mRNA_E-fasciculatus_F_contig14217.3083.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14217.3083.1 vs. uniprot
Match: A0A6H5JN40_9PHAE (Importin N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JN40_9PHAE) HSP 1 Score: 270 bits (690), Expect = 2.020e-82 Identity = 131/134 (97.76%), Postives = 133/134 (99.25%), Query Frame = 1
Query: 1 DGDLMEYIENACDVLSFLTYYGPGISEQLWSVFPMLYRTWDKWAFDLISNMAVPIDNYISRGTDVFIAGRSAEGNRYIEMLLDMCGRVMKDERQSEKEARTAVQLMMVVLHNCKGRIDEYIPPILAMLSERVRT 402
DGDL+EYIENACDVLSFLTYYG GISEQLWSVFPMLYRTWDKWAFDLISNMAVPIDNYISRGTDVFIAGRSAEG+RYIEMLLDMCGRVMKDERQSEKEARTAVQLMMVVLHNCKGRIDEYIPPILAMLSERVRT
Sbjct: 657 DGDLIEYIENACDVLSFLTYYGAGISEQLWSVFPMLYRTWDKWAFDLISNMAVPIDNYISRGTDVFIAGRSAEGDRYIEMLLDMCGRVMKDERQSEKEARTAVQLMMVVLHNCKGRIDEYIPPILAMLSERVRT 790
BLAST of mRNA_E-fasciculatus_F_contig14217.3083.1 vs. uniprot
Match: D8LU38_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU38_ECTSI) HSP 1 Score: 142 bits (357), Expect = 1.870e-41 Identity = 67/71 (94.37%), Postives = 68/71 (95.77%), Query Frame = 1
Query: 13 MEYIENACDVLSFLTYYGPGISEQLWSVFPMLYRTWDKWAFDLISNMAVPIDNYISRGTDVFIAGRSAEGN 225
MEYI+NA DVL FLTYYG GISEQLWSVFPMLYRTWDKWAFDLISNMAVPIDNYISRGTDVFIAGRSAEGN
Sbjct: 1 MEYIQNAWDVLRFLTYYGAGISEQLWSVFPMLYRTWDKWAFDLISNMAVPIDNYISRGTDVFIAGRSAEGN 71
BLAST of mRNA_E-fasciculatus_F_contig14217.3083.1 vs. uniprot
Match: A0A7S0C708_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C708_9STRA) HSP 1 Score: 131 bits (329), Expect = 7.850e-34 Identity = 57/136 (41.91%), Postives = 95/136 (69.85%), Query Frame = 1
Query: 1 DGDLMEYIENACDVLSFLTYYGPGISEQLWSVFPMLYRTWDKWAFDLISNMAVPIDNYISRGTDVFIAGRSAEGNRYIEMLLDMCGRVMKDERQSEKEARTAVQLMMVVLHNCKGRIDEYIPPI----LAMLSERV 396
DG+ +EY+E A D+L+FLTY+ +S QLW FP++Y+++D++AFD +S M +P++N+I + D F+A +++G +YI+++ + GR + ++R SE E R A+ L M VLHNC G++D Y+ I L LS++V
Sbjct: 45 DGEFIEYLEYALDILTFLTYFPTELSPQLWEAFPLIYQSFDQYAFDYLSLMVMPLENFIGKSPDYFLAAVTSDGVKYIDLIFKIVGRTLAEDRSSESECRKALSLYMTVLHNCNGKVDSYLSIINDVTLLKLSQQV 180
BLAST of mRNA_E-fasciculatus_F_contig14217.3083.1 vs. uniprot
Match: A0A6U2DQK1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A6U2DQK1_9STRA) HSP 1 Score: 120 bits (300), Expect = 1.590e-30 Identity = 57/140 (40.71%), Postives = 88/140 (62.86%), Query Frame = 1
Query: 1 DGDLMEYIENACDVLSFLTYYGPGISEQLWSVFPMLYRTWDKWAFDLISNMAVPIDNYISRGTDVFIAGRSAEGN----RYIEMLLDMCGRVMKDERQSEKEARTAVQLMMVVLHNCKGRIDEYIPP----ILAMLSERV 396
DG+ +EY+E A D+L+FLTY+ IS QLW FP++Y +D+WAFD ++ M P++N+I + F+ G + + YI+++ M + + +ER SE E R AV L M VLHNC+G +D Y+P +LA L ++V
Sbjct: 128 DGEYIEYLEYALDILTFLTYFPDEISPQLWEAFPLIYVAFDQWAFDYLNLMVPPLENFIGKSPRQFLQGTATTPDGATVSYIDLVFSMVAKTVAEERSSESECRKAVSLYMSVLHNCRGLVDAYLPMMNDIVLAKLGQQV 267
BLAST of mRNA_E-fasciculatus_F_contig14217.3083.1 vs. uniprot
Match: A0A7S4RDK4_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RDK4_9STRA) HSP 1 Score: 122 bits (306), Expect = 1.110e-29 Identity = 57/139 (41.01%), Postives = 94/139 (67.63%), Query Frame = 1
Query: 1 DGDLMEYIENACDVLSFLTYYGPGISEQLWSVFPMLYRTWDKWAFDLISNMAVPIDNYISRGTDVFIAGRSA--EGN-RYIEMLLDMCGRVMKDERQSEKEARTAVQLMMVVLHNCKGRIDEYIPPI----LAMLSERV 396
DG+ +EY+E A D+L+FLTY+ IS +LW FP++Y +D+WAFD ++ M P++N+I + F+AG ++ EG +YIE++ + + + +ER SE E+R A+ L M +LHNC+G++D Y+P + LA L ++V
Sbjct: 720 DGEYIEYLEYALDILTFLTYFPDHISPELWQAFPLIYIAFDQWAFDYLNLMVPPLENFIGKAPQQFLAGTASTPEGEVKYIELVFSIVAKTVAEERSSESESRKALSLYMSILHNCRGQVDLYLPMMNDIALAKLGQQV 858
BLAST of mRNA_E-fasciculatus_F_contig14217.3083.1 vs. uniprot
Match: A0A7S3LFB3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LFB3_9STRA) HSP 1 Score: 118 bits (295), Expect = 1.560e-28 Identity = 54/125 (43.20%), Postives = 87/125 (69.60%), Query Frame = 1
Query: 1 DGDLMEYIENACDVLSFLTYYGPGISEQLWSVFPMLYRTWDKWAFDLISNMAVPIDNYISRGTDVFIAGRS--AEGN-RYIEMLLDMCGRVMKDERQSEKEARTAVQLMMVVLHNCKGRIDEYIP 366
DGD +EY+E+A D+LSFLTY+ IS ++W FP++Y +D+WA+D ++ M I +YIS+G DVF+AG + EG Y+++++ M + + ++R SE E R A+ L M +L++C GRI+ Y+P
Sbjct: 143 DGDFIEYLESALDILSFLTYFQSQISMEVWQCFPLIYMAFDQWAYDYLNMMVPCIQSYISKGPDVFLAGVAHLPEGQISYLDLVVSMVTKTLTNDRASEVECRFALSLFMTILNHCPGRINPYLP 267
BLAST of mRNA_E-fasciculatus_F_contig14217.3083.1 vs. uniprot
Match: A0A448Z8T6_9STRA (Importin N-terminal domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z8T6_9STRA) HSP 1 Score: 118 bits (296), Expect = 2.470e-28 Identity = 55/127 (43.31%), Postives = 86/127 (67.72%), Query Frame = 1
Query: 1 DGDLMEYIENACDVLSFLTYYGPGISEQLWSVFPMLYRTWDKWAFDLISNMAVPIDNYISRGTDVFIAGRSA--EGN-RYIEMLLDMCGRVMKDERQSEKEARTAVQLMMVVLHNCKGRIDEYIPPI 372
DG+ +EY+E A D+L+FLTY+ IS +LW FP++Y +D+WA+D ++ M + YI + D+F+AG++ EGN YI++++ M + + +ER SE E R A+ L M VLHNC+G++D YI I
Sbjct: 686 DGEYIEYLECALDILTFLTYFPDTISPELWQAFPLIYIAFDQWAYDYLNMMVPCLQAYIQKAPDMFLAGQAQLPEGNVPYIDLIVSMVAKTVTNERSSESECRHALSLFMGVLHNCQGKVDGYISTI 812
BLAST of mRNA_E-fasciculatus_F_contig14217.3083.1 vs. uniprot
Match: A0A1Z5JIW4_FISSO (Importin N-terminal domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JIW4_FISSO) HSP 1 Score: 117 bits (294), Expect = 4.590e-28 Identity = 55/139 (39.57%), Postives = 95/139 (68.35%), Query Frame = 1
Query: 1 DGDLMEYIENACDVLSFLTYYGPGISEQLWSVFPMLYRTWDKWAFDLISNMAVPIDNYISRGTDVFIAG--RSAEGN-RYIEMLLDMCGRVMKDERQSEKEARTAVQLMMVVLHNCKGRIDEYIP----PILAMLSERV 396
DGD +EY+E A D+L+FLT++ +S +LW FP++Y +D+WA+D ++ M + +YI +G +VF++G + AEG+ Y++M++ M + + ++ +E E R A+ L+M VL+NC GR+D+YIP +LA L ++V
Sbjct: 692 DGDFLEYLECAFDILTFLTFFQENLSPELWQAFPLVYIAFDQWAYDYLNMMVPCLLSYIQKGPEVFLSGGFQLAEGHVSYVDMVISMASKTLANDSANESECRFALSLLMGVLNNCHGRVDQYIPFINEVVLAKLGQQV 830
BLAST of mRNA_E-fasciculatus_F_contig14217.3083.1 vs. uniprot
Match: L8GGA7_ACACA (Importin beta domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GGA7_ACACA) HSP 1 Score: 117 bits (293), Expect = 6.230e-28 Identity = 52/132 (39.39%), Postives = 86/132 (65.15%), Query Frame = 1
Query: 1 DGDLMEYIENACDVLSFLTYYGPGISEQLWSVFPMLYRTWDKWAFDLISNMAVPIDNYISRGTDVFIAGRSAEGNRYIEMLLDMCGRVMKDERQSEKEARTAVQLMMVVLHNCKGRIDEYIPPILAMLSERV 396
D D ME++E ++++LT+YG GIS +W +FP+LY+ +D WA D + + +P+DNYISRG DVF+A Y++M+L M +++ D ++ +A +L+ VV C+GRIDEY+P I+ + +R+
Sbjct: 631 DDDAMEFMEETLKIMAYLTFYGRGISPAMWQLFPLLYKAFDGWATDWMDQIIIPLDNYISRGNDVFLANPD-----YLKMVLSMYQKLIGDTGVADVDAGEGAKLIEVVFQQCRGRIDEYVPGIIELAVKRL 757
BLAST of mRNA_E-fasciculatus_F_contig14217.3083.1 vs. uniprot
Match: A0A1E7ES19_9STRA (ARM repeat-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ES19_9STRA) HSP 1 Score: 116 bits (291), Expect = 1.100e-27 Identity = 54/127 (42.52%), Postives = 85/127 (66.93%), Query Frame = 1
Query: 1 DGDLMEYIENACDVLSFLTYYGPGISEQLWSVFPMLYRTWDKWAFDLISNMAVPIDNYISRGTDVFIAGRSA--EGN-RYIEMLLDMCGRVMKDERQSEKEARTAVQLMMVVLHNCKGRIDEYIPPI 372
DG+ +EY+E A D+L+FLT++ IS +LW FP++Y +D+WA+D ++ M + YI + D+F+AG++ EGN YI++++ M + + +ER SE E R A+ L M VLHNC G++D YI I
Sbjct: 341 DGEYIEYLECALDILTFLTFFPDHISPELWQAFPLIYVAFDQWAYDYLNMMVPCLQAYIQKAPDMFLAGKAQLPEGNIPYIDLIVSMVAKTVTNERSSESECRHALSLFMGVLHNCHGKVDGYISTI 467 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14217.3083.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14217.3083.1 >prot_E-fasciculatus_F_contig14217.3083.1 ID=prot_E-fasciculatus_F_contig14217.3083.1|Name=mRNA_E-fasciculatus_F_contig14217.3083.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=130bp MEYIENACDVLSFLTYYGPGISEQLWSVFPMLYRTWDKWAFDLISNMAVPback to top mRNA from alignment at E-fasciculatus_F_contig14217:444..2192- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14217.3083.1 ID=mRNA_E-fasciculatus_F_contig14217.3083.1|Name=mRNA_E-fasciculatus_F_contig14217.3083.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1749bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14217:444..2192- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14217:444..2192- >mRNA_E-fasciculatus_F_contig14217.3083.1 ID=mRNA_E-fasciculatus_F_contig14217.3083.1|Name=mRNA_E-fasciculatus_F_contig14217.3083.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=780bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14217:444..2192- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |