prot_E-fasciculatus_F_contig14239.3102.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14239.3102.1
Unique Nameprot_E-fasciculatus_F_contig14239.3102.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length86
Homology
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BLAST of mRNA_E-fasciculatus_F_contig14239.3102.1 vs. uniprot
Match: A0A6H5JKL9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKL9_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 3.020e-37
Identity = 78/82 (95.12%), Postives = 80/82 (97.56%), Query Frame = 0 
Query:    1 MPMLPPGLSVSIVVDLAAVSIALTEAGVNVAAVALSAAHCKVNAENVRVKTVISLGDLYVLNLLQPPPLRSSALSFAGEGGR 82
            MPMLPPGLSVSIVVDLAAVS+ALTEAGVNVAAVALSAAHCKVNAENVRVK VISLGDLYVLNLL+PPPLRS ALSFAGEGGR
Sbjct:  734 MPMLPPGLSVSIVVDLAAVSVALTEAGVNVAAVALSAAHCKVNAENVRVKAVISLGDLYVLNLLRPPPLRSPALSFAGEGGR 815
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BLAST of mRNA_E-fasciculatus_F_contig14239.3102.1 vs. uniprot
Match: D8LP20_ECTSI (Vacuolar protein sorting-associated protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP20_ECTSI)

HSP 1 Score: 73.6 bits (179), Expect = 2.490e-13
Identity = 41/43 (95.35%), Postives = 43/43 (100.00%), Query Frame = 0 
Query:    1 MPMLPPGLSVSIVVDLAAVSIALTEAGVNVAAVALSAAHCKVN 43
            MPMLPPG+SVSIVVDLAAVS+ALTEAGVNVAAVALSAAHCKVN
Sbjct: 2045 MPMLPPGMSVSIVVDLAAVSVALTEAGVNVAAVALSAAHCKVN 2087
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14239.3102.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JKL9_9PHAE3.020e-3795.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LP20_ECTSI2.490e-1395.35Vacuolar protein sorting-associated protein, putat... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..36
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..36
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 37..86
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..26
score: 0.516

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14239contigE-fasciculatus_F_contig14239:2242..2898 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14239.3102.1mRNA_E-fasciculatus_F_contig14239.3102.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14239 2242..2927 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14239.3102.1 ID=prot_E-fasciculatus_F_contig14239.3102.1|Name=mRNA_E-fasciculatus_F_contig14239.3102.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=86bp
MPMLPPGLSVSIVVDLAAVSIALTEAGVNVAAVALSAAHCKVNAENVRVK
TVISLGDLYVLNLLQPPPLRSSALSFAGEGGRRGGG
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