PC+I P+ +TC GVEG+ +GV CCPLGCGQCGG GC A +D CC + C + E PC+I + TS
Sbjct: 196 GLEGI-DANGVVCCPLACGQCGGTGCNTSGAAF------------GLDGSSCCGGGVKASDEYCD---ETNEAPCII-------GSRPTPSPTSANTCSNGLEG----IDGNGVVCCPLGCGQCGGTGCNTSGAAA------------GLDGSSCCGGSIKASGKYCDETNDA---PCIIGSSPAPSPTPSETCS-NGVEGIDGNGVVCCPLGCGQCGGAGCTTSGAAA-----------GLGADSCCGGSIKASDEYCDETN-EAPCIIGSRPTS 416
BLAST of mRNA_E-fasciculatus_F_contig143.3136.1 vs. uniprot
Match: A0A6H5JYT7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYT7_9PHAE) HSP 1 Score: 108 bits (269), Expect = 3.230e-20 Identity = 115/391 (29.41%), Postives = 148/391 (37.85%), Query Frame = 3
Query: 993 DGIQGIR-SGDNCCPLGCGQCGGTGCGSIDMGYITPYLDHEPAVGATSSSYCCSSSFTVDSPTCGDGVSPPCLI-SAENPETVTATLAPEVASTLMDTCGLPGMPGIMDTSGARCCPSGCGMCGGPGC---GSIDMNLVAPTVEGDVPVDAKSGDYCCTSGVDIRDVTCGTGADEGYPPCLIPAGTVTVTATLAPEVASALMDTCGLPGMPGIIDATETRCCPQGCGLCGGPGCGTVDMNLVAPTVEGDVPTDAKSGTYCCTSGVDARDVTCGTGADEGHPPCLI-PADLAED--------------------TCYVEGVEGVSNDGVHCCPLGCGQCGGTGCGAIPEANIFPDGRDLPVDATASDYCCLSAFATIQAECGDLGVEPPCLI 2087
DGI+GI +G CCPLGCGQC G+GC A G TSSS CC C D PC+ SA + + T D G+ GI D +G CCP GCG C G GC G+ + + G + SG+YC +GV AD+ + TC G+ GI D CCP GCG C G GCG + + + CC G+ + C D G PC+ A A+D TC + +EG+ + G CCPLGCGQCGG+GC +N ++ CC S C D E PC+I
Sbjct: 472 DGIEGIDGNGVVCCPLGCGQCAGSGCSIAGA-----------ANGLTSSS-CCGGGIKSSGNYCDDTGVAPCIYGSAPDTDXXXXXXXXXXIGTCSD-----GIEGI-DGNGVVCCPLGCGQCAGSGCSIAGAANGLTSSSCCGGGIK---SSGNYCDDTGVAPCIYGSAPNADDXXXXXXXXXXXXXXXXXXXD------VGTCS-DGIEGI-DGNGVVCCPLGCGQCAGSGCGAAGA------------ANGLTSSSCCGGGIKSSGNYCD---DTGVAPCIYGSAPNADDDXXXXXXXXXXXXXXXXXATTCSND-LEGIDHKGEVCCPLGCGQCGGSGCSTSGASN-----------GLGAESCCSSEVKDSGRYCDDAN-EAPCII 805
BLAST of mRNA_E-fasciculatus_F_contig143.3136.1 vs. uniprot
Match: A0A6H5L8H5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8H5_9PHAE) HSP 1 Score: 97.8 bits (242), Expect = 5.350e-17 Identity = 82/274 (29.93%), Postives = 106/274 (38.69%), Query Frame = 3
Query: 432 TDGV--LSDDGFLCCPTGCGTCGGSTCSSIPLSWVMPGDTPLSVDTSVPDGATSADYCCYGIF-------ETTVTEC--GAGVEAPCRMPQEIETKVDTCGVDGIVGTAGTGNMCCPLGCAICAGTGCGDQHISYVFPGELPWSTTAPEGSETQDFCCLKAFRGVGECGVDGAEPPCLI---PEVVETLAPRDLPDDNCGVDGIQGIR-SGDNCCPLGCGQCGGTGCGSIDMGYITPYLDHEPAVGATSSSYCCSSSFTVDSPTCGDGVSPPCL 1208
+DG+ + +G +CCP GCG C GS CS+ +G TS+ C GI +T V C G+ +A V TC DGI G G G +CCPLGC CAG+GC ST T CC + G D PC+ P+ + DGI+GI +G CCPLGCGQC G+GC + + A +SS CC C D PC+
Sbjct: 536 SDGIEGIDGNGVVCCPLGCGQCAGSGCSTA----------------GAANGLTSSSCCGGGIKSSGNYCDDTGVAPCIYGSAPDADXXXXXXXXXXVGTCN-DGIEGIDGNGVVCCPLGCGQCAGSGC---------------STAGAANGLTSSSCCGGGIKSSGNYCDDTGVAPCIYGSAPDADDXXXXXXXXXVGTCSDGIEGIDGNGVVCCPLGCGQCVGSGCST------------DGAANGLTSSSCCGGEIKSSGNYCDDTGVAPCI 765
BLAST of mRNA_E-fasciculatus_F_contig143.3136.1 vs. uniprot
Match: D7G651_ECTSI (Mannuronan C-5-epimerase C-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G651_ECTSI) HSP 1 Score: 96.7 bits (239), Expect = 1.130e-16 Identity = 88/293 (30.03%), Postives = 120/293 (40.96%), Query Frame = 3
Query: 663 MPQEIETKVDTCGVDGIVGTAGTGNMCCPLGCAICAGTGCGDQHISYVFPGELPWSTTAPEGSETQDFCCLKAFRGVGECGVDGAEPPCLI---PEV--VETLAPRDLPDDNCGVDGIQGIRSGDNCCPLGCGQCGGTGCGSIDMGYITPYLDHEPAVGATSSSYCCSSSFTVDSPTCGDGVSPPCLI-SAENPETVTATLAPEVASTLMDTCGLPGMPGIMDTSGARCCPSGCGMCGGPGCGSIDMNLVAPTVEGDVPVDAKSGDYCCTSGVDIRDVTCGTGADEGYPPCLI 1523
+ E + TC DG G G G +CCP+GC CAG GCG + GSE+ CC + +G D E PC+I P+ V++ + + + G +GI G +G CCP+GCGQC G GCG+ + S CC + C D PC+I S + + V + A E TC G GI D +G CCP GCG C G GCG+ + + CC +GV + C D PC+I
Sbjct: 327 VDSESADETQTCS-DGTEGIDGNGVVCCPIGCGQCAGDGCGTAGSANGL------------GSES---CCGGGVKSLGLYCDDTNEAPCIIGSRPDTDDVDSESADETQTCSDGTEGIDG--NGVVCCPIGCGQCAGDGCGTAG------------SANGLGSESCCGNGVKSLGLYCDDTNEAPCIIGSRPDTDDVDSESADET-----QTCS-DGTEGI-DGNGVVCCPIGCGQCAGDGCGTAGS------------ANGLGSESCCGNGVKSLGLYCD---DTNEAPCII 567
BLAST of mRNA_E-fasciculatus_F_contig143.3136.1 vs. uniprot
Match: A0A6H5K5M2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5M2_9PHAE) HSP 1 Score: 83.2 bits (204), Expect = 3.770e-14 Identity = 70/224 (31.25%), Postives = 77/224 (34.38%), Query Frame = 3
Query: 705 DGIVGTAGTGNMCCPLGCAICAGTGCGDQHISYVFPGELPWSTTAPEGSETQDFCCLKAFRGVGECGVDGAEPPCLIPEVVETLAPRDLPDDNCGVDGIQGIR-SGDNCCPLGCGQCGGTGCGSIDMGYITPYLDHEPAVGATSSSYCCSSSFTVDSPTCGDGVSPPCLISAENPETVTATLAPEVASTLMDTCGLPGMPGIMDTSGARCCPSGCGMCGGPGCG 1373
DGI G G G +CCPLGC C GTGC ST + CC + G D PC+ E C DGI+GI +G CCPLGCGQCGGTGC S A S CC S C D T P +D G CCP GCG CG GCG
Sbjct: 5 DGIEGIDGNGVVCCPLGCGQCVGTGC---------------STAGAANGLSSGSCCGGEIKDSGNYCDDTGVAPCIYGSAPEDXXXXXX-XXTCS-DGIEGIDGNGAVCCPLGCGQCGGTGCTSAG------------AANGLDSGSCCGGSIKSSGNYCDD------------------------------TGEAPNDLECIDHKGEICCPLGCGPCGESGCG 169 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig143.3136.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig143.3136.1 >prot_E-fasciculatus_F_contig143.3136.1 ID=prot_E-fasciculatus_F_contig143.3136.1|Name=mRNA_E-fasciculatus_F_contig143.3136.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=983bp MMRSSALLLLLLWTPPSRVSSQLTDSTTTITTTTTACEDPSQVATCNGIQback to top mRNA from alignment at E-fasciculatus_F_contig143:216..12855- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig143.3136.1 ID=mRNA_E-fasciculatus_F_contig143.3136.1|Name=mRNA_E-fasciculatus_F_contig143.3136.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=12640bp|location=Sequence derived from alignment at E-fasciculatus_F_contig143:216..12855- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig143:216..12855- >mRNA_E-fasciculatus_F_contig143.3136.1 ID=mRNA_E-fasciculatus_F_contig143.3136.1|Name=mRNA_E-fasciculatus_F_contig143.3136.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=5898bp|location=Sequence derived from alignment at E-fasciculatus_F_contig143:216..12855- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |