prot_E-fasciculatus_F_contig14261.3116.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14261.3116.1
Unique Nameprot_E-fasciculatus_F_contig14261.3116.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length768
Homology
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BLAST of mRNA_E-fasciculatus_F_contig14261.3116.1 vs. uniprot
Match: A0A6H5JEA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEA0_9PHAE)

HSP 1 Score: 568 bits (1463), Expect = 2.070e-191
Identity = 300/353 (84.99%), Postives = 313/353 (88.67%), Query Frame = 0 
Query:  407 VAGTEYPESKSPLHGLLHSLQPHYLPPQNPGKPSFLSTSWGAGSPIPTRPQWSSDCCAPFRPMRQSASPGIMAQQPHPHRSSGGAHSHGGTTVATTTAEAVAPSDAATGRINSKWPADKRPDAEPTARSSPESEDIYTDLWLTGMPWATSSPPNVENLELEMPVAPAPLDALRSDDRGTRDXXXXXXXXXXXXVREATLFMHQDQAASLVQQGKEPGGGSRVGFAPQEPRVVHMSSETAVDMRTASSRDGEERAAGHVSGTQEPLPCSGAGTPANIDTIIASEKGLPLPSSVSTSKCGQRNDSSGVLEGAPGCLGGGMSIVNSKPRQMTGPQASLSELGPPRAEGAGTVTGPA 759
            +AGTE+ ESK+PLHGLLH+LQPH+LP QNPGKPS+LSTSWGAGSPIPTRPQWSSDCCAPFRPMRQSASP I AQQPHP RSSG AHSHGGT VA  TAEAVAPSDAATGRINSKWPADKRPDAEP ARSSPESEDIYTDLWLTGMPWATSSPPNVENLELEMPVAPAPLDALRSDDRG+RDXXXXXXX     VREATLFMHQ+QAASL QQGKEP GGSRVGFAPQEPRVVHMSSETAVD+RTASSR   ERAAGHVSGTQE  PC GAGTPAN +T IASEKGLPLP  VSTSKCGQR+D+SGV EG  GCLG   SIV  KPRQMTGPQA LSELGPP  +GA TV GPA
Sbjct:    1 MAGTEHAESKTPLHGLLHNLQPHHLPLQNPGKPSYLSTSWGAGSPIPTRPQWSSDCCAPFRPMRQSASPAITAQQPHPQRSSGAAHSHGGTAVAARTAEAVAPSDAATGRINSKWPADKRPDAEPMARSSPESEDIYTDLWLTGMPWATSSPPNVENLELEMPVAPAPLDALRSDDRGSRDXXXXXXXDGV--VREATLFMHQNQAASLGQQGKEPSGGSRVGFAPQEPRVVHMSSETAVDVRTASSRAEGERAAGHVSGTQEAPPCRGAGTPANTETAIASEKGLPLPLGVSTSKCGQRDDNSGVPEGGQGCLGAETSIVTRKPRQMTGPQADLSELGPPLDDGAETVPGPA 351
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BLAST of mRNA_E-fasciculatus_F_contig14261.3116.1 vs. uniprot
Match: D7G4X1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4X1_ECTSI)

HSP 1 Score: 397 bits (1021), Expect = 1.790e-126
Identity = 217/261 (83.14%), Postives = 229/261 (87.74%), Query Frame = 0 
Query:  499 VATTTAEAVAPSDAATGRINSKWPADKRPDAEPTARSSPESEDIYTDLWLTGMPWATSSPPNVENLELEMPVAPAPLDALRSDDRGTRDXXXXXXXXXXXXVREATLFMHQDQAASLVQQGKEPGGGSRVGFAPQEPRVVHMSSETAVDMRTASSRDGEERAAGHVSGTQEPLPCSGAGTPANIDTIIASEKGLPLPSSVSTSKCGQRNDSSGVLEGAPGCLGGGMSIVNSKPRQMTGPQASLSELGPPRAEGAGTVTGPA 759
            +A  TAEAVAPSDAATGRINSK PADKRPDAEPTARSSPESEDIYTDLWLTG+PWATSSPPNVENLELEMPVAPAPLDALRSDDRG+RD XXXXX      VREATLFMHQ+QAASLV QGKEP GGSRVGFAPQEP VVHMSS+TAVD+RTA+SRDG ER AGHVSGTQEP PC GA TPAN + +IASEKGLP+P SVST KCGQR+DSSGV EGAPGCLG G SIV  KP QMTGPQA LSELGPP A+GA TV GPA
Sbjct:    1 MAARTAEAVAPSDAATGRINSKCPADKRPDAEPTARSSPESEDIYTDLWLTGIPWATSSPPNVENLELEMPVAPAPLDALRSDDRGSRDDXXXXXDS----VREATLFMHQEQAASLV-QGKEPRGGSRVGFAPQEPPVVHMSSKTAVDVRTATSRDGGERVAGHVSGTQEPPPCRGACTPANTEGVIASEKGLPVPLSVSTGKCGQRDDSSGVPEGAPGCLGDGTSIVTRKPGQMTGPQAGLSELGPPLADGAETVPGPA 256
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14261.3116.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JEA0_9PHAE2.070e-19184.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G4X1_ECTSI1.790e-12683.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 78..99
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..77
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 100..768

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14261contigE-fasciculatus_F_contig14261:3..3359 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14261.3116.1mRNA_E-fasciculatus_F_contig14261.3116.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14261 3..3359 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14261.3116.1 ID=prot_E-fasciculatus_F_contig14261.3116.1|Name=mRNA_E-fasciculatus_F_contig14261.3116.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=768bp
MSSMPSTEEVPTHLEHRLPESEVPVTGVGSDAIPVAFHAQQYQTVPCIQT
CSGATMGTTTFTANQRGEWLRGMMQSSAAAAAAAAAAAAAAAAAAAAAAT
ARRRGASTAGGAPSTSEATLHFCNMHDTPVRQPIEKAHNPKAKNNRPCAG
QMGSGVLSNAVGVWTSSGIAVSESRASKVDETVDIGAQANPSGVYPVIQP
LGFRGFPTQQPPPSPPKAMALQKQLKVAEVATTTNPLPGRAHPFGAGMHY
PPHEAINSRPFSAPASMLSTPTTTQIHSPAGGVFRRPHPPAVRSRREANA
AGRSRGGSTARGLGLSKAATRAAARAAAVASVISAVADHKTNEARAAAAA
AAAATTGGTDFVKGGTGFLRKGRSKRDREGTGGGGRGGGTKQPRRPATAP
ASIKRGVAGTEYPESKSPLHGLLHSLQPHYLPPQNPGKPSFLSTSWGAGS
PIPTRPQWSSDCCAPFRPMRQSASPGIMAQQPHPHRSSGGAHSHGGTTVA
TTTAEAVAPSDAATGRINSKWPADKRPDAEPTARSSPESEDIYTDLWLTG
MPWATSSPPNVENLELEMPVAPAPLDALRSDDRGTRDDDDDDDDDGGGVV
REATLFMHQDQAASLVQQGKEPGGGSRVGFAPQEPRVVHMSSETAVDMRT
ASSRDGEERAAGHVSGTQEPLPCSGAGTPANIDTIIASEKGLPLPSSVST
SKCGQRNDSSGVLEGAPGCLGGGMSIVNSKPRQMTGPQASLSELGPPRAE
GAGTVTGPAPAPPSPPPP
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