mRNA_E-fasciculatus_F_contig14232.3097.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig14232.3097.1
Unique NamemRNA_E-fasciculatus_F_contig14232.3097.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig14232.3097.1 vs. uniprot
Match: D8LLZ6_ECTSI (MFS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLZ6_ECTSI)

HSP 1 Score: 363 bits (933), Expect = 4.190e-121
Identity = 192/207 (92.75%), Postives = 196/207 (94.69%), Query Frame = 1 
Query:    1 MEDGGGDDGNSRETNQHRRPQRRPDDQFSWFVLMLTVMSALGGFLFGYDTGVVSGAMLLIKQDFGLSDWQEEVIVSVTIVAAVTAAVSGGPAMERWGRRPVILLAAVIFTVGAVILAAATSYGTLVGGRLVVGVGIGLASLTTPVYIAEASPSHIRGKLVTLNTLFITVGQVVAGIVDGLFSDTDGGWRYMLGLSGVPSFIMTMGFL 621
            MEDGGGD  NSRETNQH   QRRPDD  SWFVLMLTV SALGGFLFGYDTGVVSGAMLLIKQDF LSDWQEEVIVSVTIVAAVTAAV+GGPAMERWGRRPVILLAAV+FTVGAV+LAAATSY TLVGGRLVVGVGIGLASLTTPVYIAEASPS IRGKLVTLNTLFITVGQVVAGIVDGLFSDTDGGWRYMLGLSGVPSF+MTMGFL
Sbjct:   17 MEDGGGDXDNSRETNQH---QRRPDDHLSWFVLMLTVTSALGGFLFGYDTGVVSGAMLLIKQDFSLSDWQEEVIVSVTIVAAVTAAVAGGPAMERWGRRPVILLAAVVFTVGAVMLAAATSYSTLVGGRLVVGVGIGLASLTTPVYIAEASPSRIRGKLVTLNTLFITVGQVVAGIVDGLFSDTDGGWRYMLGLSGVPSFLMTMGFL 220
[Close]
BLAST of mRNA_E-fasciculatus_F_contig14232.3097.1 vs. uniprot
Match: D7FN74_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN74_ECTSI)

HSP 1 Score: 219 bits (559), Expect = 4.890e-70
Identity = 117/129 (90.70%), Postives = 120/129 (93.02%), Query Frame = 1 
Query:    1 MEDGGGDDGNSRETNQHRRPQRRPDDQFSWFVLMLTVMSALGGFLFGYDTGVVSGAMLLIKQDFGLSDWQEEVIVSVTIVAAVTAAVSGGPAMERWGRRPVILLAAVIFTVGAVILAAATSYGTLVGGR 387
            MEDGGGDD NSRETNQH   QRRPDD  SWFVLMLTV SALGGFLFGYDTGVVSGAMLLIKQDF LSDWQEEVIVSVTIVAAVTAAV+GGPAMERWGRRPVILLAAV+FTVGAV+LAAATSY TLVGGR
Sbjct:   17 MEDGGGDDDNSRETNQH---QRRPDDHLSWFVLMLTVTSALGGFLFGYDTGVVSGAMLLIKQDFSLSDWQEEVIVSVTIVAAVTAAVAGGPAMERWGRRPVILLAAVVFTVGAVMLAAATSYSTLVGGR 142
[Close]
BLAST of mRNA_E-fasciculatus_F_contig14232.3097.1 vs. uniprot
Match: A0A7S3YAN5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YAN5_HETAK)

HSP 1 Score: 216 bits (551), Expect = 2.450e-68
Identity = 106/176 (60.23%), Postives = 140/176 (79.55%), Query Frame = 1 
Query:   91 FVLMLTVMSALGGFLFGYDTGVVSGAMLLIKQDFGLSDWQEEVIVSVTIVAAVTAAVSGGPAMERWGRRPVILLAAVIFTVGAVILAAATSYGTLVGGRLVVGVGIGLASLTTPVYIAEASPSHIRGKLVTLNTLFITVGQVVAGIVDGLFSDTDGGWRYMLGLSGVPSFIMTMGF 618
            F++ LT M+A+GGFLFGYDTGV+SGAM+LI+QDF LS  Q+EV+VS+T+  A+  A  GG   ER GR+P ILL+++IF +G+V+L+ ++SY  LV GRL+VG+GIG+ASL  P+YIAEA+P+H+RG LVTLNTLFIT GQ  AG+VDGLFS   GGWR+MLGL  +P+ +   GF
Sbjct:    4 FIVFLTGMAAIGGFLFGYDTGVISGAMILIRQDFNLSAEQQEVVVSITVTGAIFGACFGGLLTERRGRKPAILLSSLIFLLGSVLLSLSSSYNLLVFGRLIVGLGIGMASLAVPMYIAEAAPAHLRGMLVTLNTLFITGGQFTAGMVDGLFSSVPGGWRWMLGLGALPAAVQLCGF 179
[Close]
BLAST of mRNA_E-fasciculatus_F_contig14232.3097.1 vs. uniprot
Match: A0A836CJI9_9STRA (Solute carrier family 2, member 13-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJI9_9STRA)

HSP 1 Score: 221 bits (563), Expect = 3.720e-65
Identity = 112/188 (59.57%), Postives = 140/188 (74.47%), Query Frame = 1 
Query:   58 PQRRPDDQFSWFVLMLTVMSALGGFLFGYDTGVVSGAMLLIKQDFGLSDWQEEVIVSVTIVAAVTAAVSGGPAMERWGRRPVILLAAVIFTVGAVILAAATSYGTLVGGRLVVGVGIGLASLTTPVYIAEASPSHIRGKLVTLNTLFITVGQVVAGIVDGLFSDTDGGWRYMLGLSGVPSFIMTMGFL 621
            P +RP D+ + +V++LT+ +A GGFLFGYDTGVVSGAML I+ + GLSD Q+E +VS TI AAV A+  GG A + +GRRPV+L AA  FT GA +L AA  +G L+ GR VVG GIGLASLT PVYIAEA+P+ +RG+L+TLNTL IT GQ  AG+VDG  S   GGWR+MLGLS  P+ +M   FL
Sbjct:   45 PIKRPPDETTPYVIVLTLAAACGGFLFGYDTGVVSGAMLKIRAELGLSDVQQEAVVSATIAAAVVASALGGAASQAYGRRPVLLFAAATFTAGAALLGAAPGFGALLAGRAVVGAGIGLASLTAPVYIAEAAPTRLRGRLLTLNTLLITAGQFAAGMVDGALSAVPGGWRWMLGLSAAPALLMGAAFL 232
[Close]
BLAST of mRNA_E-fasciculatus_F_contig14232.3097.1 vs. uniprot
Match: UPI00074FB149 (proton myo-inositol cotransporter-like n=1 Tax=Gekko japonicus TaxID=146911 RepID=UPI00074FB149)

HSP 1 Score: 205 bits (521), Expect = 9.310e-63
Identity = 106/183 (57.92%), Postives = 139/183 (75.96%), Query Frame = 1 
Query:   76 DQFSWFVLMLTVMSALGGFLFGYDTGVVSGAMLLIKQDFGLSDWQEEVIVSVTIVAAVTAAVSGGPAMERWGRRPVILLAAVIFTVGAVILAAATSYGTLVGGRLVVGVGIGLASLTTPVYIAEASPSHIRGKLVTLNTLFITVGQVVAGIVDGLFSDTD-GGWRYMLGLSGVPSFIMTMGFL 621
            D+   FV +++V SALGGFLFGYDTGVVSGA+LL+K++  L  + +E++VS T+ AA  +A++GG     WGRRP ILLA+ IF  GAV+LAAA +  TL+GGR+VVG+GIG+AS+T PVYIAE +P H+RG+LVT+N LFIT GQ  A ++DG FS     GWRYMLGLS +P+ I  +GFL
Sbjct:   43 DETPAFVYVVSVFSALGGFLFGYDTGVVSGALLLLKKELHLDAFWQELLVSSTVGAAAVSALAGGALNGCWGRRPCILLASCIFMAGAVLLAAAQNKETLLGGRIVVGLGIGIASMTVPVYIAEVAPPHLRGRLVTINALFITGGQFFASVIDGAFSYLPKNGWRYMLGLSAIPAVIQFLGFL 225
[Close]
BLAST of mRNA_E-fasciculatus_F_contig14232.3097.1 vs. uniprot
Match: A0A6I9Y544_9SAUR (proton myo-inositol cotransporter n=1 Tax=Thamnophis sirtalis TaxID=35019 RepID=A0A6I9Y544_9SAUR)

HSP 1 Score: 204 bits (519), Expect = 1.870e-62
Identity = 108/183 (59.02%), Postives = 137/183 (74.86%), Query Frame = 1 
Query:   76 DQFSWFVLMLTVMSALGGFLFGYDTGVVSGAMLLIKQDFGLSDWQEEVIVSVTIVAAVTAAVSGGPAMERWGRRPVILLAAVIFTVGAVILAAATSYGTLVGGRLVVGVGIGLASLTTPVYIAEASPSHIRGKLVTLNTLFITVGQVVAGIVDGLFSDTD-GGWRYMLGLSGVPSFIMTMGFL 621
            D+ + FV +    SALGGFLFGYDTGVVSGA+LL+K++  L    +E++VS T+ AA  AA+ GG     WGRR  ILLA+++FT GAV+LAAA    TL+GGRLVVG+GIG+AS+T PVYIAE +P H+RG+LVT+NTLFIT GQ  A ++DG FS    GGWRYMLGLS +P+ I  +GFL
Sbjct:   83 DEPAPFVYVAAAFSALGGFLFGYDTGVVSGALLLLKKELRLDATWQELLVSSTVGAAALAALLGGALNGYWGRRACILLASLLFTAGAVLLAAAPDKETLLGGRLVVGLGIGIASMTVPVYIAEVAPPHLRGRLVTINTLFITGGQFFASVIDGAFSYLPKGGWRYMLGLSAIPAVIQFVGFL 265
[Close]
BLAST of mRNA_E-fasciculatus_F_contig14232.3097.1 vs. uniprot
Match: A0A401PF61_SCYTO (MFS domain-containing protein (Fragment) n=1 Tax=Scyliorhinus torazame TaxID=75743 RepID=A0A401PF61_SCYTO)

HSP 1 Score: 206 bits (523), Expect = 2.970e-62
Identity = 104/178 (58.43%), Postives = 137/178 (76.97%), Query Frame = 1 
Query:   91 FVLMLTVMSALGGFLFGYDTGVVSGAMLLIKQDFGLSDWQEEVIVSVTIVAAVTAAVSGGPAMERWGRRPVILLAAVIFTVGAVILAAATSYGTLVGGRLVVGVGIGLASLTTPVYIAEASPSHIRGKLVTLNTLFITVGQVVAGIVDGLFSDTD-GGWRYMLGLSGVPSFIMTMGFL 621
            F+ +L   +ALGGFLFGYDTGVVSGA+LL+K++F LS   +E++VS T+ AA  +A++GG     WGRRP ILLA+ +FT GAV++ A+    TL+ GR+VVG+GIGLAS+T  VYIAEA+PSH+RG+LVT+NTLFIT GQ  A ++DG FS  +  GWRYMLGLS +P+ I  +GFL
Sbjct:   76 FIYLLATFAALGGFLFGYDTGVVSGALLLLKKEFALSQLWQELVVSATVGAAAVSALAGGLLNGYWGRRPCILLASFLFTAGAVVMTASGDRYTLLTGRIVVGLGIGLASMTVTVYIAEAAPSHLRGRLVTINTLFITGGQFFASVIDGAFSYLERNGWRYMLGLSAIPAIIQFVGFL 253
[Close]
BLAST of mRNA_E-fasciculatus_F_contig14232.3097.1 vs. uniprot
Match: B7FYT5_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FYT5_PHATC)

HSP 1 Score: 213 bits (542), Expect = 4.980e-62
Identity = 108/184 (58.70%), Postives = 144/184 (78.26%), Query Frame = 1 
Query:   76 DQFSWFVLMLTVMSALGGFLFGYDTGVVSGAMLLIKQDFGLSDWQEEVIVSVTIVAAVTAAVSGGPAMERWGRRPVILLAAVIFTVGAVILAAATSYGTLVGGRLVVGVGIGLASLTTPVYIAEASPSHIRGKLVTLNTLFITVGQVVAGIVDGLFSDT--DGGWRYMLGLSGVPSFIMTMGFL 621
            DQ +  +  LT M+ALGGFLFGYDTGV+SGAML+I+++F L+ WQ+EV+VS T+++A  ++++GG     WGRRP ILLAA +FTVG+++L  A SY TLV GR++VGVGIGLASLTTP+YIAE +    RG+LVT+N L +T+GQ VAG+VDG+F     + GWRYMLGL+ +PS IM +GFL
Sbjct:   77 DQVARRMRHLTTMAALGGFLFGYDTGVISGAMLMIRREFVLTPWQQEVVVSSTVLSAFFSSIAGGSLNRVWGRRPCILLAAAVFTVGSLVLGGAWSYRTLVLGRIIVGVGIGLASLTTPMYIAEMAAPTFRGQLVTINALLVTIGQFVAGMVDGVFHGLLPETGWRYMLGLATLPSMIMFLGFL 260
[Close]
BLAST of mRNA_E-fasciculatus_F_contig14232.3097.1 vs. uniprot
Match: UPI001425B4B0 (proton myo-inositol cotransporter-like isoform X1 n=2 Tax=Anneissia japonica TaxID=1529436 RepID=UPI001425B4B0)

HSP 1 Score: 209 bits (533), Expect = 4.020e-61
Identity = 107/178 (60.11%), Postives = 142/178 (79.78%), Query Frame = 1 
Query:   91 FVLMLTVMSALGGFLFGYDTGVVSGAMLLIKQDFGLSDWQEEVIVSVTIVAAVTAAVSGGPAMERWGRRPVILLAAVIFTVGAVILAAATSYGTLVGGRLVVGVGIGLASLTTPVYIAEASPSHIRGKLVTLNTLFITVGQVVAGIVDGLFSDT-DGGWRYMLGLSGVPSFIMTMGFL 621
            +V +L  ++ LGGFLFGYDTGVVSGAM+L+K DF LS   +E+IVSVTI AA  +A+ GG   +R+GRRPVI+ ++++F+ G+++L  A    TL+ GR++VGVGIGLAS+T P+YIAEASPSH+RG+LVT+N LFIT GQ+VA IVDGLFS+  D GWRYMLGL+ VP+ +  +GFL
Sbjct:   31 YVAVLACVAGLGGFLFGYDTGVVSGAMILLKDDFELSILWQELIVSVTIGAAAISALIGGVLNDRFGRRPVIITSSIVFSCGSLVLGFAQDKQTLLIGRIIVGVGIGLASMTVPMYIAEASPSHVRGRLVTVNNLFITGGQLVASIVDGLFSENADNGWRYMLGLAAVPAILQLIGFL 208
[Close]
BLAST of mRNA_E-fasciculatus_F_contig14232.3097.1 vs. uniprot
Match: UPI0009A3266D (proton myo-inositol cotransporter n=1 Tax=Rhincodon typus TaxID=259920 RepID=UPI0009A3266D)

HSP 1 Score: 205 bits (522), Expect = 5.660e-61
Identity = 103/178 (57.87%), Postives = 139/178 (78.09%), Query Frame = 1 
Query:   91 FVLMLTVMSALGGFLFGYDTGVVSGAMLLIKQDFGLSDWQEEVIVSVTIVAAVTAAVSGGPAMERWGRRPVILLAAVIFTVGAVILAAATSYGTLVGGRLVVGVGIGLASLTTPVYIAEASPSHIRGKLVTLNTLFITVGQVVAGIVDGLFSDTD-GGWRYMLGLSGVPSFIMTMGFL 621
            FV +L   +ALGGFLFGYDTGVVSGA+LL+K++F L++  +E++VS T+ AA  +A++GG     WGRRP ILLA+++FT+GAV++ A +    L+ GR+VVG+GIGLAS+T  VYIAEA+PSH+RG+LVT+NTLFIT GQ  A ++DG FS  +  GWRYMLGLS VP+ +  +GFL
Sbjct:   32 FVYVLATFAALGGFLFGYDTGVVSGALLLLKKEFALNELWQELVVSATVGAAAISALAGGLLNGCWGRRPCILLASLLFTLGAVVMTAGSDRNALLAGRVVVGLGIGLASMTVTVYIAEAAPSHLRGRLVTVNTLFITGGQFFASVIDGAFSYLETNGWRYMLGLSAVPAVVQFVGFL 209
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14232.3097.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLZ6_ECTSI4.190e-12192.75MFS domain-containing protein n=2 Tax=Ectocarpus T... [more]
D7FN74_ECTSI4.890e-7090.70MFS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S3YAN5_HETAK2.450e-6860.23Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A836CJI9_9STRA3.720e-6559.57Solute carrier family 2, member 13-like protein n=... [more]
UPI00074FB1499.310e-6357.92proton myo-inositol cotransporter-like n=1 Tax=Gek... [more]
A0A6I9Y544_9SAUR1.870e-6259.02proton myo-inositol cotransporter n=1 Tax=Thamnoph... [more]
A0A401PF61_SCYTO2.970e-6258.43MFS domain-containing protein (Fragment) n=1 Tax=S... [more]
B7FYT5_PHATC4.980e-6258.70Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
UPI001425B4B04.020e-6160.11proton myo-inositol cotransporter-like isoform X1 ... [more]
UPI0009A3266D5.660e-6157.87proton myo-inositol cotransporter n=1 Tax=Rhincodo... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14232contigE-fasciculatus_F_contig14232:1708..2906 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score366.7
Seed ortholog evalue7.2e-99
Seed eggNOG ortholog2880.D8LLZ6
Preferred nameSLC2A13
KEGG koko:K08150
KEGG TC2.A.1.1.25,2.A.1.1.62,2.A.1.1.63,2.A.1.1.66,2.A.1.8
GOsGO:0000325,GO:0003674,GO:0005215,GO:0005351,GO:0005355,GO:0005365,GO:0005366,GO:0005402,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008324,GO:0008643,GO:0008645,GO:0009705,GO:0009925,GO:0015075,GO:0015077,GO:0015078,GO:0015144,GO:0015145,GO:0015149,GO:0015166,GO:0015291,GO:0015293,GO:0015294,GO:0015295,GO:0015318,GO:0015672,GO:0015749,GO:0015791,GO:0015798,GO:0015850,GO:0016020,GO:0016021,GO:0016323,GO:0016324,GO:0022804,GO:0022857,GO:0022890,GO:0023052,GO:0031090,GO:0031224,GO:0031226,GO:0034219,GO:0034220,GO:0042995,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044437,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0045177,GO:0045178,GO:0046323,GO:0051119,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0090406,GO:0098588,GO:0098590,GO:0098655,GO:0098660,GO:0098662,GO:0098805,GO:0120025,GO:1901618,GO:1902600,GO:1904659
EggNOG free text desc.glucose import
EggNOG OGsKOG0254@1,KOG0254@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Hectar predicted targeting categorysignal anchor
Ec32 ortholog descriptionGeneral substrate transporter
Ec32 orthologEc-00_002950.1
Exons2
Model size624
Cds size624
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927914.325043-CDS-E-fasciculatus_F_contig14232:1707..20931622927914.325043-CDS-E-fasciculatus_F_contig14232:1707..2093Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14232 1708..2093 +
1695995749.5020018-CDS-E-fasciculatus_F_contig14232:1707..20931695995749.5020018-CDS-E-fasciculatus_F_contig14232:1707..2093Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14232 1708..2093 +
1622927914.3946643-CDS-E-fasciculatus_F_contig14232:2668..29061622927914.3946643-CDS-E-fasciculatus_F_contig14232:2668..2906Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14232 2669..2906 +
1695995749.5128531-CDS-E-fasciculatus_F_contig14232:2668..29061695995749.5128531-CDS-E-fasciculatus_F_contig14232:2668..2906Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14232 2669..2906 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14232.3097.1prot_E-fasciculatus_F_contig14232.3097.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig14232 1708..2906 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig14232.3097.1

>prot_E-fasciculatus_F_contig14232.3097.1 ID=prot_E-fasciculatus_F_contig14232.3097.1|Name=mRNA_E-fasciculatus_F_contig14232.3097.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=208bp
MEDGGGDDGNSRETNQHRRPQRRPDDQFSWFVLMLTVMSALGGFLFGYDT
GVVSGAMLLIKQDFGLSDWQEEVIVSVTIVAAVTAAVSGGPAMERWGRRP
VILLAAVIFTVGAVILAAATSYGTLVGGRLVVGVGIGLASLTTPVYIAEA
SPSHIRGKLVTLNTLFITVGQVVAGIVDGLFSDTDGGWRYMLGLSGVPSF
IMTMGFL*
back to top

mRNA from alignment at E-fasciculatus_F_contig14232:1708..2906+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig14232.3097.1 ID=mRNA_E-fasciculatus_F_contig14232.3097.1|Name=mRNA_E-fasciculatus_F_contig14232.3097.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1199bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14232:1708..2906+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGAGGATGGAGGTGGCGACGACGGCAACAGCCGAGAAACCAACCAACA
TCGACGACCACAACGGCGCCCCGATGACCAGTTCTCCTGGTTTGTTCTGA
TGCTGACCGTCATGTCCGCGCTTGGCGGCTTCCTGTTCGGCTACGACACG
GGCGTGGTATCCGGCGCGATGCTCCTGATCAAGCAGGACTTCGGCCTGAG
CGACTGGCAGGAGGAGGTGATCGTGAGCGTGACCATCGTCGCGGCGGTGA
CGGCCGCCGTGTCCGGCGGCCCGGCGATGGAGCGGTGGGGGCGGCGCCCG
GTCATCCTGCTGGCGGCGGTCATCTTCACGGTCGGGGCGGTGATACTCGC
CGCGGCGACGTCGTACGGGACCTTGGTGGGCGGCAGGTGCGCGCGTGTTT
GCGTTCGCGCTGCATTTTGGCTTCGACATGCATTTTAAAGCTACAGCTTG
TGGCGTGCCTGCTGCTGCTGTGCAACTACCTGCCTGTCCATGCTACAATA
TTTACTGCTGTACCATAATTGCGCCGCACCGTCCATGTCGAAGTTACTCT
CGCGTGGACTGCTGTGTGTTTCCGCCTCTCTCTCGTCTCGTACAAACTGG
AGTCGGTCAAAGTTGTTCATGATTAGGGAATGACTGAATGGAGCTATGTG
TGTTGAGTTCTCGAGAGAGTACCATGGTGATGCAGTGCTGTTAGGGGATT
GAGTCAGTTACATCTCATCTACAGAGTAGACAGAACAACGTCTGAAACAG
CCGATAACACTTTCCCCCACCAGCCCGCCAGATCTAGCGCTCTCATCTTT
GCGACCCCGACCTCCTTGATTACTCTGGGTGAAAGCCACGCCGGACCTCC
GACAAAATATGTAGTCCAGAGACCATGTGTTGTCATTATTCCTAGTCACT
GATAACCCGCAATGATGCTCAACATTCACGTGCACGCATATATACCAAAA
TCGATACGCAGGCTTGTCGTGGGCGTGGGGATAGGTTTGGCGAGCCTGAC
GACGCCGGTGTACATCGCGGAGGCCTCCCCCAGCCACATCCGCGGCAAGC
TGGTGACCCTCAACACGCTCTTCATCACCGTGGGGCAGGTGGTGGCCGGC
ATCGTGGACGGCCTCTTCTCCGACACGGACGGCGGGTGGAGGTACATGCT
CGGGCTCTCCGGGGTGCCGAGCTTCATCATGACCATGGGTTTCCTGTGA
back to top

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14232:1708..2906+

>mRNA_E-fasciculatus_F_contig14232.3097.1 ID=mRNA_E-fasciculatus_F_contig14232.3097.1|Name=mRNA_E-fasciculatus_F_contig14232.3097.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1248bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14232:1708..2906+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGAGGATGGAGGTGGCGACGACGGCAACAGCCGAGAAACCAACCAACA
TCGACGACCACAACGGCGCCCCGATGACCAGTTCTCCTGGTTTGTTCTGA
TGCTGACCGTCATGTCCGCGCTTGGCGGCTTCCTGTTCGGCTACGACACG
GGCGTGGTATCCGGCGCGATGCTCCTGATCAAGCAGGACTTCGGCCTGAG
CGACTGGCAGGAGGAGGTGATCGTGAGCGTGACCATCGTCGCGGCGGTGA
CGGCCGCCGTGTCCGGCGGCCCGGCGATGGAGCGGTGGGGGCGGCGCCCG
GTCATCCTGCTGGCGGCGGTCATCTTCACGGTCGGGGCGGTGATACTCGC
CGCGGCGACGTCGTACGGGACCTTGGTGGGCGGCAGATGGAGGATGGAGG
TGGCGACGACGGCAACAGCCGAGAAACCAACCAACATCGACGACCACAAC
GGCGCCCCGATGACCAGTTCTCCTGGTTTGTTCTGATGCTGACCGTCATG
TCCGCGCTTGGCGGCTTCCTGTTCGGCTACGACACGGGCGTGGTATCCGG
CGCGATGCTCCTGATCAAGCAGGACTTCGGCCTGAGCGACTGGCAGGAGG
AGGTGATCGTGAGCGTGACCATCGTCGCGGCGGTGACGGCCGCCGTGTCC
GGCGGCCCGGCGATGGAGCGGTGGGGGCGGCGCCCGGTCATCCTGCTGGC
GGCGGTCATCTTCACGGTCGGGGCGGTGATACTCGCCGCGGCGACGTCGT
ACGGGACCTTGGTGGGCGGCAGGCTTGTCGTGGGCGTGGGGATAGGTTTG
GCGAGCCTGACGACGCCGGTGTACATCGCGGAGGCCTCCCCCAGCCACAT
CCGCGGCAAGCTGGTGACCCTCAACACGCTCTTCATCACCGTGGGGCAGG
TGGTGGCCGGCATCGTGGACGGCCTCTTCTCCGACACGGACGGCGGGTGG
AGGTACATGCTCGGGCTCTCCGGGGTGCCGAGCTTCATCATGACCATGGG
TTTCCTGTGAGCTTGTCGTGGGCGTGGGGATAGGTTTGGCGAGCCTGACG
ACGCCGGTGTACATCGCGGAGGCCTCCCCCAGCCACATCCGCGGCAAGCT
GGTGACCCTCAACACGCTCTTCATCACCGTGGGGCAGGTGGTGGCCGGCA
TCGTGGACGGCCTCTTCTCCGACACGGACGGCGGGTGGAGGTACATGCTC
GGGCTCTCCGGGGTGCCGAGCTTCATCATGACCATGGGTTTCCTGTGA
back to top