prot_E-fasciculatus_F_contig14281.3127.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-fasciculatus_F_contig14281.3127.1
Unique Name	prot_E-fasciculatus_F_contig14281.3127.1
Type	polypeptide
Organism	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length	142

Homology

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BLAST of mRNA_E-fasciculatus_F_contig14281.3127.1 vs. uniprot
Match: A0A6H5L599_9PHAE (4Fe-4S ferredoxin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L599_9PHAE)

HSP 1 Score: 214 bits (545), Expect = 5.300e-65
Identity = 117/141 (82.98%), Postives = 122/141 (86.52%), Query Frame = 0

Query:    1 MPVRRRPGSSAGDRALPCVGVGFSLALMLGALLRPRGAQSFVVVPGAVVGGVIDSTAAAAVVPAAAVRSRGGVERWQRRPSVGRMGVGVVLRASMDDDDEFDPDAWTDELRENEGKTQGGDDMGMGVSNTVKKKRRADPKY 141
            MPVRRRPGS A +  LPC+GVG SLA+ +GAL RPRGAQSFVVVPGA VGGVID TAA    P   VRSRGGVER QRRPSVG MG+ VVLRASMDDDDEFDPDAWTDELRENEGKTQGGDDMGMGVSNTVKKKRRADPKY
Sbjct:    1 MPVRRRPGSFAEESGLPCLGVGMSLAI-IGALCRPRGAQSFVVVPGAAVGGVIDGTAAITAAPT--VRSRGGVERCQRRPSVGGMGLEVVLRASMDDDDEFDPDAWTDELRENEGKTQGGDDMGMGVSNTVKKKRRADPKY 138

The following BLAST results are available for this feature:

BLAST of mRNA_E-fasciculatus_F_contig14281.3127.1 vs. uniprot

BLAST of mRNA_E-fasciculatus_F_contig14281.3127.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5L599_9PHAE	5.300e-65	82.98	4Fe-4S ferredoxin-type domain-containing protein n...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 14..33
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 34..142
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..13
None	No IPR available	TMHMM	TMhelix		coord: 40..62
None	No IPR available	TMHMM	TMhelix		coord: 15..33

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-fasciculatus_F_contig14281	contig	E-fasciculatus_F_contig14281:1014..3251 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-fasciculatus_F_contig14281.3127.1	mRNA_E-fasciculatus_F_contig14281.3127.1	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	mRNA	E-fasciculatus_F_contig14281 1014..3251 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-fasciculatus_F_contig14281.3127.1 ID=prot_E-fasciculatus_F_contig14281.3127.1|Name=mRNA_E-fasciculatus_F_contig14281.3127.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=142bp
MPVRRRPGSSAGDRALPCVGVGFSLALMLGALLRPRGAQSFVVVPGAVVG
GVIDSTAAAAVVPAAAVRSRGGVERWQRRPSVGRMGVGVVLRASMDDDDE
FDPDAWTDELRENEGKTQGGDDMGMGVSNTVKKKRRADPKYA