|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 641 |
| Cds size | 561 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14213.3080.1 >prot_E-fasciculatus_F_contig14213.3080.1 ID=prot_E-fasciculatus_F_contig14213.3080.1|Name=mRNA_E-fasciculatus_F_contig14213.3080.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=187bp
MALVPRLCVCCTPLPRHRCHRKIPREDRKREVRYWKCWRWQWRGEEGNKG
TKQRGFLANKHYRRGGSIRTLSRACGSMRRCTEGGRRLDRRKRHQAMGQD
PPTPAKIAFRGRSFRSCLAERERRRESEGWAPHAAADGNQRTPAKSRVHL
GLSRSTLSSASSVSAALMLALGGIAGGGTDAGGGGDV back to topmRNA from alignment at E-fasciculatus_F_contig14213:1286..3388+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-fasciculatus_F_contig14213.3080.1 ID=mRNA_E-fasciculatus_F_contig14213.3080.1|Name=mRNA_E-fasciculatus_F_contig14213.3080.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2103bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14213:1286..3388+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AGAAGCACGACGTGCTTTTTTATTTTTCGGATTGTGATGTTGAGCGCACA
AGCGCACAACCTCCACGATCGAACGATGAATGGCCTTAGTTCCTCGTCTG
TGTGTCTGCTGTACTCCCTTGCCCCGGCACCGTTGTCATCGCAAAATACC
GAGGGAAGACAGGAAGAGGGAGGTGCGGTACTGGAAATGCTGGCGGTGGC
AGTGGCGGGGCGAGGAGGGGAACAAGGGCACAAAGCAACGCGGGTTCCTC
GCCAATAAGCATTACCGGAGAGGGGGGAGCATACGAACCTTGTCGCGTGC
TTGTGGTAGCATGCGTCGGTGCACCGAAGGAGGTCGACGGCTTGATAGGC
GAAAGAGACACCAGGCAATGGGGCAGGATCCACCAACGCCAGCAAAGATA
GCCTTCCGAGGGAGGTGAGAGCAAACAATTGTGCACGTGTTACTACTAAG
TAGCAACTTTCACACGCAGATCATATATCCACAGTTAGTTCCGTTCGGGG
ACGAGAACTCACATGAATGGGCACGGCCAGAAGCACCAATAATTGCAGTG
TGAGGAAAGAGCCTAAATAGCACGTCGTCGTCGTCGTGTTTTTGAAGAAA
GTATGCATACCAATCAAAATGAAAACTGGTGATGTTTTTTTGTTTATGAC
GAAACAATCTTCACCCAACCGAGGCTACTGTAGACTGGACCGGGACTGTT
GGATACTCCCTCCGTTTCGCTATTTCTTTCCTTGAAAGATGCAGACGTGG
GGCAACGGGAGATGGAAAGAGAGTCAAGTACAGCCACCGATGGAAGTCAA
TAGTTCTACGAATAAGTAGTCAGGCGTAGGGTTGTAACGGCCGAACTCGA
AAGGCTTCTGGTGCATTGTTTTTGACCATGAAACACTTGGTTCCCATCGC
AAGCCATGAGAAGACCTAAACCATACAATATGAAGAGCATCTTTCACTTG
ATTTAAACGAATTACACCACACCGGAAGCATGTGTGCATTTTTACCCACG
CTACGTTTGTACAGCTGCCGTTCGTCTGCTCTCTCCTGCTTCCGTCGTGT
GCTAAGCGCCCCCAAGGGGGCTTGCCGTCCGTATTTTGATCAAACGAGGT
TTGGTTGTGTCTGCTGTGTCGGGAAGGCTGTGCCCTCCTCCCTGCTGAAT
TCACTCTTCACAGATGCCACACCCGCCCGCTCGTACTCGGCTCCAGCTGC
TGCTGGCACTGCTGCTGCTTTGCTCGACTCTCGTTCGCTACTACGACTGT
GCTACAGGTTATACCCCACCGTACTTCAACTTTCCATCCCGTGTGCAGCA
GCACTGCTCCTTGGCGGAAGGAGTTTTGCACCAAAGCACTACGGACTACT
GTACGTGGCAGGAGGGTCGCTGATGTTAACCCTGTGCCTCCTCCCGGCTA
AATTTTCGCCTCCCTGCTTGCTGCTCCTGTTGTTACTGCTGCTACTGTTG
TTGCTGCTGCTGCTGCTGCTCCTCCTGCTGCAGGTCCTTTCGATCGTGCC
TGGCAGAGAGAGAAAGGAGGCGGGAGTCCGAGGGGTGGGCGCCTCATGCT
GCTGCCGACGGCAACCAGCGGACCCCCGCCAAGTCCCGGGTGAGAGCATC
GTCGGGTTGATACCTCAACAACAACAACCACAACAACAACAACAACACCA
ACAACAACAGCAGGAAAAATAGGGTGGCGGCGGGCAGTCCTCGCCGGGTC
TCTTGGTGCTGCGGTGAGCTAAGTAGCCGTCTTGCACTGGCATGCTTGTG
CTGGGGAGCTGTTCACCAATGGTTGATTGAAGGGAAGAACAGATGTGTGG
AGCACGTTGTGGGATGATTTGTTTTTCTTCGTTCATGGGGTTTTGGCCGG
GGGGCTGATCGCGTTGAATAGGAGAACAAGGGAGAGAGCGAGGTCTTCTC
GAACGGAGCCATGGCTCAGGGGTCACACGGCTGGAAAATGCTCATACCCC
CCTCCGTCCAACCAACCGCGCATCACAAACCAGGTCCACCTTGGTCTGTC
GAGAAGTACCTTGTCTTCGGCCTCATCGGTGAGCGCAGCGCTCATGCTCG
CGCTCGGCGGTATCGCCGGTGGCGGCACCGACGCGGGCGGAGGCGGCGAC
GTC back to topCoding sequence (CDS) from alignment at E-fasciculatus_F_contig14213:1286..3388+ >mRNA_E-fasciculatus_F_contig14213.3080.1 ID=mRNA_E-fasciculatus_F_contig14213.3080.1|Name=mRNA_E-fasciculatus_F_contig14213.3080.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1122bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14213:1286..3388+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGCCTTAGTTCCTCGTCTGTGTGTCTGCTGTACTCCCTTGCCCCGGCA
CCGTTGTCATCGCAAAATACCGAGGGAAGACAGGAAGAGGGAGGTGCGGT
ACTGGAAATGCTGGCGGTGGCAGTGGCGGGGCGAGGAGGGGAACAAGGGC
ACAAAGCAACGCGGGTTCCTCGCCAATAAGCATTACCGGAGAGGGGGGAG
CATACGAACCTTGTCGCGTGCTTGTGGTAGCATGCGTCGGTGCACCGAAG
GAGGTCGACGGCTTGATAGGCGAAAGAGACACCAGGCAATGGGGCAGGAT
CCACCAACGCCAGCAAAGATAGCCTTCCGAGGGAGATGGCCTTAGTTCCT
CGTCTGTGTGTCTGCTGTACTCCCTTGCCCCGGCACCGTTGTCATCGCAA
AATACCGAGGGAAGACAGGAAGAGGGAGGTGCGGTACTGGAAATGCTGGC
GGTGGCAGTGGCGGGGCGAGGAGGGGAACAAGGGCACAAAGCAACGCGGG
TTCCTCGCCAATAAGCATTACCGGAGAGGGGGGAGCATACGAACCTTGTC
GCGTGCTTGTGGTAGCATGCGTCGGTGCACCGAAGGAGGTCGACGGCTTG
ATAGGCGAAAGAGACACCAGGCAATGGGGCAGGATCCACCAACGCCAGCA
AAGATAGCCTTCCGAGGGAGGTCCTTTCGATCGTGCCTGGCAGAGAGAGA
AAGGAGGCGGGAGTCCGAGGGGTGGGCGCCTCATGCTGCTGCCGACGGCA
ACCAGCGGACCCCCGCCAAGTCCCGGGTCCTTTCGATCGTGCCTGGCAGA
GAGAGAAAGGAGGCGGGAGTCCGAGGGGTGGGCGCCTCATGCTGCTGCCG
ACGGCAACCAGCGGACCCCCGCCAAGTCCCGGGTCCACCTTGGTCTGTCG
AGAAGTACCTTGTCTTCGGCCTCATCGGTGAGCGCAGCGCTCATGCTCGC
GCTCGGCGGTATCGCCGGTGGCGGCACCGACGCGGGCGGAGGCGGCGACG
TCGTCCACCTTGGTCTGTCGAGAAGTACCTTGTCTTCGGCCTCATCGGTG
AGCGCAGCGCTCATGCTCGCGCTCGGCGGTATCGCCGGTGGCGGCACCGA
CGCGGGCGGAGGCGGCGACGTC back to top
|