mRNA_E-fasciculatus_F_contig14289.3129.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig14289.3129.1
Unique NamemRNA_E-fasciculatus_F_contig14289.3129.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig14289.3129.1 vs. uniprot
Match: D7FYI6_ECTSI (F-actin-capping protein subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYI6_ECTSI)

HSP 1 Score: 385 bits (990), Expect = 1.370e-133
Identity = 194/203 (95.57%), Postives = 195/203 (96.06%), Query Frame = 1 
Query:    1 QPLQEATDPETGRRYLRCEYNRDASSYRSPWSNKYDPPIEDGFTPGDRLRQMEARRHANMLLDAYREVYFSGGVSSVYLWEEEVEGEADNATGAAGSFAGCFLILKRVGGDGEEGPVGAWESSHVVQVVLSKKNPTQATYKVNTTVMLSVDPEDEAVGATSLSGNLAREKEETKAFSTDSDHLHNLGVMIEAMENTLRSDMDG 609
            QPLQEATDPETGRRYLRCEYNRDASSYRSPWSNKYDPPIEDGFTPGDRLRQME    ANMLLDAYREVYFSGGVSSVYLWEEE +GEADNATGAAGSFAGCFLILKRVGGDGEEGPVGAWESSHVVQVVLSKKNPTQATYKVNTTVMLSV PEDEAVGATSLSGNLAREKEETK FSTDSDHL NLGVMIEAMENTLRSDMDG
Sbjct:   47 QPLQEATDPETGRRYLRCEYNRDASSYRSPWSNKYDPPIEDGFTPGDRLRQME--EDANMLLDAYREVYFSGGVSSVYLWEEEADGEADNATGAAGSFAGCFLILKRVGGDGEEGPVGAWESSHVVQVVLSKKNPTQATYKVNTTVMLSVGPEDEAVGATSLSGNLAREKEETKTFSTDSDHLQNLGVMIEAMENTLRSDMDG 247
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BLAST of mRNA_E-fasciculatus_F_contig14289.3129.1 vs. uniprot
Match: A0A6H5KTN9_9PHAE (F-actin-capping protein subunit beta n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTN9_9PHAE)

HSP 1 Score: 272 bits (696), Expect = 4.260e-91
Identity = 138/144 (95.83%), Postives = 139/144 (96.53%), Query Frame = 1 
Query:  178 MLLDAYREVYFSGGVSSVYLWEEEVEGEADNATGAAGSFAGCFLILKRVGGDGEEGPVGAWESSHVVQVVLSKKNPTQATYKVNTTVMLSVDPEDEAVGATSLSGNLAREKEETKAFSTDSDHLHNLGVMIEAMENTLRSDMDG 609
            MLLDAYREVYFSGGVSSVYLWEEE EG ADNATGAAGSFAGCFLILKRVGGDGEEGP GAWESSHVVQVVLSKKNPTQATYKVNTTVMLSVDP+DEAVGATSLSGNLAREKEETK FSTDSDHL NLGVMIEAMENTLRSDMDG
Sbjct:    1 MLLDAYREVYFSGGVSSVYLWEEEAEGGADNATGAAGSFAGCFLILKRVGGDGEEGPAGAWESSHVVQVVLSKKNPTQATYKVNTTVMLSVDPKDEAVGATSLSGNLAREKEETKTFSTDSDHLQNLGVMIEAMENTLRSDMDG 144
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BLAST of mRNA_E-fasciculatus_F_contig14289.3129.1 vs. uniprot
Match: A0A835YY13_9STRA (F-actin-capping protein subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY13_9STRA)

HSP 1 Score: 191 bits (486), Expect = 3.530e-57
Identity = 111/214 (51.87%), Postives = 132/214 (61.68%), Query Frame = 1 
Query:    1 QPLQEATDPETGRRYLRCEYNRDASSYRSPWSNKYDPPIEDGFTPGDRLRQMEARRHANMLLDAYREVYFSGGVSSVYLWEEEVEGEADNATGAAGSFAGCFLILKRVGGDGEEGPVGAWESSHVVQVVLSKKNPTQATYKVNTTVMLSVDPEDEAVGA-----------TSLSGNLAREKEETKAFSTDSDHLHNLGVMIEAMENTLRSDMDG 609
            QPLQEATDP TGR+YL CEYNRDA SYRSPWSN YDPP+ED +   D+LRQ+E    AN LLDAYRE+Y+ GG SSVYLW+ E         G+   FAG FLI K       EG   AWES HV+QV        +ATYK+N+T+MLSV                    TSLSGN+    E+T AF++  DHL N+G MIE MEN +R  +DG
Sbjct:   44 QPLQEATDPVTGRQYLLCEYNRDADSYRSPWSNAYDPPLEDAYELRDQLRQLEI--DANELLDAYRELYYQGGTSSVYLWDLE--------EGSGKGFAGAFLIKKSTA----EGT--AWESIHVIQVDPDVGGGKRATYKLNSTIMLSVQXXXXXXXXXXXXXXXXXXXTSLSGNMTSAAEQTLAFASQDDHLSNIGKMIEKMENDVRMSIDG 241
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BLAST of mRNA_E-fasciculatus_F_contig14289.3129.1 vs. uniprot
Match: A0A7S4A8I8_9STRA (F-actin-capping protein subunit beta n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A8I8_9STRA)

HSP 1 Score: 191 bits (486), Expect = 8.080e-57
Identity = 102/202 (50.50%), Postives = 133/202 (65.84%), Query Frame = 1 
Query:    1 QPLQEATDPETGRRYLRCEYNRDASSYRSPWSNKYDPPIEDGFTPGDRLRQMEARRHANMLLDAYREVYFSGGVSSVYLWEEEVEGEADNATGAAGSFAGCFLILKRVGGDGEEGPVGAWESSHVVQVVLSKKNPTQATYKVNTTVMLSVDPEDEAVGATSLSGNLAREKEETKAFSTDSDHLHNLGVMIEAMENTLRSDMD 606
            QPL+EA   +TGR YL C+YNRD  S+RSPWSNKYDPPI+DGF P ++LR++E    AN L D YRE+YF GG SSVYLWE  ++G+          FAGCFLI K+V G  E    G W+S HVV+V L + N   A YK+ TTV+L++D + E+VG T+LSG L R  E+      +  H+HN+G +IE  E  +R +MD
Sbjct:  110 QPLEEAKCKDTGRAYLLCDYNRDGDSHRSPWSNKYDPPIDDGFVPSEKLRRLEVE--ANTLFDCYRELYFEGGTSSVYLWE--LDGD---------DFAGCFLIKKKVSGH-EFVTEGCWDSIHVVEVNL-EDNGKAANYKLTTTVILTMDVQKESVGDTNLSGTLTRTAEKRSVIDAEHTHMHNMGTLIEDTETDIRVNMD 296
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BLAST of mRNA_E-fasciculatus_F_contig14289.3129.1 vs. uniprot
Match: F0YCA6_AURAN (F-actin-capping protein subunit beta n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YCA6_AURAN)

HSP 1 Score: 187 bits (474), Expect = 1.080e-55
Identity = 103/202 (50.99%), Postives = 131/202 (64.85%), Query Frame = 1 
Query:    1 QPLQEATDPETGRRYLRCEYNRDASSYRSPWSNKYDPPIEDGFTPGDRLRQMEARRHANMLLDAYREVYFSGGVSSVYLWEEEVEGEADNATGAAGSFAGCFLILKRVGGDGEEGPVGAWESSHVVQVVLSKKNPTQATYKVNTTVMLSVDPEDEAVGATSLSGNLAREKEETKAFSTDSDHLHNLGVMIEAMENTLRSDMD 606
            QPL+EAT  E+GR+YL C+YNRD  SYRSPWSN Y+PP++DGF P  +LR +E    AN L DAYRE+YF GG SSVYLW+ +            G FAGCFLI K V G  E    GAW+S HVV+V  ++    +ATYK+ TTVMLS+D    AVG ++LSG+L R  E+  A      H+ N+G MIE ME  +R+ +D
Sbjct:   48 QPLEEATCAESGRKYLLCDYNRDGDSYRSPWSNAYEPPLDDGFVPSAKLRALEVE--ANALFDAYRELYFEGGTSSVYLWDLD------------GGFAGCFLIKKGVSGH-EFVSTGAWDSIHVVEV--AEAGDGRATYKLTTTVMLSMDVHKPAVGDSNLSGSLTRMAEKACAVDEAHPHVANIGSMIEDMETDIRTYLD 232
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BLAST of mRNA_E-fasciculatus_F_contig14289.3129.1 vs. uniprot
Match: A0A7S2F5N5_9STRA (F-actin-capping protein subunit beta n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F5N5_9STRA)

HSP 1 Score: 182 bits (462), Expect = 6.950e-54
Identity = 102/202 (50.50%), Postives = 131/202 (64.85%), Query Frame = 1 
Query:    1 QPLQEATDPETGRRYLRCEYNRDASSYRSPWSNKYDPPIEDGFTPGDRLRQMEARRHANMLLDAYREVYFSGGVSSVYLWEEEVEGEADNATGAAGSFAGCFLILKRVGGDGEEGPVGAWESSHVVQVVLSKKNPTQATYKVNTTVMLSVDPEDEAVGATSLSGNLAREKEETKAFSTDSDHLHNLGVMIEAMENTLRSDMD 606
            QPLQEAT  +TGR +L C+YNRD  SYRSPWSN+YDPPI+DGFTP + LRQME    AN L D+YR+ Y+ GG SSVYLW+ +              FAGCFLI K V G       G+W+S HVV+V  ++K   QATYK+ +T++LS+     AVG ++LSG + ++KE T   +    H  N+G MIE ME  LRS+MD
Sbjct:   49 QPLQEATCGQTGRPFLLCDYNRDGDSYRSPWSNQYDPPIDDGFTPSEALRQMEI--DANSLYDSYRDQYYEGGTSSVYLWDLD------------DGFAGCFLIKKSVEGHAFVS-AGSWDSIHVVEV--TEKGGGQATYKLTSTLLLSMGVNKAAVGDSNLSGCMTKQKEMTCEVTAVRPHTTNMGTMIEDMEIELRSNMD 233
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BLAST of mRNA_E-fasciculatus_F_contig14289.3129.1 vs. uniprot
Match: A0A6U4L9K2_9STRA (F-actin-capping protein subunit beta n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4L9K2_9STRA)

HSP 1 Score: 181 bits (459), Expect = 2.140e-53
Identity = 94/202 (46.53%), Postives = 130/202 (64.36%), Query Frame = 1 
Query:    1 QPLQEATDPETGRRYLRCEYNRDASSYRSPWSNKYDPPIEDGFTPGDRLRQMEARRHANMLLDAYREVYFSGGVSSVYLWEEEVEGEADNATGAAGSFAGCFLILKRVGGDGEEGPVGAWESSHVVQVVLSKKNPTQATYKVNTTVMLSVDPEDEAVGATSLSGNLAREKEETKAFSTDSDHLHNLGVMIEAMENTLRSDMD 606
            QPL+E T   +G++YL C+YNRD  SYRSPWSN+YDPP++DGF P ++LR ME +  AN L D+YRE+YF GG SSVYLW+ +  G           FAGCFL+ K +   G     G+W S HV++V   +    +A+YK+ TTV+LS D +    G+T LSG+L R+K  T   + +  HL N+G +IE ME  +RS+M+
Sbjct:   49 QPLEEGTCSASGKKYLMCDYNRDGDSYRSPWSNQYDPPLDDGFVPSEQLRNMEIQ--ANELFDSYRELYFEGGTSSVYLWDLDGAG-----------FAGCFLVKKSIESTGVV-KAGSWNSIHVIEVS-EQDGGKKASYKLTTTVLLSADVDKPECGSTDLSGSLTRQKARTCEINAEHTHLSNMGEIIEDMETEMRSNMN 235
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BLAST of mRNA_E-fasciculatus_F_contig14289.3129.1 vs. uniprot
Match: F2UF43_SALR5 (F-actin-capping protein subunit beta n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UF43_SALR5)

HSP 1 Score: 172 bits (436), Expect = 4.180e-50
Identity = 96/202 (47.52%), Postives = 127/202 (62.87%), Query Frame = 1 
Query:    1 QPLQEATDPETGRRYLRCEYNRDASSYRSPWSNKYDPPIEDGFTPGDRLRQMEARRHANMLLDAYREVYFSGGVSSVYLWEEEVEGEADNATGAAGSFAGCFLILKRVGGDGEEGPVGAWESSHVVQVVLSKKNPTQATYKVNTTVMLSVDPEDEAVGATSLSGNLAREKEETKAFSTDSDHLHNLGVMIEAMENTLRSDMD 606
            QPL+ A D  +GR YL C+YNRDA SYRSPWSNKYDPP+EDG  P D LR++E +  AN   D YRE+Y+ GGVSSVYLW+ + EG           FAG  LI K   GDG +   G ++S HV +V  + +  + ATYK+ +TVML ++   E  G   L G+L R+ E+T   S  S H+ N+G M+E MEN +R+ +D
Sbjct:   45 QPLKIAKDEASGRDYLLCDYNRDADSYRSPWSNKYDPPLEDGAVPSDSLRELEIQ--ANQAFDTYRELYYEGGVSSVYLWDLQ-EG-----------FAGVILIKKV--GDGSKKIKGCYDSIHVFEVQETSRG-SNATYKLTSTVMLWLETNKETSGMMQLGGSLTRQAEKTLTVSQSSPHIANIGTMVEDMENNMRNTLD 229
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BLAST of mRNA_E-fasciculatus_F_contig14289.3129.1 vs. uniprot
Match: A9V6Q7_MONBE (F-actin-capping protein subunit beta n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V6Q7_MONBE)

HSP 1 Score: 170 bits (430), Expect = 3.840e-49
Identity = 92/199 (46.23%), Postives = 123/199 (61.81%), Query Frame = 1 
Query:    1 QPLQEATDPETGRRYLRCEYNRDASSYRSPWSNKYDPPIEDGFTPGDRLRQMEARRHANMLLDAYREVYFSGGVSSVYLWEEEVEGEADNATGAAGSFAGCFLILKRVGGDGEEGPVGAWESSHVVQVVLSKKNPTQATYKVNTTVMLSVDPEDEAVGATSLSGNLAREKEETKAFSTDSDHLHNLGVMIEAMENTLRS 597
            QPL+ ATDPE+GR YL C+YNRD  SYRSPWSN+Y P ++DG  P   LR++E +  AN   D+YR++Y+ GG SSVYLW+ E +G           FAG  LI K   GDG +   G W+S HV QV L K N   ATY++ +TVML ++   +  G   L G+L R+ E+      ++ H+ N+G MIE MEN +RS
Sbjct:   45 QPLKRATDPESGRHYLLCDYNRDGDSYRSPWSNQYYPAMDDGVVPSPELRELEIQ--ANNAFDSYRDLYYEGGASSVYLWDTEEDG-----------FAGVVLIKKI--GDGSKKIKGCWDSIHVFQV-LEKSNGRNATYQLTSTVMLWLETNKDGSGLMQLGGSLTRQAEQDCTVDDNNPHIANIGRMIEDMENQMRS 227
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BLAST of mRNA_E-fasciculatus_F_contig14289.3129.1 vs. uniprot
Match: A0A1I8A3W4_9BILA (F-actin-capping protein subunit beta n=1 Tax=Steinernema glaseri TaxID=37863 RepID=A0A1I8A3W4_9BILA)

HSP 1 Score: 170 bits (430), Expect = 4.060e-49
Identity = 90/202 (44.55%), Postives = 124/202 (61.39%), Query Frame = 1 
Query:    1 QPLQEATDPETGRRYLRCEYNRDASSYRSPWSNKYDPPIEDGFTPGDRLRQMEARRHANMLLDAYREVYFSGGVSSVYLWEEEVEGEADNATGAAGSFAGCFLILKRVGGDGEEGPVGAWESSHVVQVVLSKKNPTQATYKVNTTVMLSVDPEDEAVGATSLSGNLAREKEETKAFSTDSDHLHNLGVMIEAMENTLRSDMD 606
            QPL+ A D +TGR YL C+YNRD  SYRSPW+N YDPP+EDG  P D+LR++E    AN   +AYR++YF GGVSSVY W+ E              FAG  LI K  GG G + P G W+S HV+++ L K N  QA YK+ +TVML +       G+ ++ G++ R+ E+    +  + HL N+G MIE  E+ +RS ++
Sbjct:   45 QPLKIARDKDTGREYLLCDYNRDEDSYRSPWTNLYDPPLEDGAVPSDKLRKLEIE--ANAAFEAYRDMYFEGGVSSVYFWDLEY------------GFAGVVLIKKECGG-GHDAPNGCWDSIHVIEI-LEKANGRQAHYKLTSTVMLWLQTNKNNTGSMNVGGSMTRQTEQDCHLNDQNPHLVNIGKMIEEQESKMRSTLN 230
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14289.3129.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYI6_ECTSI1.370e-13395.57F-actin-capping protein subunit beta n=1 Tax=Ectoc... [more]
A0A6H5KTN9_9PHAE4.260e-9195.83F-actin-capping protein subunit beta n=1 Tax=Ectoc... [more]
A0A835YY13_9STRA3.530e-5751.87F-actin-capping protein subunit beta n=1 Tax=Tribo... [more]
A0A7S4A8I8_9STRA8.080e-5750.50F-actin-capping protein subunit beta n=2 Tax=Pelag... [more]
F0YCA6_AURAN1.080e-5550.99F-actin-capping protein subunit beta n=1 Tax=Aureo... [more]
A0A7S2F5N5_9STRA6.950e-5450.50F-actin-capping protein subunit beta n=1 Tax=Dicty... [more]
A0A6U4L9K2_9STRA2.140e-5346.53F-actin-capping protein subunit beta n=1 Tax=Phaeo... [more]
F2UF43_SALR54.180e-5047.52F-actin-capping protein subunit beta n=1 Tax=Salpi... [more]
A9V6Q7_MONBE3.840e-4946.23F-actin-capping protein subunit beta n=1 Tax=Monos... [more]
A0A1I8A3W4_9BILA4.060e-4944.55F-actin-capping protein subunit beta n=1 Tax=Stein... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14289contigE-fasciculatus_F_contig14289:276..2305 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score388.7
Seed ortholog evalue1.7e-105
Seed eggNOG ortholog2880.D7FYI6
KEGG koko:K10365
KEGG Pathwayko04144,map04144
GOsGO:0000902,GO:0003674,GO:0003779,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005856,GO:0005884,GO:0006950,GO:0006996,GO:0007010,GO:0007015,GO:0008064,GO:0008092,GO:0008150,GO:0008290,GO:0009266,GO:0009408,GO:0009628,GO:0009653,GO:0009987,GO:0010639,GO:0015629,GO:0016043,GO:0030029,GO:0030036,GO:0030832,GO:0030833,GO:0030834,GO:0030835,GO:0030837,GO:0031333,GO:0032271,GO:0032272,GO:0032502,GO:0032535,GO:0032956,GO:0032970,GO:0032989,GO:0032991,GO:0033043,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043242,GO:0043244,GO:0043254,GO:0044087,GO:0044422,GO:0044424,GO:0044430,GO:0044446,GO:0044464,GO:0044877,GO:0048519,GO:0048523,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051015,GO:0051016,GO:0051128,GO:0051129,GO:0051493,GO:0051494,GO:0051693,GO:0065007,GO:0065008,GO:0071840,GO:0090066,GO:0097435,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0110053,GO:1901879,GO:1901880,GO:1902903,GO:1902904
EggNOG free text desc.barbed-end actin filament capping
EggNOG OGsKOG3174@1,KOG3174@2759
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131,ko04147,ko04812
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionF-actin-capping protein subunit beta
Ec32 orthologEc-23_003050.1
Exons4
Model size609
Cds size609
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14289.3129.1prot_E-fasciculatus_F_contig14289.3129.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig14289 276..2305 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927919.8427827-CDS-E-fasciculatus_F_contig14289:275..4491622927919.8427827-CDS-E-fasciculatus_F_contig14289:275..449Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14289 276..449 -
1695995750.8986893-CDS-E-fasciculatus_F_contig14289:275..4491695995750.8986893-CDS-E-fasciculatus_F_contig14289:275..449Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14289 276..449 -
1622927919.8615546-CDS-E-fasciculatus_F_contig14289:787..8411622927919.8615546-CDS-E-fasciculatus_F_contig14289:787..841Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14289 788..841 -
1695995750.9094102-CDS-E-fasciculatus_F_contig14289:787..8411695995750.9094102-CDS-E-fasciculatus_F_contig14289:787..841Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14289 788..841 -
1622927919.8779485-CDS-E-fasciculatus_F_contig14289:1432..16441622927919.8779485-CDS-E-fasciculatus_F_contig14289:1432..1644Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14289 1433..1644 -
1695995750.923166-CDS-E-fasciculatus_F_contig14289:1432..16441695995750.923166-CDS-E-fasciculatus_F_contig14289:1432..1644Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14289 1433..1644 -
1622927919.8924057-CDS-E-fasciculatus_F_contig14289:2136..23051622927919.8924057-CDS-E-fasciculatus_F_contig14289:2136..2305Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14289 2137..2305 -
1695995750.9351027-CDS-E-fasciculatus_F_contig14289:2136..23051695995750.9351027-CDS-E-fasciculatus_F_contig14289:2136..2305Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14289 2137..2305 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig14289.3129.1

>prot_E-fasciculatus_F_contig14289.3129.1 ID=prot_E-fasciculatus_F_contig14289.3129.1|Name=mRNA_E-fasciculatus_F_contig14289.3129.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=203bp
QPLQEATDPETGRRYLRCEYNRDASSYRSPWSNKYDPPIEDGFTPGDRLR
QMEARRHANMLLDAYREVYFSGGVSSVYLWEEEVEGEADNATGAAGSFAG
CFLILKRVGGDGEEGPVGAWESSHVVQVVLSKKNPTQATYKVNTTVMLSV
DPEDEAVGATSLSGNLAREKEETKAFSTDSDHLHNLGVMIEAMENTLRSD
MDG
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mRNA from alignment at E-fasciculatus_F_contig14289:276..2305-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig14289.3129.1 ID=mRNA_E-fasciculatus_F_contig14289.3129.1|Name=mRNA_E-fasciculatus_F_contig14289.3129.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2030bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14289:276..2305- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CAGCCGCTTCAAGAGGCGACGGACCCAGAGACCGGTCGGCGCTACCTGCG
GTGCGAGTACAACCGCGACGCGAGCTCCTACCGCAGCCCGTGGAGCAACA
AGTACGACCCGCCCATCGAGGACGGTTTCACTCCCGGGGATCGACTGAGA
CAGATGGAGGCGAGGCGGCGTATTTATTTAGAGGGGGGGGGGGGCTGGGG
GCGGGGGNNNNNNNNNNTATGGAGAGTCCCTTCTTGGTGCAGATCATTCG
CAGGAGAAATGTCGTTTGCCCATGAGGGTGTGTACTCGTCATCGTGCCTG
AGGCGTTGCTTCTCCGATGCGTTCTCCTGTCGGCGGCCTTGATAACCTAC
GCTGCTATTCGAACGGGTTTGTATACATGCGTCTTGCGGCGTTTGCCTTT
CAGAAAACCCGGCTGGGCTATTTTGGAATCGGCCAATACTTACCGCAAGT
TCATCACGGGGGGTTAGGTTGGTACACGTGATTACGGCCTGCCTCCCTCC
CAGATCCGTCTCCATGGAGATGGCCCGAGTTGTCTGCAGACTACTTGTAG
GGTAAGCAAGCAAAACAAGCTGGCCTTTTGAGCCTCCTCCTCCTTTACCC
CTCTCCTCTCTCCCCTCCTGCCGGCCCCCTACACAACCCTATCCTGCTAC
ACTGCAGGAAGATGCCAACATGCTCCTGGACGCCTACCGCGAGGTGTACT
TCTCCGGGGGGGTTAGCTCCGTGTACCTGTGGGAGGAGGAGGTCGAGGGA
GAGGCGGATAATGCCACGGGGGCTGCGGGGAGCTTCGCCGGGTGCTTCTT
GATCCTGAAGCGCGTCGGCGGGGACGGGGAGGAGGGCCCGGTAGGGGCCT
GGGAAAGCTCACACGTCGTACAGGTACACGCCTAGGTAGTTCGTTTTCGG
TAGGAGATCTGTTGCGCGCACACTTTCTCGCCCCTCCTCGGCTTCGGCTT
GCTTCGGATTCACACCTTCGCGCAACCGAAATGACAGAAGTACATTGGGT
AGGGAAACGTGTTCAAACGTGCCTCCTCCGAGTTTTGAGGATGGTGACGC
ATTTTTTGTTTTTTCGAGACGCCGGTGCCGATCGTTGGTTCCTCAGCAGG
GAGGAAAGCACGCTCGCTCGTGTACAAGGGTTTTTGGTTTTGACTTCCTA
AGCAGCGTGCCGTTCTATTGCGTTAAGTGGCAACCGGTTGCGTGCGATAC
ACTCAGCGCCCGCGCCTAAGAACCTCTTGTTTTGGCCCGAGACTGGGGTG
GGTTCTCAGTTCCCAGGGTTACGCTAGAAATGGCCGCTTATAGGTTTTTG
TTTGGGGGTTCTGAACCGGGCTCACAACTGGTGCTCAATTACTTAGGTTT
TGAGTTCTTCGACGCTCAATTTCGTAAATGCCAAGGTCTCAAAAGTGCGG
GCGCTGTGAAACTGTAAACATGTGCAATGTGTGCTCGAAAAATCAACCCC
TTGTTCTCACGCAGGTCGTGTTGAGCAAGAAGAACCCGACGCAAGCAACG
TACAAGGTCAACACCACGGTGAGCTTCGCTGGGCCTCGGAGAATAATCTC
ACCCACCGCCCGTGTAAAAGCAGTTGCTCAGCACGAAACAGCAGTAGTGC
ATTTCGTGTGTCGCACGCCTTTTCCCCCCGCGGTGGTGAAGGTATGTTTG
CTACGAGAGAGGGCGAGTCACACATCTTTTGCATGCCACATGTTCTGCAT
GCCTCTCATGGTAGTTTTGAGCGATGACATTTCATGTGAGGCCCATTCTC
ATCCAAAACCACCGTAAGCATCAAAAAGCCACGACCTGTAGCCATCAATA
TCACCATCGTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTATGT
GTGCAGGTGATGCTGTCGGTGGACCCGGAGGACGAGGCTGTCGGGGCGAC
CAGCCTCTCGGGCAACCTGGCGAGGGAAAAGGAGGAGACCAAGGCCTTCT
CGACGGACAGCGACCACCTCCACAACCTGGGCGTGATGATCGAGGCGATG
GAGAACACGCTCAGGAGCGACATGGACGGT
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14289:276..2305-

>mRNA_E-fasciculatus_F_contig14289.3129.1 ID=mRNA_E-fasciculatus_F_contig14289.3129.1|Name=mRNA_E-fasciculatus_F_contig14289.3129.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1218bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14289:276..2305- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CAGCCGCTTCAAGAGGCGACGGACCCAGAGACCGGTCGGCGCTACCTGCG
GTGCGAGTACAACCGCGACGCGAGCTCCTACCGCAGCCCGTGGAGCAACA
AGTACGACCCGCCCATCGAGGACGGTTTCACTCCCGGGGATCGACTGAGA
CAGATGGAGGCGAGGCGGCCAGCCGCTTCAAGAGGCGACGGACCCAGAGA
CCGGTCGGCGCTACCTGCGGTGCGAGTACAACCGCGACGCGAGCTCCTAC
CGCAGCCCGTGGAGCAACAAGTACGACCCGCCCATCGAGGACGGTTTCAC
TCCCGGGGATCGACTGAGACAGATGGAGGCGAGGCGGCATGCCAACATGC
TCCTGGACGCCTACCGCGAGGTGTACTTCTCCGGGGGGGTTAGCTCCGTG
TACCTGTGGGAGGAGGAGGTCGAGGGAGAGGCGGATAATGCCACGGGGGC
TGCGGGGAGCTTCGCCGGGTGCTTCTTGATCCTGAAGCGCGTCGGCGGGG
ACGGGGAGGAGGGCCCGGTAGGGGCCTGGGAAAGCTCACACGTCGTACAG
ATGCCAACATGCTCCTGGACGCCTACCGCGAGGTGTACTTCTCCGGGGGG
GTTAGCTCCGTGTACCTGTGGGAGGAGGAGGTCGAGGGAGAGGCGGATAA
TGCCACGGGGGCTGCGGGGAGCTTCGCCGGGTGCTTCTTGATCCTGAAGC
GCGTCGGCGGGGACGGGGAGGAGGGCCCGGTAGGGGCCTGGGAAAGCTCA
CACGTCGTACAGGTCGTGTTGAGCAAGAAGAACCCGACGCAAGCAACGTA
CAAGGTCAACACCACGGTCGTGTTGAGCAAGAAGAACCCGACGCAAGCAA
CGTACAAGGTCAACACCACGGTGATGCTGTCGGTGGACCCGGAGGACGAG
GCTGTCGGGGCGACCAGCCTCTCGGGCAACCTGGCGAGGGAAAAGGAGGA
GACCAAGGCCTTCTCGACGGACAGCGACCACCTCCACAACCTGGGCGTGA
TGATCGAGGCGATGGAGAACACGCTCAGGAGCGACATGGACGGTGTGATG
CTGTCGGTGGACCCGGAGGACGAGGCTGTCGGGGCGACCAGCCTCTCGGG
CAACCTGGCGAGGGAAAAGGAGGAGACCAAGGCCTTCTCGACGGACAGCG
ACCACCTCCACAACCTGGGCGTGATGATCGAGGCGATGGAGAACACGCTC
AGGAGCGACATGGACGGT
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