mRNA_E-fasciculatus_F_contig14278.3122.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig14278.3122.1
Unique NamemRNA_E-fasciculatus_F_contig14278.3122.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig14278.3122.1 vs. uniprot
Match: D7FWD5_ECTSI (PX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWD5_ECTSI)

HSP 1 Score: 672 bits (1733), Expect = 8.720e-235
Identity = 374/438 (85.39%), Postives = 376/438 (85.84%), Query Frame = 1 
Query:   43 EGGQLEVTVYSHRVVGEGYGSHTEYTVLANASLPGFARREMEVARRFSDFRWLHSCFQAIPGVLVPPLPPSKWAGSSSRDFVAERMKGLQRYMTRVAQHPILSRHYVFQVFLEGTPRGLRAAKALLPTRVPGS--GNNN--STAWGDTFSPSMAGAGGTPVSPALSSTPSTTPPDESGFVRRHFSLGGADDMYVHRVGGGGTA-MDGLGGGGAGIRQGQRRSVSFGASSDESSCNGGMGGGQGPGWTGSALSVVANVGYEAYENYVSTSVSTSLTSIKGVLGAVKTRAKSAVGLGAGPAPIAVEPDPLYEAEVARIEELVAPVAGSVKIMESAAVLKRGVGYEMSRLGHYLTQVASLEDTDSLSTGVSADEID-PAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRAGGWAKAEQVLGQRMEKLATAWLGAIDQ 1338
            EGGQLEVTVYSHRVVGEGYGSHTEYTVLANASLPGFARREMEVARRFSDFRWLHSCFQAIPGVLVPPLPPSKWAGSSSRDFVAERMKGLQRYMTRVAQHPILSRHYVFQVFLEGTPRGLRAAKALLP RVPG   GNNN  S AWGDTFSPSMAGAGGTPVSPALSSTPSTTPPDESGFVRR F+LGGADDMY           +DG       IRQGQRRSVSFGASSDES CNG  GGGQGPGWTGSALSVVANVGYEAYENYVSTSVSTSLTSIKGVLGAVKTRAKSAVGLGAGPAPIAVEPDPLYEAEVARIEELVAPVAGSVKIMESAAVLKRGVGYEMSRLGHYLTQVASLEDTDSLS GVSADEID PAAA                              GR GGWAKAEQVLGQRMEKLATAWLGAIDQ
Sbjct:  230 EGGQLEVTVYSHRVVGEGYGSHTEYTVLANASLPGFARREMEVARRFSDFRWLHSCFQAIPGVLVPPLPPSKWAGSSSRDFVAERMKGLQRYMTRVAQHPILSRHYVFQVFLEGTPRGLRAAKALLPARVPGGCGGNNNNASAAWGDTFSPSMAGAGGTPVSPALSSTPSTTPPDESGFVRRRFTLGGADDMYXXXXXXXXXXXVDGXXXXXXXIRQGQRRSVSFGASSDESLCNGAAGGGQGPGWTGSALSVVANVGYEAYENYVSTSVSTSLTSIKGVLGAVKTRAKSAVGLGAGPAPIAVEPDPLYEAEVARIEELVAPVAGSVKIMESAAVLKRGVGYEMSRLGHYLTQVASLEDTDSLSAGVSADEIDAPAAAAAAGEGEELGGGISSRHGRGG---------GRGGGWAKAEQVLGQRMEKLATAWLGAIDQ 658
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BLAST of mRNA_E-fasciculatus_F_contig14278.3122.1 vs. uniprot
Match: A0A6H5KCW0_9PHAE (PX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCW0_9PHAE)

HSP 1 Score: 572 bits (1475), Expect = 1.450e-189
Identity = 331/435 (76.09%), Postives = 335/435 (77.01%), Query Frame = 1 
Query:   46 GGQLEVTVYSHRVVGEGYGSHTEYTVLANASLPGFARREMEVARRFSDFRWLHSCFQAIPGVLVPPLPPSKWAGSSSRDFVAERMKGLQRYMTRVAQHPILSRHYVFQVFLEGTPRGLRAAKALLPTRVPGS----GNNNSTAWGDTFSPSMAGAGGTPVSPALSSTPSTTPPDESGFVRRHFSLGGADDMYVHRVGGGGTAMDGLGGGGAGIRQGQRRSVSFGASSDESSCNGGMGGGQGPGWTGSALSVVANVGYEAYENYVSTSVSTSLTSIKGVLGAVKTRAKSAVGLGAGPAPIAVEPDPLYEAEVARIEELVAPVAGSVKIMESAAVLKRGVGYEMSRLGHYLTQVASLEDTDSLSTGVSADEIDPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRAGGWAKAEQVLGQRMEKLATAWLGAIDQ 1338
            GGQLEVTVYSHRVVGEGYGSHTEYTVLANASLPGFARREMEVARRFSDFRWLHSCFQAIPGVLVPPLPPSKWAGSSSRDFVAERMKGLQRYMTRVAQHPILSRHYVFQVFLEGTPRGLRAAKALLP RVPG      NN S AWGDTFSPSMAGAGG PVSPALSSTPSTTPPDE+GFVRR F+LGGADDMY                                                                 EAYENYVSTSVSTSLTSIKGVLGAVKT+AKSAVGLGAGPAPIAVEPDPLYEAEVARIEELVAPVAGSVKIMESAAVLKRGVGYEMSRLGHYLTQVASLEDTDSLS GVSADEID  AAXXXXXXXXX                     GRAGGWAKAEQVLGQRME+LATAWLGAIDQ
Sbjct:  247 GGQLEVTVYSHRVVGEGYGSHTEYTVLANASLPGFARREMEVARRFSDFRWLHSCFQAIPGVLVPPLPPSKWAGSSSRDFVAERMKGLQRYMTRVAQHPILSRHYVFQVFLEGTPRGLRAAKALLPARVPGGCGGKNNNASAAWGDTFSPSMAGAGGMPVSPALSSTPSTTPPDEAGFVRRRFTLGGADDMY-----------------------------------------------------------------EAYENYVSTSVSTSLTSIKGVLGAVKTKAKSAVGLGAGPAPIAVEPDPLYEAEVARIEELVAPVAGSVKIMESAAVLKRGVGYEMSRLGHYLTQVASLEDTDSLSAGVSADEIDAPAAXXXXXXXXXEALGGGISSRHGRGG------GRAGGWAKAEQVLGQRMERLATAWLGAIDQ 610
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BLAST of mRNA_E-fasciculatus_F_contig14278.3122.1 vs. uniprot
Match: A0A507DH53_9FUNG (PX domain-containing protein n=2 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507DH53_9FUNG)

HSP 1 Score: 79.7 bits (195), Expect = 3.080e-12
Identity = 41/110 (37.27%), Postives = 56/110 (50.91%), Query Frame = 1 
Query:   55 LEVTVYSHRVVGEGYGSHTEYTVLANASLPGFARREMEVARRFSDFRWLHS-CFQAIPGVLVPPLPPSKWAGSSSRDFVAERMKGLQRYMTRVAQHPILSRHYVFQVFLE 381
            LE+ V     V +   SH  YTV      P F    + V RR+ DF WL S      PG+++PP+P     G    DFV  R   L+R++ R+A HPILS    F++FL+
Sbjct:  228 LEICVGDPMKVSDPLSSHIVYTVKTKTECPAFRSSNLAVVRRYRDFLWLFSQLLTKYPGIVIPPVPEKHALGRFQDDFVENRRASLERFLKRIASHPILSSEDDFRLFLQ 337
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BLAST of mRNA_E-fasciculatus_F_contig14278.3122.1 vs. uniprot
Match: A8QAA9_MALGO (PX domain-containing protein n=1 Tax=Malassezia globosa (strain ATCC MYA-4612 / CBS 7966) TaxID=425265 RepID=A8QAA9_MALGO)

HSP 1 Score: 79.7 bits (195), Expect = 3.620e-12
Identity = 42/113 (37.17%), Postives = 63/113 (55.75%), Query Frame = 1 
Query:   52 QLEVTVYSHRVVGEGYGSHTEYTVLANASLPGFARREMEVARRFSDFRWLHSCF-QAIPGVLVPPLPPSKWAGSSSRDFVAERMKGLQRYMTRVAQHPILSRHYVFQVFLEGT 387
            +  V V   + VG+   +H  YTV    + P FAR E+ V RR+SDFRWLH+      PGV+VPP+P     G  + + V  R + L+R + ++  HP+L R    ++FLE +
Sbjct:  428 EFTVRVGDPQRVGDPVTAHVVYTVRLTTNAPWFARSELSVLRRYSDFRWLHAAMVHNHPGVVVPPIPEKVKLGRFAPELVEFRRRSLERALHKILLHPMLQRDDDLKLFLESS 540
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BLAST of mRNA_E-fasciculatus_F_contig14278.3122.1 vs. uniprot
Match: A9UXR8_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UXR8_MONBE)

HSP 1 Score: 78.6 bits (192), Expect = 4.040e-12
Identity = 44/121 (36.36%), Postives = 64/121 (52.89%), Query Frame = 1 
Query:   49 GQLEVTVYSHRVVGEGYGSHTEYTVLANASLPGFARREMEVARRFSDFRWLHSCF-QAIPGVLVPPLPPS----------KWAGSSSRDFVAERMKGLQRYMTRVAQHPILSRHYVFQVFL 378
            G LE++V   + +G+G GS+  Y +    ++ GFA+   EV  R+SDF  L+    +  PG+LVPP PP           K  G     F+ +R   L+R+M R+A HPIL    VF+ FL
Sbjct:   43 GTLEISVSDPQRIGDGMGSYMVYNLNTKTTMKGFAQPSFEVQHRYSDFHALYKYLVEKYPGLLVPPPPPKSAVGTGMMKFKSQGDEVTPFIEQRQFALERFMQRIAAHPILRSDDVFKTFL 163
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BLAST of mRNA_E-fasciculatus_F_contig14278.3122.1 vs. uniprot
Match: A0A061S8W9_9CHLO (Sorting nexin-1/2 n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S8W9_9CHLO)

HSP 1 Score: 74.3 bits (181), Expect = 1.150e-10
Identity = 39/103 (37.86%), Postives = 57/103 (55.34%), Query Frame = 1 
Query:   88 GEGYGSHTEYTVLANASLPGFARREMEVARRFSDFRWLHSCFQAIP-GVLVPPLPPSKWAG--SSSRDFVAERMKGLQRYMTRVAQHPILSRHYVFQVFLEGT 387
            G+G G++  Y V     L  F   E EV RR+ DF WL    Q+   GV VP +P        S++ DF+  R +GLQ ++ +VA+HP+L  +   Q+FLEG+
Sbjct:   77 GDGVGAYVSYKVWTKTRLQQFKNSENEVIRRYKDFDWLFHRLQSTNRGVFVPAIPEKNAVSKISATTDFIEGRRRGLQSFINKVAEHPVLKYNSTLQLFLEGS 179
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BLAST of mRNA_E-fasciculatus_F_contig14278.3122.1 vs. uniprot
Match: A0A1V9ZNJ5_9STRA (PX domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZNJ5_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 2.450e-10
Identity = 46/118 (38.98%), Postives = 62/118 (52.54%), Query Frame = 1 
Query:   85 VGEGYGSHTEYTVLANASLPGFARREMEVARRFSDFRWLHSCF-QAIPGVLVPPLPPSKWAGSSSRDFVAERMKGLQRYMTRVAQHPILSRHYVFQVFLEGTPRGLRAAKALLPTRVP 435
            +G+G  ++  Y V ++   P  A    EV RRFSDF WLH+   +A PG +VPPLP        S++F+  R +GLQ+++T VA H ILS    F  FL  T   L   KA      P
Sbjct:   10 IGDGVNAYHVYPVRSSTDGPIVA----EVDRRFSDFAWLHATLLKACPGCIVPPLPAKVVGLLHSKEFLEARRQGLQKFLTNVAGHDILSSAPCFSSFLCATNIELSQLKARAKDAAP 123
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BLAST of mRNA_E-fasciculatus_F_contig14278.3122.1 vs. uniprot
Match: A0A1R1PEA7_ZANCU (Vacuolar protein sorting-associated protein vps5 n=1 Tax=Zancudomyces culisetae TaxID=1213189 RepID=A0A1R1PEA7_ZANCU)

HSP 1 Score: 71.2 bits (173), Expect = 1.720e-9
Identity = 37/113 (32.74%), Postives = 66/113 (58.41%), Query Frame = 1 
Query:   55 LEVTVYSHRVVGEGYGSHTEYTV----LANASLPGFARREMEVARRFSDFRWLHSCF-QAIPGVLVPPLPPSKWAGSSSRDFVAERMKGLQRYMTRVAQHPILSRHYVFQVFL 378
            L+++V     VG+   +HT Y V     +++++ G   +E+ V RR+ DF WL+    Q   G+ +P +P  +  G    +F+++R KGL+R++ R++QHP+L     F+VFL
Sbjct:  327 LKISVSEPIKVGDTLSAHTVYKVSTIQTSDSAMSG--AQEIVVRRRYRDFEWLYQQLSQECNGIFIPAIPEKQSFGRFETEFISKRRKGLERFLIRISQHPVLKSQESFEVFL 437
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BLAST of mRNA_E-fasciculatus_F_contig14278.3122.1 vs. uniprot
Match: A0A553NZU1_TIGCA (PX domain-containing protein n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553NZU1_TIGCA)

HSP 1 Score: 70.9 bits (172), Expect = 1.880e-9
Identity = 44/147 (29.93%), Postives = 68/147 (46.26%), Query Frame = 1 
Query:   55 LEVTVYSHRVVGEGYGSHTEYTVLANASLPGFARREMEVARRFSDFRWLHSCFQA--IP-GVLVPPLPPSKWAGSSS-----------------------------------RDFVAERMKGLQRYMTRVAQHPILSRHYVFQVFLE 381
            +E+TV+    VGEG  +   Y V+ + +LPGF   E+ V RRFSDF  +H   +   +P G ++PP P     G++                                    ++F+A R   L+R++ RVAQHP+L R  +F  FL+
Sbjct:  150 MEITVHEPHKVGEGMSAFMAYRVVTHTNLPGFNGAEVSVVRRFSDFLGVHEKLREKYLPRGRIIPPAPEKSILGTTKVKIASHNGAAGGTGSLPTGTDSPGGNGSTQSSPNQKEFIARRRFALERFINRVAQHPVLRRDMIFIEFLQ 296
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BLAST of mRNA_E-fasciculatus_F_contig14278.3122.1 vs. uniprot
Match: A0A2A4J1G6_HELVI (PX domain-containing protein (Fragment) n=1 Tax=Heliothis virescens TaxID=7102 RepID=A0A2A4J1G6_HELVI)

HSP 1 Score: 67.4 bits (163), Expect = 2.120e-9
Identity = 44/132 (33.33%), Postives = 60/132 (45.45%), Query Frame = 1 
Query:   61 VTVYSHRVVGEGYGSHTEYTVLANASLPGFARREMEVARRFSDFRWLHSCFQAI---PGVLVPPLPP----------------------SKWAGSSSRDFVAERMKGLQRYMTRVAQHPILSRHYVFQVFLE 381
            +TV   + +GEG  S+  Y VL   ++P F++ +  V RRFSDF  LH          G ++PP P                       S  AGS    FV  R   L+R++ RVAQHP+L     F+ FLE
Sbjct:   11 ITVTEPQKIGEGMSSYVAYRVLTKTNMPIFSKHDFAVLRRFSDFLGLHEKLTEKYLRSGRIIPPAPEKSIVGTTKLKMTSTPSTESANGSSAAGSVQSVFVERRRAALERFLNRVAQHPVLCIDPDFREFLE 142
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14278.3122.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWD5_ECTSI8.720e-23585.39PX domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5KCW0_9PHAE1.450e-18976.09PX domain-containing protein n=1 Tax=Ectocarpus sp... [more]
A0A507DH53_9FUNG3.080e-1237.27PX domain-containing protein n=2 Tax=Synchytrium e... [more]
A8QAA9_MALGO3.620e-1237.17PX domain-containing protein n=1 Tax=Malassezia gl... [more]
A9UXR8_MONBE4.040e-1236.36Predicted protein n=1 Tax=Monosiga brevicollis Tax... [more]
A0A061S8W9_9CHLO1.150e-1037.86Sorting nexin-1/2 n=2 Tax=Tetraselmis sp. GSL018 T... [more]
A0A1V9ZNJ5_9STRA2.450e-1038.98PX domain-containing protein n=1 Tax=Achlya hypogy... [more]
A0A1R1PEA7_ZANCU1.720e-932.74Vacuolar protein sorting-associated protein vps5 n... [more]
A0A553NZU1_TIGCA1.880e-929.93PX domain-containing protein n=1 Tax=Tigriopus cal... [more]
A0A2A4J1G6_HELVI2.120e-933.33PX domain-containing protein (Fragment) n=1 Tax=He... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14278contigE-fasciculatus_F_contig14278:18..3362 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score677.9
Seed ortholog evalue3.1e-192
Seed eggNOG ortholog2880.D7FWD5
EggNOG free text desc.phosphatidylinositol binding
EggNOG OGsCOG5391@1,KOG2527@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons6
Model size1338
Cds size1338
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14278.3122.1prot_E-fasciculatus_F_contig14278.3122.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig14278 18..3362 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927918.8061633-CDS-E-fasciculatus_F_contig14278:17..2691622927918.8061633-CDS-E-fasciculatus_F_contig14278:17..269Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14278 18..269 -
1695995750.516014-CDS-E-fasciculatus_F_contig14278:17..2691695995750.516014-CDS-E-fasciculatus_F_contig14278:17..269Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14278 18..269 -
1622927918.8189359-CDS-E-fasciculatus_F_contig14278:610..6951622927918.8189359-CDS-E-fasciculatus_F_contig14278:610..695Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14278 611..695 -
1695995750.5346942-CDS-E-fasciculatus_F_contig14278:610..6951695995750.5346942-CDS-E-fasciculatus_F_contig14278:610..695Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14278 611..695 -
1622927918.8352623-CDS-E-fasciculatus_F_contig14278:1035..12361622927918.8352623-CDS-E-fasciculatus_F_contig14278:1035..1236Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14278 1036..1236 -
1695995750.5467167-CDS-E-fasciculatus_F_contig14278:1035..12361695995750.5467167-CDS-E-fasciculatus_F_contig14278:1035..1236Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14278 1036..1236 -
1622927918.854742-CDS-E-fasciculatus_F_contig14278:1518..19491622927918.854742-CDS-E-fasciculatus_F_contig14278:1518..1949Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14278 1519..1949 -
1695995750.556491-CDS-E-fasciculatus_F_contig14278:1518..19491695995750.556491-CDS-E-fasciculatus_F_contig14278:1518..1949Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14278 1519..1949 -
1622927918.8680131-CDS-E-fasciculatus_F_contig14278:2490..26801622927918.8680131-CDS-E-fasciculatus_F_contig14278:2490..2680Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14278 2491..2680 -
1695995750.5661-CDS-E-fasciculatus_F_contig14278:2490..26801695995750.5661-CDS-E-fasciculatus_F_contig14278:2490..2680Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14278 2491..2680 -
1622927918.8781345-CDS-E-fasciculatus_F_contig14278:3183..33621622927918.8781345-CDS-E-fasciculatus_F_contig14278:3183..3362Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14278 3184..3362 -
1695995750.5747757-CDS-E-fasciculatus_F_contig14278:3183..33621695995750.5747757-CDS-E-fasciculatus_F_contig14278:3183..3362Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14278 3184..3362 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig14278.3122.1

>prot_E-fasciculatus_F_contig14278.3122.1 ID=prot_E-fasciculatus_F_contig14278.3122.1|Name=mRNA_E-fasciculatus_F_contig14278.3122.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=446bp
WEHPGGREEGGGGEEGGQLEVTVYSHRVVGEGYGSHTEYTVLANASLPGF
ARREMEVARRFSDFRWLHSCFQAIPGVLVPPLPPSKWAGSSSRDFVAERM
KGLQRYMTRVAQHPILSRHYVFQVFLEGTPRGLRAAKALLPTRVPGSGNN
NSTAWGDTFSPSMAGAGGTPVSPALSSTPSTTPPDESGFVRRHFSLGGAD
DMYVHRVGGGGTAMDGLGGGGAGIRQGQRRSVSFGASSDESSCNGGMGGG
QGPGWTGSALSVVANVGYEAYENYVSTSVSTSLTSIKGVLGAVKTRAKSA
VGLGAGPAPIAVEPDPLYEAEVARIEELVAPVAGSVKIMESAAVLKRGVG
YEMSRLGHYLTQVASLEDTDSLSTGVSADEIDPAAASAAAAAAAGEGENL
GLGGGNSSRHGRGAGGGRAGGWAKAEQVLGQRMEKLATAWLGAIDQ
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mRNA from alignment at E-fasciculatus_F_contig14278:18..3362-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig14278.3122.1 ID=mRNA_E-fasciculatus_F_contig14278.3122.1|Name=mRNA_E-fasciculatus_F_contig14278.3122.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3345bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14278:18..3362- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
TGGGAACACCCCGGGGGGCGGGAGGAGGGGGGGGGAGGCGAGGAGGGGGG
CCAGCTGGAGGTCACGGTGTACAGCCATCGAGTTGTTGGGGAAGGGTACG
GCAGCCATACCGAGTACACGGTGCTAGCGAACGCGTCCCTGCCCGGGTTC
GCGAGGAGGGAGATGGAGGTGGCGAGGAGGTGCGTGCGGGTTCTTCGTCG
TCAGGAACGACGAGTGCGCGCGTTTGTGTGTCGTGGGATTTCATTTTGAT
GCCCTGTACGCTGTTGTCAGAGGTCAGAACGGGTAGGTTGTGAAGAGGAC
GGCGCCCACAGCAGCCACAGTCATCCACCCGCCACGCGTCGCGCTGGGAA
GTCGAGCACAAGCGGGGAGGTTGTAGAGTAGGTGGGGTACGAGTTGTGGA
CGGGGGTAGGTTGGTCTCTCTTGCGGCGATGGGAAATAGCGCTCCCTCAT
CCAAGCGCATCAGGTTCACCCCCCCCCAATGACATATCTGGCTTGGCAAG
GATGGTGGCCAACTTCTGGTTAACCCTTGTGAAAATATAGCCTGGGCCGG
CGAATTCGCTCGGCCTCGGCATTTGTAGGTCCATGGTCTAGCGACTGCGA
CATGCGTTTACATTATTACACCCCCCCCGTCCCACGTACATGCACGCTTG
TCGCCCCTCGACATATTTTTTCCCCGCACCAGGTTCAGCGACTTCCGCTG
GCTGCACAGCTGCTTCCAAGCCATCCCGGGCGTATTGGTGCCGCCACTGC
CTCCATCCAAGTGGGCGGGCAGCAGCAGCCGAGACTTCGTGGCCGAGCGC
ATGAAGGGCCTGCAGCGATACATGACCAGGGTGGCCCAGCACCCCATACT
GAGCCGGCACTACGTGTTTCAGGTGCGTGTGTTTTAGCGCAACACAAGTG
CTGTAGGGGGCGTCACCGCAGGTGATTTGCAAGTCAAAGTGGCATTTAGC
CTTGAGGTGTCGCCGCCCGTGTAGATGTGTGATGTGACGTTGCTGGTGCC
GTATGACTGCTGTCTTTGGTGTGTAATTGGTAGTCGCTGGGCACCTGTTG
GCCTTGCCATCGGAGACAGGAGACAGGGACACTGCTAGTGATATTGGCCC
GTCGAAACCAAGAAGGGCAAGGAGGAAGAACATGCTTGGAGAGTGGCAAC
AACCAGGATGTTTTGTCATTGGGTTTATTTTGGTCGGGTGCGTTTTCGCC
AAACGTCACGTCAGGCTCTGCAATGAGTGACTGCACCCAGGAAGTCTTGT
AGCTGCCTCTCTGGGTTAAGGACAGCTCTCTCACGCAGTGGCGACTCAAA
CATCTTACAATGCTAACCCTTTGTACACGACCGGCTAACCCTTATGTACG
CGACCCGATGCTAACCCTTGGTACACGACCATATGGTACCCCTTTGTACA
ACGCTCCCAACAGGTGTTCCTCGAGGGAACCCCGAGAGGCCTAAGAGCCG
CCAAGGCTCTCCTACCGACCAGGGTCCCGGGCAGCGGCAACAACAACTCC
ACCGCATGGGGAGACACGTTCAGCCCGTCCATGGCGGGAGCGGGGGGCAC
ACCCGTAAGCCCAGCCCTCTCCTCTACCCCGAGCACTACCCCCCCTGACG
AATCGGGGTTCGTCAGGAGGCACTTTTCCTTGGGGGGGGCGGACGACATG
TACGTCCACAGGGTGGGGGGGGGCGGGACGGCCATGGATGGACTCGGGGG
CGGCGGTGCTGGGATCCGTCAGGGCCAGCGGAGGAGCGTGAGCTTCGGGG
CTAGCTCGGATGAGAGCTCGTGCAATGGGGGGATGGGCGGCGGGCAGGGT
CCCGGTTGGACGGGCTCTGCGCTCTCGGTCGTCGCTAACGTTGGGTGCGT
GGGGACGGTGTTCGTGATTCGTGGGGCTCACATATCCCTGTATCTCTCGG
TGGTGCTTGTAGCCCCGTGTTAGCGTGCGTGCTTGCCCTGAGGGAATCTA
GTTTCACCCACCCCAACCCTTCTCTCCCCAAACCAGCGGTCGCTACACTT
GCTTGCTTCGATTGCGTGACGGTGTCGCAGCTCATGTTTGTTACTGTTGA
CACTAAATAGTGTATGTGTTCGTCGGTTAGCTGAATTCTAAATTCCCCAC
CCCCACCCCCCACCCTGCCCGAGCAGGTACGAAGCGTACGAGAACTACGT
GTCAACGTCAGTCTCGACCTCCCTCACGTCGATCAAGGGAGTTTTAGGCG
CCGTCAAGACGAGGGCCAAGTCGGCCGTGGGGCTGGGGGCCGGGCCCGCT
CCCATCGCGGTAGAGCCGGACCCGCTGTACGAGGCCGAGGTGGCTCGTAT
CGAAGAGCTTGTGGCGCCGGTTGCCGGGTGAGCGACAGGGTCAAGGGCGT
CTGTTTTGTTGACGAGGCAGGGGGCAGCAGTATGTGCCCCAAAAAGTTCA
ATTCGATGGAGCAAATCGAAGTTGTTCGGCCTGTCAGTATGCCAAGCTCT
ATCGATCAGTGCCCCCACTGATCAAAAGCATTCAAGGTTTTGCGTCTGCT
GCGTCAATCAAAAAGGCACCGATGTTTCAGTCATACGGCGGCAGGGAACC
GCTTGTGAATCAATGCCCACACAGTGAAACTGAAGGCTTGTTTGCAACGC
ACTTGTTGTGCCAATCCTCGTCGTTTGCGGTTGTTGTTGTTTTTTGCACC
CTCTCGCCTATCATCAGGTCTGTCAAGATCATGGAATCCGCGGCCGTGCT
CAAGCGGGGTGTCGGCTACGAGATGTCTCGGCTAGGTCACTACCTAACCC
AGGTGGGTCCCGATTGCGCGGCAAGCGTTGACGGCTCAAGAGAACCTGGA
AGCAACCGACCGCAGTATAGTTGTAGTGATCAAAAGAGTTTGGGAGTTTG
ATGATGAGATGGCACAGCACCTGCCAAGACCTCATCCTGCGGGAGTTGCC
TTCGTATCGGGTGGCATGGTGGCATCATGAACCGTTGCACCAATGAGATT
TGTGCCCTGGCGCGCCTTGAACGCCGCGCTTGGTTCTAGAACCAACCCTG
GCGGAACGAACAGCTGACCTTGTGGACGTATTCCACCACACCAAACGCCG
TGAATGCCAACACTGCCGTCTACTCCTCGCCCCTTAACAACAGGTCGCCT
CTCTCGAAGACACAGATAGCCTCTCCACGGGTGTCTCCGCGGATGAGATA
GACCCCGCCGCCGCCTCCGCTGCCGCCGCCGCCGCCGCTGGGGAAGGGGA
GAACCTAGGCCTAGGCGGGGGGAACAGCTCAAGGCACGGACGCGGGGCCG
GGGGCGGCAGGGCGGGGGGCTGGGCGAAGGCCGAGCAGGTGCTGGGGCAA
CGGATGGAGAAGTTGGCGACGGCGTGGCTGGGAGCTATCGACCAG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14278:18..3362-

>mRNA_E-fasciculatus_F_contig14278.3122.1 ID=mRNA_E-fasciculatus_F_contig14278.3122.1|Name=mRNA_E-fasciculatus_F_contig14278.3122.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2676bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14278:18..3362- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
TGGGAACACCCCGGGGGGCGGGAGGAGGGGGGGGGAGGCGAGGAGGGGGG
CCAGCTGGAGGTCACGGTGTACAGCCATCGAGTTGTTGGGGAAGGGTACG
GCAGCCATACCGAGTACACGGTGCTAGCGAACGCGTCCCTGCCCGGGTTC
GCGAGGAGGGAGATGGAGGTGGCGAGGAGTGGGAACACCCCGGGGGGCGG
GAGGAGGGGGGGGGAGGCGAGGAGGGGGGCCAGCTGGAGGTCACGGTGTA
CAGCCATCGAGTTGTTGGGGAAGGGTACGGCAGCCATACCGAGTACACGG
TGCTAGCGAACGCGTCCCTGCCCGGGTTCGCGAGGAGGGAGATGGAGGTG
GCGAGGAGGTTCAGCGACTTCCGCTGGCTGCACAGCTGCTTCCAAGCCAT
CCCGGGCGTATTGGTGCCGCCACTGCCTCCATCCAAGTGGGCGGGCAGCA
GCAGCCGAGACTTCGTGGCCGAGCGCATGAAGGGCCTGCAGCGATACATG
ACCAGGGTGGCCCAGCACCCCATACTGAGCCGGCACTACGTGTTTCAGGT
TCAGCGACTTCCGCTGGCTGCACAGCTGCTTCCAAGCCATCCCGGGCGTA
TTGGTGCCGCCACTGCCTCCATCCAAGTGGGCGGGCAGCAGCAGCCGAGA
CTTCGTGGCCGAGCGCATGAAGGGCCTGCAGCGATACATGACCAGGGTGG
CCCAGCACCCCATACTGAGCCGGCACTACGTGTTTCAGGTGTTCCTCGAG
GGAACCCCGAGAGGCCTAAGAGCCGCCAAGGCTCTCCTACCGACCAGGGT
CCCGGGCAGCGGCAACAACAACTCCACCGCATGGGGAGACACGTTCAGCC
CGTCCATGGCGGGAGCGGGGGGCACACCCGTAAGCCCAGCCCTCTCCTCT
ACCCCGAGCACTACCCCCCCTGACGAATCGGGGTTCGTCAGGAGGCACTT
TTCCTTGGGGGGGGCGGACGACATGTACGTCCACAGGGTGGGGGGGGGCG
GGACGGCCATGGATGGACTCGGGGGCGGCGGTGCTGGGATCCGTCAGGGC
CAGCGGAGGAGCGTGAGCTTCGGGGCTAGCTCGGATGAGAGCTCGTGCAA
TGGGGGGATGGGCGGCGGGCAGGGTCCCGGTTGGACGGGCTCTGCGCTCT
CGGTCGTCGCTAACGTTGGGTGTTCCTCGAGGGAACCCCGAGAGGCCTAA
GAGCCGCCAAGGCTCTCCTACCGACCAGGGTCCCGGGCAGCGGCAACAAC
AACTCCACCGCATGGGGAGACACGTTCAGCCCGTCCATGGCGGGAGCGGG
GGGCACACCCGTAAGCCCAGCCCTCTCCTCTACCCCGAGCACTACCCCCC
CTGACGAATCGGGGTTCGTCAGGAGGCACTTTTCCTTGGGGGGGGCGGAC
GACATGTACGTCCACAGGGTGGGGGGGGGCGGGACGGCCATGGATGGACT
CGGGGGCGGCGGTGCTGGGATCCGTCAGGGCCAGCGGAGGAGCGTGAGCT
TCGGGGCTAGCTCGGATGAGAGCTCGTGCAATGGGGGGATGGGCGGCGGG
CAGGGTCCCGGTTGGACGGGCTCTGCGCTCTCGGTCGTCGCTAACGTTGG
GTACGAAGCGTACGAGAACTACGTGTCAACGTCAGTCTCGACCTCCCTCA
CGTCGATCAAGGGAGTTTTAGGCGCCGTCAAGACGAGGGCCAAGTCGGCC
GTGGGGCTGGGGGCCGGGCCCGCTCCCATCGCGGTAGAGCCGGACCCGCT
GTACGAGGCCGAGGTGGCTCGTATCGAAGAGCTTGTGGCGCCGGTTGCCG
GGTACGAAGCGTACGAGAACTACGTGTCAACGTCAGTCTCGACCTCCCTC
ACGTCGATCAAGGGAGTTTTAGGCGCCGTCAAGACGAGGGCCAAGTCGGC
CGTGGGGCTGGGGGCCGGGCCCGCTCCCATCGCGGTAGAGCCGGACCCGC
TGTACGAGGCCGAGGTGGCTCGTATCGAAGAGCTTGTGGCGCCGGTTGCC
GGGTCTGTCAAGATCATGGAATCCGCGGCCGTGCTCAAGCGGGGTGTCGG
CTACGAGATGTCTCGGCTAGGTCACTACCTAACCCAGGTCTGTCAAGATC
ATGGAATCCGCGGCCGTGCTCAAGCGGGGTGTCGGCTACGAGATGTCTCG
GCTAGGTCACTACCTAACCCAGGTCGCCTCTCTCGAAGACACAGATAGCC
TCTCCACGGGTGTCTCCGCGGATGAGATAGACCCCGCCGCCGCCTCCGCT
GCCGCCGCCGCCGCCGCTGGGGAAGGGGAGAACCTAGGCCTAGGCGGGGG
GAACAGCTCAAGGCACGGACGCGGGGCCGGGGGCGGCAGGGCGGGGGGCT
GGGCGAAGGCCGAGCAGGTGCTGGGGCAACGGATGGAGAAGTTGGCGACG
GCGTGGCTGGGAGCTATCGACCAGGTCGCCTCTCTCGAAGACACAGATAG
CCTCTCCACGGGTGTCTCCGCGGATGAGATAGACCCCGCCGCCGCCTCCG
CTGCCGCCGCCGCCGCCGCTGGGGAAGGGGAGAACCTAGGCCTAGGCGGG
GGGAACAGCTCAAGGCACGGACGCGGGGCCGGGGGCGGCAGGGCGGGGGG
CTGGGCGAAGGCCGAGCAGGTGCTGGGGCAACGGATGGAGAAGTTGGCGA
CGGCGTGGCTGGGAGCTATCGACCAG
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