mRNA_E-fasciculatus_F_contig14244.3106.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig14244.3106.1
Unique NamemRNA_E-fasciculatus_F_contig14244.3106.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig14244.3106.1 vs. uniprot
Match: A0A6H5KWE3_9PHAE (GCFC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWE3_9PHAE)

HSP 1 Score: 521 bits (1341), Expect = 1.770e-180
Identity = 274/278 (98.56%), Postives = 277/278 (99.64%), Query Frame = 1
Query:    1 RYITPEELLQQQEEEAKEKGEVNAPAKQIIVDMRGPQTKLVSTMDDLAPLASGTGGDGGAPKLGQELLHNVGLMVGLAETEIQTLHRRRQVEADRAKALEKDAADLRKKVDASGERLSRLEHVETILFRVHDKVLKDPASVTADNVLKAFRTLRERFPEEYAVFGLAQLVPAMAAPVIRRSLAGWSPLQAPTEPARLLASWKDVLTDTSGAVEGEGRARRWEGQAAFEFLANDLVLPAVRSALVNEWEVRDPTAALQLSEAMVLAGVGDQIVQSLLEQ 834
            RYITPEELLQQQEEEAKEKGEVNAPAKQIIVDMRGPQTKLVSTMD+LAPLASG GGDGGAPKLGQELLHNVGLMVGLAETEIQTLHRRRQVEADRAKALEKDAADLRKKVDASGERLSRLEHVETILFRVHDKVLKDPASVTADNVLKAFRTLRERFPEEYAVFGLAQLVPAMAAPV++RSLAGWSPLQAPTEPARLLASWKDVLTDTSGAVEGEGRARRWEGQAAFEFLANDLVLPAVRSALVNEWEVRDPTAALQLSEAMVLAGVGDQIVQSLLEQ
Sbjct:   44 RYITPEELLQQQEEEAKEKGEVNAPAKQIIVDMRGPQTKLVSTMDNLAPLASGVGGDGGAPKLGQELLHNVGLMVGLAETEIQTLHRRRQVEADRAKALEKDAADLRKKVDASGERLSRLEHVETILFRVHDKVLKDPASVTADNVLKAFRTLRERFPEEYAVFGLAQLVPAMAAPVLKRSLAGWSPLQAPTEPARLLASWKDVLTDTSGAVEGEGRARRWEGQAAFEFLANDLVLPAVRSALVNEWEVRDPTAALQLSEAMVLAGVGDQIVQSLLEQ 321          
BLAST of mRNA_E-fasciculatus_F_contig14244.3106.1 vs. uniprot
Match: D8LQD4_ECTSI (G-patch domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQD4_ECTSI)

HSP 1 Score: 501 bits (1290), Expect = 1.120e-167
Identity = 265/278 (95.32%), Postives = 268/278 (96.40%), Query Frame = 1
Query:    1 RYITPEELLQQQEEEAKEKGEVNAPAKQIIVDMRGPQTKLVSTMDDLAPLASGTGGDGGAPKLGQELLHNVGLMVGLAETEIQTLHRRRQVEADRAKALEKDAADLRKKVDASGERLSRLEHVETILFRVHDKVLKDPASVTADNVLKAFRTLRERFPEEYAVFGLAQLVPAMAAPVIRRSLAGWSPLQAPTEPARLLASWKDVLTDTSGAVEGEGRARRWEGQAAFEFLANDLVLPAVRSALVNEWEVRDPTAALQLSEAMVLAGVGDQIVQSLLEQ 834
            RYITP         EAKEKGEVNAPAKQIIVDMRGPQTKLVSTMDDLAPLASG GGDGGAPKLGQELLHNVGLMVGLAETEIQTLHRRR+VEADRAKALEKDAADLRKKVDASGERLSRLEHVETILFRVHDKVLKDPASVTADNVLKAFRTLRERFPEEYAVFGLAQLVPAMAAPV++RSLAGWSPLQAPTEPARLLASWKDVLTDTSGAVEGEGRARRWEGQAAFEFLANDLVLPAVRSALVNEWEVRDPTAALQLSEAMVLAGVGDQIVQSLLEQ
Sbjct:  474 RYITPXXXXXXXXXEAKEKGEVNAPAKQIIVDMRGPQTKLVSTMDDLAPLASGAGGDGGAPKLGQELLHNVGLMVGLAETEIQTLHRRRKVEADRAKALEKDAADLRKKVDASGERLSRLEHVETILFRVHDKVLKDPASVTADNVLKAFRTLRERFPEEYAVFGLAQLVPAMAAPVLKRSLAGWSPLQAPTEPARLLASWKDVLTDTSGAVEGEGRARRWEGQAAFEFLANDLVLPAVRSALVNEWEVRDPTAALQLSEAMVLAGVGDQIVQSLLEQ 751          
BLAST of mRNA_E-fasciculatus_F_contig14244.3106.1 vs. uniprot
Match: A0A7S2STN5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STN5_9STRA)

HSP 1 Score: 145 bits (366), Expect = 1.190e-35
Identity = 98/260 (37.69%), Postives = 151/260 (58.08%), Query Frame = 1
Query:   58 GEVNAPAKQIIVDMRGPQTKLVSTMDDLAPLASGTGGDGGAPK---------LGQELLHNVGLMVGLAETEIQTLHRRRQVEADRAKALEKDAADLRKKVDASGERLSRLEHVETILFRVHDKVLKDPASVTADNVLKAFRTLR-ERFPEEYAVFGLAQLVPAMAAPVIRRSLAGWSPLQAPTEPARLLASWKDVLTDTSGAVEGEGRARRWEGQAAFEFLANDLVLPAVRSALVNEWEV-RDPTAALQLSEAMVLAGVG 804
            G  +AP K ++VDMRGPQTK++S ++D+    SG G + GA +         LGQELLHN+ L V +AE++I+T  +R++ EAD+ + L  +   L ++V +   +L R   +E  L R+        A++ A+ +L+A R LR +   EE+A+FGLAQLVP + APVI  +LA W PL  PT  A +LA+W+ ++  T  A  G          AAF+ +A+ +V   V++ L+N W+V R     +QL E++  A  G
Sbjct:  319 GPGSAPPKVVVVDMRGPQTKVLSGLEDIG--TSGGGLEDGAAEEERLPRKRPLGQELLHNISLCVDIAESKIRTFDQRQRGEADQREVLRGELEALEQRVVSGKHQLDRFVDMEARLARLDSSA----ANMAAEELLEALRDLRADERAEEFAMFGLAQLVPGLMAPVIEDALADWDPLSHPTRGAAVLAAWRPLVARTHTA-HGHNATVAARSGAAFDDVADHIVARKVQTCLLNHWDVWRQVDPCIQLVESLQGANPG 571          
BLAST of mRNA_E-fasciculatus_F_contig14244.3106.1 vs. uniprot
Match: A0A218VTU0_PUNGR (septin and tuftelin-interacting protein 1 homolog 1 n=1 Tax=Punica granatum TaxID=22663 RepID=A0A218VTU0_PUNGR)

HSP 1 Score: 128 bits (321), Expect = 1.130e-29
Identity = 84/259 (32.43%), Postives = 140/259 (54.05%), Query Frame = 1
Query:    4 YITPEELLQQQEEEAKEKGEVNAPAKQIIVDMRGPQTKLVSTMDDLAPLASGTGGDGGAPKLGQELLHNVGLMVGLAETEIQTLHRRRQVEADRAKALEKDAADLRKKVDASGERLSRLEHVETILFRVHDKVLKDPASVTADNVLKAFRTLRERFPEEYAVFGLAQLVPAMAAPVIRRSLAGWSPLQAPTEPARLLASWKDVLTDTSGAVEGEGRARRWEGQAAFEFLANDLVLPAVRSALVNEWEVRDPTAALQLSE 780
            Y+T EELL +++E+  E         Q ++DMRGPQ ++++ +DDL         D   P    EL HNV L+V LAE +IQ + +  + E + A +L+K+   L+ +V+   ++L  ++ +  +L ++ +   K   ++T D++ + F  L+ RFPEEY +F L+ +  + A P+  R   GW PLQ P+    L++ WK +L       +GE     W+    +  L  ++VLPAVR + +N WE RDP   L+  E
Sbjct:  273 YVTVEELLAKKQEQGVE-------VVQKVLDMRGPQVRVLANLDDLNAEEKARESDVPMP----ELQHNVKLIVDLAELDIQKIDQDLRNEKETALSLQKEKEKLQDEVERQMKQLDAVDEIAALLGQLEEA--KTVGTLTLDSLAECFSDLQRRFPEEYKIFNLSCIACSHALPLFIRMFQGWDPLQNPSHGLELVSVWKTLL-------QGEESLDIWDVGTPYTQLMAEVVLPAVRISGINTWEPRDPEPMLRFLE 511          
BLAST of mRNA_E-fasciculatus_F_contig14244.3106.1 vs. uniprot
Match: A0A2I0IXI6_PUNGR (G-patch domain-containing protein (Fragment) n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0IXI6_PUNGR)

HSP 1 Score: 128 bits (321), Expect = 1.250e-29
Identity = 84/259 (32.43%), Postives = 140/259 (54.05%), Query Frame = 1
Query:    4 YITPEELLQQQEEEAKEKGEVNAPAKQIIVDMRGPQTKLVSTMDDLAPLASGTGGDGGAPKLGQELLHNVGLMVGLAETEIQTLHRRRQVEADRAKALEKDAADLRKKVDASGERLSRLEHVETILFRVHDKVLKDPASVTADNVLKAFRTLRERFPEEYAVFGLAQLVPAMAAPVIRRSLAGWSPLQAPTEPARLLASWKDVLTDTSGAVEGEGRARRWEGQAAFEFLANDLVLPAVRSALVNEWEVRDPTAALQLSE 780
            Y+T EELL +++E+  E         Q ++DMRGPQ ++++ +DDL         D   P    EL HNV L+V LAE +IQ + +  + E + A +L+K+   L+ +V+   ++L  ++ +  +L ++ +   K   ++T D++ + F  L+ RFPEEY +F L+ +  + A P+  R   GW PLQ P+    L++ WK +L       +GE     W+    +  L  ++VLPAVR + +N WE RDP   L+  E
Sbjct:  273 YVTVEELLAKKQEQGVE-------VVQKVLDMRGPQVRVLANLDDLNAEEKARESDVPMP----ELQHNVKLIVDLAELDIQKIDQDLRNEKETALSLQKEKEKLQDEVERQMKQLDAVDEIAALLGQLEEA--KTVGTLTLDSLAECFSDLQRRFPEEYKIFNLSCIACSHALPLFIRMFQGWDPLQNPSHGLELVSVWKTLL-------QGEESLDIWDVGTPYTQLMAEVVLPAVRISGINTWEPRDPEPMLRFLE 511          
BLAST of mRNA_E-fasciculatus_F_contig14244.3106.1 vs. uniprot
Match: A0A7S2DKD0_9STRA (Hypothetical protein (Fragment) n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DKD0_9STRA)

HSP 1 Score: 124 bits (312), Expect = 5.220e-29
Identity = 87/285 (30.53%), Postives = 149/285 (52.28%), Query Frame = 1
Query:    1 RYITPEELLQQQ-----EEEAKEKGEVNAPAKQIIVDMRGPQTKLVSTMDDLAPLASGTGGDGGAPKLGQELLHNVGLMVGLAETEIQTLHRRRQVEADRAKALEKDAADLRKKVDASGERLSRLEHVETILFRVHDKVLKDPASVTADNVLKAFRTLRER-FPEEYAVFGLAQLVPAMAAPVIRRSLAGWSPLQAPTEPARLLASWK----DVLTDTSGAVEGEGRARRWEGQAAFEFLANDLVLPAVRSALVNEWEVRDPTAALQL-----SEAMVLAGVGDQ 810
            RY++ E++L+ +     +++A E+ +       ++VDMRGP+TK++S+++D+    +G GG G    LGQELLHN+ L V LA   I T   +R+    +   +  D   L +K+     +LSR   VE IL R+        +S +   V    + L  R F EEYA+FGL+++   +  P+++R +  W PL+ P    +L+  WK    + +++ S      G A R   Q A++ +A  +V+  +++ L N+W+V D   AL L      E  V++ V D+
Sbjct:  178 RYVSVEQVLKGEGGPLRDQDATEQQQQQVARPMVVVDMRGPETKVLSSLEDITE--AGEGGAGTGVLLGQELLHNLDLQVDLARDRILTTDAKRKSAMTQRDLMNTDLKALEEKLSVGESQLSRFREVEAILSRLQS----GQSSTSESEVRGVLQRLNSREFAEEYALFGLSRVAVQLTGPILQREMERWDPLRDPLRGVQLVVDWKLLAQEQISNHSDNHHQSG-ALRSSNQKAYDEMAEQVVMRRIQACLTNDWDVLDSGPALALIRSLTGEGRVISVVSDK 455          
BLAST of mRNA_E-fasciculatus_F_contig14244.3106.1 vs. uniprot
Match: A0A067L644_JATCU (G-patch domain-containing protein n=1 Tax=Jatropha curcas TaxID=180498 RepID=A0A067L644_JATCU)

HSP 1 Score: 126 bits (316), Expect = 5.290e-29
Identity = 88/276 (31.88%), Postives = 146/276 (52.90%), Query Frame = 1
Query:    4 YITPEELLQQQEEEAKEKGEVNAPAKQIIVDMRGPQTKLVSTMDDLAPLASGTGGDGGAPKLGQELLHNVGLMVGLAETEIQTLHRRRQVEADRAKALEKDAADLRKKVDASGERLSRLEHVETILFRVHDKVLKDPASVTADNVLKAFRTLRERFPEEYAVFGLAQLVPAMAAPVIRRSLAGWSPLQAPTEPARLLASWKDVLTDTSGAVEGEGRARRWEGQAAFEFLANDLVLPAVRSALVNEWEVRDPTAALQLSEAMVLAGVGDQIVQSLLE 831
            YIT EELL ++EE+  E         Q ++DMRGPQ ++++ +++L         D   P    EL HNV L+V LAE +IQ + R  + E + A +L+K+   L  +     ++L  +E +  +L  + ++  K   ++T D + K F  LR +F +EY +  L+ +  ++A P+  R   GW PL+ P     L+ASWK+VL       +GE     W+    +  L ++++LPAVR + +N WE RDP   L+  E+      G  ++QS+L+
Sbjct:  294 YITAEELLAKKEEQGFE-------VVQKVLDMRGPQVRVLTNLENLNAEEKARENDIPMP----ELQHNVRLIVDLAELDIQKIDRDLRNERETAISLQKEKEKLEMEAADQKKQLDNVEEIMVVLSHIEEQ--KSSGTLTLDFLSKCFADLRRKFADEYKLCNLSCIACSLALPLFIRVFQGWDPLKNPLHGLELVASWKNVL-------QGEESYDIWDVATPYTQLVSEVILPAVRISGINTWEPRDPEPMLRFLESWEKLLPGS-VIQSILD 548          
BLAST of mRNA_E-fasciculatus_F_contig14244.3106.1 vs. uniprot
Match: A0A2P6VEB5_9CHLO (Septin and tuftelin-interacting 1-like protein 1 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VEB5_9CHLO)

HSP 1 Score: 120 bits (301), Expect = 5.980e-27
Identity = 90/265 (33.96%), Postives = 137/265 (51.70%), Query Frame = 1
Query:    4 YITPEELLQQQEEEAKEKGEVNAPAKQIIVDMRGPQTKLVSTMDDLAPLASGTGGDGGAPKLGQELLHNVGLMVGLAETEIQTLHRRRQVEADRAKALEKDAADLRKKVDASGERLSRLEHVETILFRVHDKVLKDPASVTADNVLKAFRTLRERFPEEYAVFGLAQLVPAMAAPVIRRSLAGWSPLQAPTEPARLLASWKDVLTDTSGAVEGE-----GRARRWEGQAAFEFLANDLVLPAVRSALVNEWEVRDPTAALQLSEA 783
            + T +E+L++ EE+        A  +Q I+DMRGPQ +LV+ ++ L        GDGG+  +  EL HN+ L+V LAE +IQ L  R + E D A  L K+   L ++ +A      RLE V   + R  +  L      +   +  A+R LR ++ EEY ++ L  L  A   P +   +AGWSPL++P  P    ASW+ +L ++ GA +G      G A   +G   +  L  +LVLP +R AL+N W+ RD     +  EA
Sbjct:  371 FKTADEVLKESEEKPV------AVERQTIIDMRGPQARLVTNLEHLN--VEEDRGDGGSVPM-PELQHNMRLLVDLAENDIQKLDARIRHEKDTAVILGKERERLEEEAEAXXXXARRLEDVVQAVQRAQELPL------SLGELEAAYRQLRGQYREEYVMYNLGALALAQVLPRLGHMMAGWSPLESPGVPVAEFASWRPLL-ESEGAAQGSVLAGGGAAELADGSDPYLRLVAELVLPPLRKALINVWDPRDAARLERFVEA 619          
BLAST of mRNA_E-fasciculatus_F_contig14244.3106.1 vs. uniprot
Match: B9I6T9_POPTR (G-patch domain-containing protein n=9 Tax=Saliceae TaxID=238069 RepID=B9I6T9_POPTR)

HSP 1 Score: 120 bits (300), Expect = 7.000e-27
Identity = 84/279 (30.11%), Postives = 144/279 (51.61%), Query Frame = 1
Query:    1 RYITPEELLQQQEEEAKEKGEVNAPAKQIIVDMRGPQTKLVSTMDDLAPLASGTGGDGGAPKLGQELLHNVGLMVGLAETEIQTLHRRRQVEADRAKALEKDAADLRKKVDASGERLSRLEHVETILFRVHDKVLKDPASVTADNVLKAFRTLRERFPEEYAVFGLAQLVPAMAAPVIRRSLAGWSPLQAPTEPARLLASWKDVLTDTSGAVEGEGRARRWEGQAAFEFLANDLVLPAVRSALVNEWEVRDPTAALQLSE-------AMVLAGVGDQIV 816
            +YIT +ELL ++EE+  E         Q ++DMRGPQ ++++ +++L         D   P    EL HNV L+V LAE +IQ + R  + E + A +L+++   L  +     ++L  +E +  +L  + ++  K   ++T D++ K F  ++ +F E+Y +  L+ +  + A P+  R   GW PL+ P     ++  WK+VL       +GE  +  W+  A +  L  ++VLPAVR + +N WE RDP   L+  E       A V+  + D IV
Sbjct:  287 KYITADELLAKKEEQGFE-------VFQKVIDMRGPQVRVLTNLENLNAEEKAKENDVAMP----ELQHNVRLIVDLAELDIQKIDRDLRNERETAMSLQQEKEKLETEAARQKKQLDNVEEIMGVLSHIEEQ--KSSGTLTLDSLAKYFTDIKRKFAEDYKLCNLSCVACSYALPLFIRVFQGWDPLRNPLHGLEVVELWKNVL-------QGEESSDIWDEVAPYAQLVTEVVLPAVRISGINTWEPRDPEPMLRFLESWENLLPAAVVQSILDNIV 545          
BLAST of mRNA_E-fasciculatus_F_contig14244.3106.1 vs. uniprot
Match: A0A835J5K0_9ROSI (G-patch domain-containing protein n=3 Tax=Saliceae TaxID=238069 RepID=A0A835J5K0_9ROSI)

HSP 1 Score: 119 bits (298), Expect = 1.280e-26
Identity = 81/279 (29.03%), Postives = 143/279 (51.25%), Query Frame = 1
Query:    1 RYITPEELLQQQEEEAKEKGEVNAPAKQIIVDMRGPQTKLVSTMDDLAPLASGTGGDGGAPKLGQELLHNVGLMVGLAETEIQTLHRRRQVEADRAKALEKDAADLRKKVDASGERLSRLEHVETILFRVHDKVLKDPASVTADNVLKAFRTLRERFPEEYAVFGLAQLVPAMAAPVIRRSLAGWSPLQAPTEPARLLASWKDVLTDTSGAVEGEGRARRWEGQAAFEFLANDLVLPAVRSALVNEWEVRDPTAALQLSE-------AMVLAGVGDQIV 816
            +YIT EELL  +EE+  +         Q ++DMRGPQ ++++ +++L         D   P    EL +NV L+V LAE +IQ + R  + E + A +L ++   L  +     ++L  +E +  ++  + ++  K   ++T D++ K F  ++ +F ++Y +  L+ +  + A P+  R   GW PL+ P      L SWK +L       +GE  +  W+    +E L +++VLPAVR +++N WE RDP   ++  E       A V+  + D IV
Sbjct:  279 KYITAEELLANKEEQGSQ-------VFQKVIDMRGPQVRVLTNLENLNAEEKDKENDVPMP----ELQYNVRLIVDLAELDIQKIDRDLRNERETAISLHREKEKLETEAARQKKQLDNMEEIMGVVSHIEEQ--KSSGTLTLDSLAKYFTDIKRKFTDDYKLCNLSCIACSYALPLFIRVFQGWDPLRNPLHGLEALESWKSIL-------QGEESSDIWDESTPYEQLVSEVVLPAVRISVINTWEPRDPEPMVRFLESWENLFPASVVPSILDNIV 537          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14244.3106.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KWE3_9PHAE1.770e-18098.56GCFC domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LQD4_ECTSI1.120e-16795.32G-patch domain-containing protein n=1 Tax=Ectocarp... [more]
A0A7S2STN5_9STRA1.190e-3537.69Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A218VTU0_PUNGR1.130e-2932.43septin and tuftelin-interacting protein 1 homolog ... [more]
A0A2I0IXI6_PUNGR1.250e-2932.43G-patch domain-containing protein (Fragment) n=1 T... [more]
A0A7S2DKD0_9STRA5.220e-2930.53Hypothetical protein (Fragment) n=2 Tax=Dictyocha ... [more]
A0A067L644_JATCU5.290e-2931.88G-patch domain-containing protein n=1 Tax=Jatropha... [more]
A0A2P6VEB5_9CHLO5.980e-2733.96Septin and tuftelin-interacting 1-like protein 1 n... [more]
B9I6T9_POPTR7.000e-2730.11G-patch domain-containing protein n=9 Tax=Saliceae... [more]
A0A835J5K0_9ROSI1.280e-2629.03G-patch domain-containing protein n=3 Tax=Saliceae... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14244contigE-fasciculatus_F_contig14244:937..3148 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score503.8
Seed ortholog evalue5e-140
Seed eggNOG ortholog2880.D8LQD4
Preferred nameTFIP11
KEGG koko:K13103
GOsGO:0000228,GO:0000375,GO:0000377,GO:0000390,GO:0000398,GO:0000723,GO:0000781,GO:0000784,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0005694,GO:0005730,GO:0005737,GO:0006139,GO:0006259,GO:0006282,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008150,GO:0008152,GO:0008380,GO:0009892,GO:0009987,GO:0010467,GO:0010605,GO:0016043,GO:0016070,GO:0016071,GO:0016233,GO:0016604,GO:0016607,GO:0019219,GO:0019222,GO:0022411,GO:0030154,GO:0030198,GO:0031012,GO:0031323,GO:0031324,GO:0031333,GO:0031848,GO:0031974,GO:0031981,GO:0032091,GO:0032200,GO:0032502,GO:0032984,GO:0032988,GO:0032991,GO:0033554,GO:0034641,GO:0042592,GO:0042752,GO:0043021,GO:0043062,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043247,GO:0043254,GO:0043393,GO:0043933,GO:0044087,GO:0044092,GO:0044237,GO:0044238,GO:0044260,GO:0044421,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044877,GO:0045738,GO:0045934,GO:0046483,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051098,GO:0051100,GO:0051105,GO:0051107,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051276,GO:0051340,GO:0051352,GO:0051716,GO:0060249,GO:0060255,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070990,GO:0071008,GO:0071013,GO:0071014,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0098687,GO:1901360,GO:1902494,GO:1904875,GO:1904876,GO:1990446,GO:1990904,GO:2000779,GO:2000780,GO:2001020,GO:2001021,GO:2001032,GO:2001033
EggNOG free text desc.spliceosomal complex disassembly
EggNOG OGsKOG2184@1,KOG2184@2759
COG Functional cat.A
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03041
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-10_005200.1
Exons4
Model size834
Cds size834
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14244.3106.1prot_E-fasciculatus_F_contig14244.3106.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig14244 937..3148 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927916.9799402-CDS-E-fasciculatus_F_contig14244:936..10981622927916.9799402-CDS-E-fasciculatus_F_contig14244:936..1098Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14244 937..1098 -
1695995749.8113265-CDS-E-fasciculatus_F_contig14244:936..10981695995749.8113265-CDS-E-fasciculatus_F_contig14244:936..1098Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14244 937..1098 -
1622927916.998699-CDS-E-fasciculatus_F_contig14244:1481..17091622927916.998699-CDS-E-fasciculatus_F_contig14244:1481..1709Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14244 1482..1709 -
1695995749.8247793-CDS-E-fasciculatus_F_contig14244:1481..17091695995749.8247793-CDS-E-fasciculatus_F_contig14244:1481..1709Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14244 1482..1709 -
1622927917.044262-CDS-E-fasciculatus_F_contig14244:2427..26221622927917.044262-CDS-E-fasciculatus_F_contig14244:2427..2622Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14244 2428..2622 -
1695995749.8350282-CDS-E-fasciculatus_F_contig14244:2427..26221695995749.8350282-CDS-E-fasciculatus_F_contig14244:2427..2622Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14244 2428..2622 -
1622927917.0587866-CDS-E-fasciculatus_F_contig14244:2899..31481622927917.0587866-CDS-E-fasciculatus_F_contig14244:2899..3148Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14244 2900..3148 -
1695995749.8452325-CDS-E-fasciculatus_F_contig14244:2899..31481695995749.8452325-CDS-E-fasciculatus_F_contig14244:2899..3148Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14244 2900..3148 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig14244.3106.1

>prot_E-fasciculatus_F_contig14244.3106.1 ID=prot_E-fasciculatus_F_contig14244.3106.1|Name=mRNA_E-fasciculatus_F_contig14244.3106.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=278bp
RYITPEELLQQQEEEAKEKGEVNAPAKQIIVDMRGPQTKLVSTMDDLAPL
ASGTGGDGGAPKLGQELLHNVGLMVGLAETEIQTLHRRRQVEADRAKALE
KDAADLRKKVDASGERLSRLEHVETILFRVHDKVLKDPASVTADNVLKAF
RTLRERFPEEYAVFGLAQLVPAMAAPVIRRSLAGWSPLQAPTEPARLLAS
WKDVLTDTSGAVEGEGRARRWEGQAAFEFLANDLVLPAVRSALVNEWEVR
DPTAALQLSEAMVLAGVGDQIVQSLLEQ
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mRNA from alignment at E-fasciculatus_F_contig14244:937..3148-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig14244.3106.1 ID=mRNA_E-fasciculatus_F_contig14244.3106.1|Name=mRNA_E-fasciculatus_F_contig14244.3106.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2212bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14244:937..3148- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AGGTACATCACTCCGGAAGAACTCCTCCAGCAGCAGGAGGAGGAAGCGAA GGAGAAGGGGGAGGTCAACGCGCCCGCCAAGCAGATCATCGTCGACATGC GCGGCCCGCAGACCAAGCTCGTGAGCACCATGGACGACCTGGCGCCGCTG GCTTCGGGAACGGGAGGCGACGGCGGTGCTCCGAAGCTTGGCCAGGAGCT GCTGCATAATGTCGGCCTGATGGTGGGGCTGGCGGAAACAGAGATACAGG TGAAGTGAAGATGGTGTTTGTTAGCATGGTTGTACGTATTTGGTGCTCGG TTTCTTTTGGGGTTGTCGCTGATGTTTTTGTTGTTGTGGTTGTCGTCGCT GTTGTTGTTGACGCGGAAGGCAGCGTGTAAATGGGATAGTCCTTTACTAG TCGATAATGGCAGTTTCCTCTGTCGTTTCTCGACGGTTTTCATGCAACGC CATACAACTCACCTGCTTTCTGCTGCACCTATGCCCCCCCCTCCGCCATG TTCTCCTATCTCTTGTGCCCCTCTAGACGTTACACCGAAGGAGGCAGGTG GAGGCGGACAGAGCCAAGGCCCTCGAGAAGGACGCCGCGGATCTGAGGAA GAAGGTCGACGCCTCGGGGGAGAGGCTATCCCGCCTGGAGCACGTGGAGA CCATCCTGTTCCGGGTGCACGACAAGGTGCTCAAGGACCCAGCCTCGGTG ACCGCGGACAACGTGCTCAAGGTGATGGTGATGATTATTCTCCCTCGGTC AGGCCATCGATGGGCTGTTTTCCTTTCCTTTGCCGGTTGCTGGCGTGCAT TTTACTGTTTGATTGTGTTCCTTGTAATATTTAGTCGACCAGCGTTGCTC AAGGTGATGATGATGATCGATCCTCGCTCGCCAGTCTCACCGCGCTCGCG TGTCTTTTTATACAATTGGCGTCGACCGCGCTAGACGGCTGATCAATAAG AAAACACGATCAGCGTGTGCATGTTGTATGTGCGTGTTTTTTTTTTCCTG CCCGATGGGTGTTGGAATCCTCACCCACGAGGTGTTTTCCCGTCGACACG GGGATCGTTTCAGTGAGAGGCACTATTAACATTGTGTTCTCCATCTCGCT TGTACACACCGCCATTGGAGACCTGGCGTTGGCGTCGTGTGGTTGTGCAT AGTGCGTCTCTGTCGCTCTCTCAGCATCGACCGTGCCTTGCTGGCTCCTA AGTGCGCGTGTGTGTTCGCCTTGGGGGCGGCCGAAATACGGCAAGCGGGG GGGTGCCTGGTCATGGTTAAACATGAGATACTTTTGGTGTGTTTTTCATG TCTTGTTTCTGTCGGGGTGGTGGTGCGGGTGTACATGTGTTGCGCAATGC GGTATGTATGCACAAAACTACGAGCTGGCGCATTCAAGCACCATCGTGGC TCACGTATGCCCTGCTGTACGTGGAACCCACGTATGCAGGCGTTCCGGAC GTTACGGGAGCGTTTTCCCGAGGAGTACGCCGTGTTCGGCCTCGCCCAGC TCGTGCCTGCCATGGCCGCCCCCGTCATCAGGAGGTCCCTCGCAGGATGG AGCCCGCTACAGGCGCCCACCGAGCCGGCGCGGCTGCTGGCCTCCTGGAA GGATGTTCTCACGGACACCTCCGGTGCGGTGGAGGGGGAGGGGAGGGCGA GGCGCTGGGAAGGCCAGGTGGGTGTGGGCGCTGGTGCTGAGAGCTTGGTC AGTTTTGGTATCACTGTTGGTGGTGGTGGTGGTGGTGGTGGTGGTCCTGC TGCTGCTGCTGCTGCTGCCGTTGTTGTTGAGGCAGTTGCTGGGCGGTAGA GGTAGCAGCGCTGGTGGTTCCTTGTTTCTATTCATGTCCCCGTGTCACCA CGTGCCTTGCCATCTGGATTCGATGGTGTCGAAAATGTCGATGATGGTGC GACCCGCAGCATTCGCAATATAATGTTGTGGTGATGTCGACCTTGATGTT GGTGAGACTCACAGCGTTATCAATGACTCACATCGTTAACAGTGGAATTG CTGCTGCTGCTGCTTGTTGTTTTTCTATGATGAATACATATATACGACAG GCGGCCTTCGAGTTCTTGGCAAACGACCTCGTGCTGCCTGCGGTGAGGTC AGCGCTCGTCAACGAGTGGGAAGTGAGGGATCCCACGGCGGCCTTGCAGT TGTCCGAGGCGATGGTGTTAGCCGGCGTCGGCGACCAGATCGTGCAGTCC TTGCTGGAGCAG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14244:937..3148-

>mRNA_E-fasciculatus_F_contig14244.3106.1 ID=mRNA_E-fasciculatus_F_contig14244.3106.1|Name=mRNA_E-fasciculatus_F_contig14244.3106.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1668bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14244:937..3148- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AGGTACATCACTCCGGAAGAACTCCTCCAGCAGCAGGAGGAGGAAGCGAA
GGAGAAGGGGGAGGTCAACGCGCCCGCCAAGCAGATCATCGTCGACATGC
GCGGCCCGCAGACCAAGCTCGTGAGCACCATGGACGACCTGGCGCCGCTG
GCTTCGGGAACGGGAGGCGACGGCGGTGCTCCGAAGCTTGGCCAGGAGCT
GCTGCATAATGTCGGCCTGATGGTGGGGCTGGCGGAAACAGAGATACAGA
GGTACATCACTCCGGAAGAACTCCTCCAGCAGCAGGAGGAGGAAGCGAAG
GAGAAGGGGGAGGTCAACGCGCCCGCCAAGCAGATCATCGTCGACATGCG
CGGCCCGCAGACCAAGCTCGTGAGCACCATGGACGACCTGGCGCCGCTGG
CTTCGGGAACGGGAGGCGACGGCGGTGCTCCGAAGCTTGGCCAGGAGCTG
CTGCATAATGTCGGCCTGATGGTGGGGCTGGCGGAAACAGAGATACAGAC
GTTACACCGAAGGAGGCAGGTGGAGGCGGACAGAGCCAAGGCCCTCGAGA
AGGACGCCGCGGATCTGAGGAAGAAGGTCGACGCCTCGGGGGAGAGGCTA
TCCCGCCTGGAGCACGTGGAGACCATCCTGTTCCGGGTGCACGACAAGGT
GCTCAAGGACCCAGCCTCGGTGACCGCGGACAACGTGCTCAAGACGTTAC
ACCGAAGGAGGCAGGTGGAGGCGGACAGAGCCAAGGCCCTCGAGAAGGAC
GCCGCGGATCTGAGGAAGAAGGTCGACGCCTCGGGGGAGAGGCTATCCCG
CCTGGAGCACGTGGAGACCATCCTGTTCCGGGTGCACGACAAGGTGCTCA
AGGACCCAGCCTCGGTGACCGCGGACAACGTGCTCAAGGCGTTCCGGACG
TTACGGGAGCGTTTTCCCGAGGAGTACGCCGTGTTCGGCCTCGCCCAGCT
CGTGCCTGCCATGGCCGCCCCCGTCATCAGGAGGTCCCTCGCAGGATGGA
GCCCGCTACAGGCGCCCACCGAGCCGGCGCGGCTGCTGGCCTCCTGGAAG
GATGTTCTCACGGACACCTCCGGTGCGGTGGAGGGGGAGGGGAGGGCGAG
GCGCTGGGAAGGCCAGGCGTTCCGGACGTTACGGGAGCGTTTTCCCGAGG
AGTACGCCGTGTTCGGCCTCGCCCAGCTCGTGCCTGCCATGGCCGCCCCC
GTCATCAGGAGGTCCCTCGCAGGATGGAGCCCGCTACAGGCGCCCACCGA
GCCGGCGCGGCTGCTGGCCTCCTGGAAGGATGTTCTCACGGACACCTCCG
GTGCGGTGGAGGGGGAGGGGAGGGCGAGGCGCTGGGAAGGCCAGGCGGCC
TTCGAGTTCTTGGCAAACGACCTCGTGCTGCCTGCGGTGAGGTCAGCGCT
CGTCAACGAGTGGGAAGTGAGGGATCCCACGGCGGCCTTGCAGTTGTCCG
AGGCGATGGTGTTAGCCGGCGTCGGCGACCAGATCGTGCAGTCCTTGCTG
GAGCAGGCGGCCTTCGAGTTCTTGGCAAACGACCTCGTGCTGCCTGCGGT
GAGGTCAGCGCTCGTCAACGAGTGGGAAGTGAGGGATCCCACGGCGGCCT
TGCAGTTGTCCGAGGCGATGGTGTTAGCCGGCGTCGGCGACCAGATCGTG
CAGTCCTTGCTGGAGCAG
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