prot_E-fasciculatus_F_contig14235.3099.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14235.3099.1
Unique Nameprot_E-fasciculatus_F_contig14235.3099.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length90
Homology
BLAST of mRNA_E-fasciculatus_F_contig14235.3099.1 vs. uniprot
Match: A0A6H5JBW8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBW8_9PHAE)

HSP 1 Score: 143 bits (360), Expect = 5.280e-42
Identity = 74/75 (98.67%), Postives = 75/75 (100.00%), Query Frame = 0
Query:   16 MKLVASCGIGYYFSKKGILDQSAITSLSKLIFFVFQPCLLFVNVASTLGTPGQKLSKLLVLPVFAVLQIVFGSAV 90
            MKLVASCGIGYYFSKKGILDQSAITSLSKLIFFVFQPCLLFVNVASTLGTPGQKLSKLLVLPVFAVLQI+FGSAV
Sbjct:    1 MKLVASCGIGYYFSKKGILDQSAITSLSKLIFFVFQPCLLFVNVASTLGTPGQKLSKLLVLPVFAVLQILFGSAV 75          
BLAST of mRNA_E-fasciculatus_F_contig14235.3099.1 vs. uniprot
Match: D8LM61_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM61_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 9.740e-20
Identity = 56/89 (62.92%), Postives = 57/89 (64.04%), Query Frame = 0
Query:    2 SVQPAILVLATKAVMKLVASCGIGYYFSKKGILDQSAITSLSKLIFFVFQPCLLFVNVASTLGTPGQKLSKLLVLPVFAVLQIVFGSAV 90
            SVQPAILVLATKAVMKLVASCGIGYYFSKKGILDQ                                KLSKLLVLPVFAVLQI+FGSAV
Sbjct:   44 SVQPAILVLATKAVMKLVASCGIGYYFSKKGILDQ--------------------------------KLSKLLVLPVFAVLQILFGSAV 100          
BLAST of mRNA_E-fasciculatus_F_contig14235.3099.1 vs. uniprot
Match: W7U1P2_9STRA (Membrane transporter n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1P2_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 1.930e-19
Identity = 47/85 (55.29%), Postives = 62/85 (72.94%), Query Frame = 0
Query:    3 VQPAILVLATKAVMKLVASCGIGYYFSKKGILDQSAITSLSKLIFFVFQPCLLFVNVASTLGTPGQKLSKLLVLPVFAVLQIVFG 87
            +QP     +  AV++LVASCG+G   +  G+LDQ+++++LS+LIF  FQP LLF NVA+TL TP    S LLVLP FAVLQI+FG
Sbjct:  112 IQPTAFKTSVNAVLRLVASCGLGLGAASHGLLDQASLSTLSRLIFAFFQPALLFTNVATTLATPSSYGSSLLVLPAFAVLQILFG 196          
BLAST of mRNA_E-fasciculatus_F_contig14235.3099.1 vs. uniprot
Match: A0A7S2SS74_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SS74_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 6.740e-16
Identity = 41/80 (51.25%), Postives = 58/80 (72.50%), Query Frame = 0
Query:   11 ATKAVMKLVASCGIGYYFSKKGILDQSAITSLSKLIFFVFQPCLLFVNVASTLGTPGQKLSKLLVLPVFAVLQIVFGSAV 90
            +  AV KL+A   +G++ + + +LD +A + LS+LIFF+FQP LL VNVA+TL TPGQ LS L ++P+FA+ QI  GS V
Sbjct:   88 SASAVSKLIAVVSLGFWAADRKVLDANACSVLSRLIFFIFQPALLCVNVATTLSTPGQSLSTLGIIPLFALSQIAVGSLV 167          
BLAST of mRNA_E-fasciculatus_F_contig14235.3099.1 vs. uniprot
Match: A0A482USC9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482USC9_9ARCH)

HSP 1 Score: 76.6 bits (187), Expect = 2.140e-14
Identity = 44/82 (53.66%), Postives = 57/82 (69.51%), Query Frame = 0
Query:   11 ATKAVMKLVASCGIGYYFSKKGILDQSAITSLSKLIFFVFQPCLLFVNVASTLGTPGQKLSK-----LLVLPVFAVLQIVFG 87
            A KA+ KL+A+CGIG   S   ILDQ+A++ LSKLIF VFQPCLLFVNVAST+   G+  S      + +LP+ A+LQ + G
Sbjct:  121 AYKAISKLLATCGIGVLASNYKILDQTALSVLSKLIFSVFQPCLLFVNVASTVANLGKNTSAGSPAAIYLLPLAALLQTLLG 202          
BLAST of mRNA_E-fasciculatus_F_contig14235.3099.1 vs. uniprot
Match: A0A4D9D5S5_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D5S5_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 2.890e-11
Identity = 35/80 (43.75%), Postives = 52/80 (65.00%), Query Frame = 0
Query:   11 ATKAVMKLVASCGIGYYFSKKGILDQSAITSLSKLIFFVFQPCLLFVNVASTLGTPGQKLSKLLVLPVFAVLQIVFGSAV 90
            A+ AV+ LVA C +G   S+  +LDQ A+++LS+L++ VFQP LLF NV   L TP Q    + +LP+ A +QIV  + +
Sbjct:   26 ASGAVLNLVACCCLGVTASRYRVLDQQALSALSRLVYNVFQPSLLFTNVLQILATPSQARGTIFLLPLAAAVQIVTAAGI 105          
BLAST of mRNA_E-fasciculatus_F_contig14235.3099.1 vs. uniprot
Match: W7TA92_9STRA (Auxin efflux carrier-like protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TA92_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 3.140e-9
Identity = 34/89 (38.20%), Postives = 57/89 (64.04%), Query Frame = 0
Query:    2 SVQPAILVLATKAVMKLVASCGIGYYFSKKGILDQSAITSLSKLIFFVFQPCLLFVNVASTLGTPGQKLSKLLVLPVFAVLQIVFGSAV 90
            ++ P ++  +  AV +L+ +CGIG +F+++GIL + AI +LS +++ +  P LL VNVA T+ T    L  LL LP+F  +QI+  S +
Sbjct:  106 NLDPVVVKASLTAVGELLVACGIGAWFTRRGILGREAIANLSSIVYHILLPSLLVVNVAKTVYT--TPLRTLLPLPLFGTMQILLCSCI 192          
BLAST of mRNA_E-fasciculatus_F_contig14235.3099.1 vs. uniprot
Match: A0A4D9CQA1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CQA1_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 3.220e-9
Identity = 34/89 (38.20%), Postives = 57/89 (64.04%), Query Frame = 0
Query:    2 SVQPAILVLATKAVMKLVASCGIGYYFSKKGILDQSAITSLSKLIFFVFQPCLLFVNVASTLGTPGQKLSKLLVLPVFAVLQIVFGSAV 90
            ++ P ++  +  AV +L+ +CGIG +F+++GIL + AI +LS +++ +  P LL VNVA T+ T    L  LL LP+F  +QI+  S +
Sbjct:   43 NLDPVVVKASLTAVGELLVACGIGAWFTRRGILGREAIANLSSIVYHILLPSLLVVNVAKTVYT--TPLRTLLPLPLFGTMQILLCSCI 129          
BLAST of mRNA_E-fasciculatus_F_contig14235.3099.1 vs. uniprot
Match: A0A7S3Q171_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q171_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 4.260e-9
Identity = 41/97 (42.27%), Postives = 55/97 (56.70%), Query Frame = 0
Query:    4 QPAILVLATKAVMKLVASCGIGYYFSKKG------ILDQSAITSLSKLIFFVFQPCLLFVNVASTLGTP------GQKLSKLLVLPVFAVLQIVFGS 88
             PA+L  +  A  KL++S GIG   +  G      ILD +A+TSLS+L +++FQPC L   VASTL         G   S LL+LP+ A LQI  G+
Sbjct:   72 NPAVLTASLSATSKLLSSIGIGALTTPAGPKQFGNILDGAAVTSLSRLTYWLFQPCFLLCGVASTLAKASSATGAGIPTSSLLLLPLAATLQISLGA 168          
BLAST of mRNA_E-fasciculatus_F_contig14235.3099.1 vs. uniprot
Match: A0A6H5KMD6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KMD6_9PHAE)

HSP 1 Score: 61.6 bits (148), Expect = 4.320e-9
Identity = 33/88 (37.50%), Postives = 54/88 (61.36%), Query Frame = 0
Query:    3 VQPAILVLATKAVMKLVASCGIGYYFSKKGILDQSAITSLSKLIFFVFQPCLLFVNVASTLGTPGQKLSKLLVLPVFAVLQIVFGSAV 90
            + P ++  +T+AV +L+  C +G   +KKGIL    + +LSK+++ +F P LL VNVA T     Q ++ LL +P FA +Q+  G A+
Sbjct:  135 INPVVVKASTRAVSELLCCCVLGVVAAKKGILTPVNVAALSKIVYGIFLPSLLMVNVAKT--CVSQSVASLLPIPAFAGIQVALGLAI 220          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14235.3099.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A6H5JBW8_9PHAE5.280e-4298.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LM61_ECTSI9.740e-2062.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
W7U1P2_9STRA1.930e-1955.29Membrane transporter n=3 Tax=Monodopsidaceae TaxID... [more]
A0A7S2SS74_9STRA6.740e-1651.25Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A482USC9_9ARCH2.140e-1453.66Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A4D9D5S5_9STRA2.890e-1143.75Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
W7TA92_9STRA3.140e-938.20Auxin efflux carrier-like protein n=2 Tax=Nannochl... [more]
A0A4D9CQA1_9STRA3.220e-938.20Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S3Q171_9STRA4.260e-942.27Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A6H5KMD6_9PHAE4.320e-937.50Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004776Membrane transport proteinPFAMPF03547Mem_transcoord: 12..89
e-value: 6.9E-8
score: 31.3
NoneNo IPR availablePANTHERPTHR31419:SF1PROTEIN PIN-LIKES 6coord: 7..89
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 30..40
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 65..69
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 90..90
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..29
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 70..89
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 41..64
NoneNo IPR availableTMHMMTMhelixcoord: 70..87
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availableTMHMMTMhelixcoord: 39..61
IPR039305Protein PIN-LIKES 2/6PANTHERPTHR31419FAMILY NOT NAMEDcoord: 7..89

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14235contigE-fasciculatus_F_contig14235:26..2885 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14235.3099.1mRNA_E-fasciculatus_F_contig14235.3099.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14235 26..2915 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14235.3099.1 ID=prot_E-fasciculatus_F_contig14235.3099.1|Name=mRNA_E-fasciculatus_F_contig14235.3099.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=90bp
MSVQPAILVLATKAVMKLVASCGIGYYFSKKGILDQSAITSLSKLIFFVF
QPCLLFVNVASTLGTPGQKLSKLLVLPVFAVLQIVFGSAV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039305PILS2/6
IPR004776Mem_trans