prot_E-fasciculatus_F_contig14222.3087.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14222.3087.1
Unique Nameprot_E-fasciculatus_F_contig14222.3087.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length184
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig14222.3087.1 vs. uniprot
Match: A0A6H5JRU2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRU2_9PHAE)

HSP 1 Score: 94.7 bits (234), Expect = 5.250e-20
Identity = 59/99 (59.60%), Postives = 71/99 (71.72%), Query Frame = 0 
Query:    1 RRRPSGEDGGSNGSCSVSPAGMEFETGDMAVAIKTGELDMSESEEQQHVSPHDTEARGEEHASSQDGDVVSELGNAN-----QERHDEAEEGTPGMDDG 94
            RR PSG++ GSNGSCS+S  GME  T +MAVA+KT E DMS+SEEQQ +S HD +A G EH SS+D DV SE+GNA+     QER  EAE  T G+D G
Sbjct:  177 RRIPSGDNSGSNGSCSMSSTGMEVATSNMAVAVKTSESDMSDSEEQQKLSQHDVKATGGEHESSRDDDVTSEVGNADFRSADQERQKEAE-ATLGIDGG 274
[Close]
BLAST of mRNA_E-fasciculatus_F_contig14222.3087.1 vs. uniprot
Match: A0A6H5KPJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPJ3_9PHAE)

HSP 1 Score: 67.4 bits (163), Expect = 2.150e-10
Identity = 49/103 (47.57%), Postives = 57/103 (55.34%), Query Frame = 0 
Query:    1 RRRPSGEDGGSNGSCSVSPAGMEFETGDMAVAIKTGELDMSESEEQQHV------------SPHDTEARGEEHASSQDGDVVSELGNANQERHDEAEEGTPGM 91
            RR PSG   G+ GS S S +G+E E G +   +KT E DMSE                   +P DTE  GEEH SS DG +VSE GNA+ ERH EAE  TPGM
Sbjct:   67 RRTPSGYKSGNKGSGSTSCSGVEAENGGVTATVKTWESDMSEXXXXXXXXXXXXXXXXXEDTPQDTEDIGEEHESSHDGGLVSESGNADHERHGEAEV-TPGM 168
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14222.3087.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JRU2_9PHAE5.250e-2059.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KPJ3_9PHAE2.150e-1047.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 97..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14222contigE-fasciculatus_F_contig14222:47..3289 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14222.3087.1mRNA_E-fasciculatus_F_contig14222.3087.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14222 47..3289 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14222.3087.1 ID=prot_E-fasciculatus_F_contig14222.3087.1|Name=mRNA_E-fasciculatus_F_contig14222.3087.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=184bp
RRRPSGEDGGSNGSCSVSPAGMEFETGDMAVAIKTGELDMSESEEQQHVS
PHDTEARGEEHASSQDGDVVSELGNANQERHDEAEEGTPGMDDGEEKEEE
EDHGEREEQEAGDEEDEKHEENEENANASSEVQPSPPAGTVYGRLAAGDP
TTLKEIAAVSAKTRCYLLFQTTSSMVIFLRQSR*
back to top