mRNA_E-fasciculatus_F_contig142.3069.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig142.3069.1 vs. uniprot
Match: A0A6H5LIJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LIJ3_9PHAE) HSP 1 Score: 223 bits (568), Expect = 4.580e-61 Identity = 115/151 (76.16%), Postives = 128/151 (84.77%), Query Frame = 1
Query: 4 RSRCLDAFVVALSQACEGGKKRWYASTLELQLTSLDMCRASRSTSILHVRVNDETPSSLWHSRTTEARPNTPSPELCMSSRVPVVRALRLTWTLSMEDLLTTAAVELWTWSQRLELQGSSCAADLGG-VVWPQRLTQLVLQTDSDIAMENV 453
R+RCLDAFV+ALSQACEGG+KRWYASTLELQLTSLD+CRA R+TSILHV V+D+TP SLW SRT + RPNT S L +SSRVPVVRALRLTW LSME LL AA+ELWTWS+RLEL GSSC + LG VVWP+ LTQLVL TDSDIAM V
Sbjct: 8 RTRCLDAFVIALSQACEGGEKRWYASTLELQLTSLDLCRACRTTSILHVHVDDQTPRSLWSSRTAQTRPNTRSWNLHISSRVPVVRALRLTWALSMEALLRKAAIELWTWSERLELLGSSCVSSLGSEVVWPRGLTQLVLYTDSDIAMGTV 158
BLAST of mRNA_E-fasciculatus_F_contig142.3069.1 vs. uniprot
Match: D7G7F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7F9_ECTSI) HSP 1 Score: 184 bits (466), Expect = 1.630e-51 Identity = 96/149 (64.43%), Postives = 110/149 (73.83%), Query Frame = 1
Query: 1 GRSRCLDAFVVALSQACEGGKKRWYASTLELQLTSLDMCRASRSTSILHVRVNDETPSSLWHSRTTEARPNTPSPELCMSSRVPVVRALRLTWTLSMEDLLTTAAVELWTWSQRLELQGSSCAADLGGVVWPQRLTQLVLQTDSDIAME 447
G +R DAF +ALSQACEGG+KRWY ST ELQL SLD+CRA RST LHVRV TP+SLW T +A PNT S ++ + SRVPVVRALRLTW SME L+ AA+ELW+ S+RLE+ G CAA LG VVWP LTQLVL TD I ME
Sbjct: 5 GYTRSFDAFAIALSQACEGGEKRWYTSTTELQLGSLDICRACRSTPTLHVRVTGGTPTSLWSPPTVQALPNTQSSKVRVVSRVPVVRALRLTWAFSMETLVQRAAIELWSRSERLEMVGPLCAASLGSVVWPLGLTQLVLDTDFHIPME 153
BLAST of mRNA_E-fasciculatus_F_contig142.3069.1 vs. uniprot
Match: D7FTK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK8_ECTSI) HSP 1 Score: 132 bits (333), Expect = 1.310e-31 Identity = 70/139 (50.36%), Postives = 91/139 (65.47%), Query Frame = 1
Query: 1 GRSRCLDAFVVALSQACEGGKKRWYASTLELQLTSLDMCRASRSTSILHVRVNDETPSSLWHSRTTEARPNTPSPELCMSSRVPVVRALRLTWTLSMEDLLTTAAVELWTWSQRLELQGSSCAADLGGVVWPQRLTQLV 417
G LD +VAL+QAC+G +KRWY STLELQL SL++C A RS +LHV V ++TP +LW SRT+ P+ SPE+C S+RVP V+AL TW L M+ L AA E ++R G S AA + VVWP+ L +LV
Sbjct: 85 GGGSSLDTLIVALNQACDGQEKRWYVSTLELQLVSLELCGACRSAQLLHVFVREDTPPTLWSSRTSRTTPSQRSPEVCTSNRVPAVQALCWTWALPMDRLPQRAAAEPQPVTERRLQDGHSFAASVESVVWPESLKRLV 223
BLAST of mRNA_E-fasciculatus_F_contig142.3069.1 vs. uniprot
Match: A0A6H5KNI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI6_9PHAE) HSP 1 Score: 140 bits (353), Expect = 2.410e-31 Identity = 74/146 (50.68%), Postives = 93/146 (63.70%), Query Frame = 1
Query: 1 GRSRCLDAFVVALSQACEGGKKRWYASTLELQLTSLDMCRASRSTSILHVRVNDETPSSLWHSRTTEARPNTPSPELCMSSRVPVVRALRLTWTLSMEDLLTTAAVELWTWSQRLELQGSSCAADLGGVVWPQRLTQLVLQTDSDI 438
G S+CLDAFVVAL+QAC+G +KRWY STLELQL SL++C A R LHVRV +TP SLW N SP++C+SSRVPVV+A LTW L M L +A E+ + S S AA L VWPQRL ++V ++D +
Sbjct: 5 GNSKCLDAFVVALNQACDGQEKRWYVSTLELQLVSLEVCGACRRVQTLHVRVKPQTPPSLWFPSQNHTTTNNRSPKVCISSRVPVVQAFGLTWALPMGVLQQRSATEVRSGSGCRRANTHSSAASLESAVWPQRLKRMVFESDMTV 150
BLAST of mRNA_E-fasciculatus_F_contig142.3069.1 vs. uniprot
Match: A0A6H5KLV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLV1_9PHAE) HSP 1 Score: 134 bits (336), Expect = 1.430e-30 Identity = 75/144 (52.08%), Postives = 93/144 (64.58%), Query Frame = 1
Query: 1 GRSRCLDAFVVALSQACEGGKKRWYASTLELQLTSLDMCRASRSTSILHVRVNDETPSSLWHSRTTEARPNTPSPELCMSSRVPVVRALRLTWTLSMEDLLTTAAVELWTWSQRLELQGSSCAADLGGVVWPQR-LTQLVLQTD 429
GRS CL AF+VAL+Q C G +KRWYASTLELQL SL+ C A R LHVRV+ +TP SLW + A S E C+S+RVP V+A LTW L ME LL T+AVEL + S+ + G+S A LG + W Q L +LV +D
Sbjct: 13 GRSECLRAFIVALNQTCNGQEKRWYASTLELQLVSLEFCGACRRVPTLHVRVDRQTPRSLWSPCKSHATTKKRSREACVSNRVPAVQASGLTWALDMEVLLQTSAVELRSRSKYRRVSGNSSTASLGSMFWLQMMLKRLVFDSD 156
BLAST of mRNA_E-fasciculatus_F_contig142.3069.1 vs. uniprot
Match: A0A6H5L1V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V9_9PHAE) HSP 1 Score: 132 bits (331), Expect = 1.400e-29 Identity = 73/137 (53.28%), Postives = 90/137 (65.69%), Query Frame = 1
Query: 10 RCLDAFVVALSQACEGGKKRWYASTLELQLTSLDMCRASRSTSILHVRVNDETPSSLWHSRTTEARPNTPSPELCMSSRVPVVRALRLTWTLSMEDLLTTAAVELWTWSQRLELQGSSCAADLGGVVWPQRLTQLVL 420
RCLDAFVVALSQ EGG+KRWY STL+LQL SL+ C A RST +LHV V+ ETP +LW +P S+RVP V+A+ LTW E L +A+ ELWT + L+LQ S C A+L VVWPQ L +LV+
Sbjct: 8 RCLDAFVVALSQCYEGGEKRWYTSTLQLQLASLEFCGACRSTPMLHVYVDAETPPTLWSL-------GQANPTAGTSTRVPAVQAVGLTWARPTESPLGSASSELWTRLESLQLQVSLCTANLDSVVWPQGLQRLVM 137
BLAST of mRNA_E-fasciculatus_F_contig142.3069.1 vs. uniprot
Match: A0A6H5KXX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXX4_9PHAE) HSP 1 Score: 117 bits (293), Expect = 3.430e-24 Identity = 74/176 (42.05%), Postives = 93/176 (52.84%), Query Frame = 1
Query: 1 GRSRCLDAFVVALSQACEGGKKRWYASTLELQLTSLDMCRASRSTSILHVRVNDETPSSLWHSRTTEARPNTPSPELC----------------------------MSSRVPVVRALRLTWTLSMEDLLTTAAVELWTWSQRLELQGSSCAADLGGVVWPQRLTQLVLQTDSDIAM 444
G SR DA ++A+SQA EG KRWY STLEL+L SL+ CRA R +HVRV+ TP SLW R +T S + +SSRVPV +AL LTW L E LL AVELWT + L+L+ S +DL V WPQ L +L L+T + A+
Sbjct: 5 GASRGFDALIIAISQAYEGRGKRWYTSTLELRLASLETCRACRRVPTIHVRVDANTPPSLWSPHAMPTRAHTRSSKTRAXXXXXXXXXXXXXXXXXXXXXXXXKARISSRVPVGQALGLTWALPTEILLQGVAVELWTKLEFLQLRESLSPSDLVSVAWPQNLKRLALETGFEAAI 180
BLAST of mRNA_E-fasciculatus_F_contig142.3069.1 vs. uniprot
Match: A0A6H5K8K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K9_9PHAE) HSP 1 Score: 117 bits (292), Expect = 6.060e-24 Identity = 66/146 (45.21%), Postives = 86/146 (58.90%), Query Frame = 1
Query: 1 GRSRCLDAFVVALSQACEGGKKRWYASTLELQLTSLDMCRASRSTSILHVRVNDETPSSLWHSRTTEARPNTPSPELCMSSRVPVVRALRLTWTLSMEDLLTTAAVELWTWSQRLELQGSSCAADLGGVVWPQRLTQLVLQTDSDI 438
GRS CLDAF+VAL QA +G KRWY STLELQL SL+ C A RS V+++ +TP SLW R + S E C+ SRVP V+A W L ME LL +A EL S+ + G S A G + W Q+LT+L+ ++ +
Sbjct: 25 GRSECLDAFIVALKQAGDGRAKRWYVSTLELQLVSLEFCGACRSALSFDVQIHRQTPHSLWSPRKSHGTLKKRSREACIPSRVPAVQANGWMWALPMEILLPRSATELHQVSENRQPTGPSSATSPGRMGWFQKLTRLMFYSERSV 170
BLAST of mRNA_E-fasciculatus_F_contig142.3069.1 vs. uniprot
Match: A0A6H5KVM8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVM8_9PHAE) HSP 1 Score: 104 bits (259), Expect = 3.960e-23 Identity = 54/86 (62.79%), Postives = 63/86 (73.26%), Query Frame = 1
Query: 1 GRSRCLDAFVVALSQACEGGKKRWYASTLELQLTSLDMCRASRSTSILHVRVNDETPSSLWHSRTTEARPNTPSPELCMSSRVPVV 258
G ++C DAFVVALSQACEGG KR Y STLEL L SLD+CRA RSTS LHVRV +TP S W + RP+ S ++ +SSRVPVV
Sbjct: 18 GPTQCFDAFVVALSQACEGGNKRSYTSTLELPLASLDICRAGRSTSTLHVRVQYQTPRSFWSPPKVQLRPDEGSSKIRLSSRVPVV 103
BLAST of mRNA_E-fasciculatus_F_contig142.3069.1 vs. uniprot
Match: D7G0Z9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Z9_ECTSI) HSP 1 Score: 91.7 bits (226), Expect = 2.330e-18 Identity = 44/65 (67.69%), Postives = 50/65 (76.92%), Query Frame = 1
Query: 4 RSRCLDAFVVALSQACEGGKKRWYASTLELQLTSLDMCRASRSTSILHVRVNDETPSSLWHSRTT 198
RS+CLDAFVVAL+Q C+G +KRWYASTLELQL SL+ C A R LHVRV+ TP SLW RTT
Sbjct: 38 RSKCLDAFVVALNQTCDGQEKRWYASTLELQLVSLEFCGACRHVPTLHVRVDRRTPRSLWSPRTT 102 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig142.3069.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig142.3069.1 >prot_E-fasciculatus_F_contig142.3069.1 ID=prot_E-fasciculatus_F_contig142.3069.1|Name=mRNA_E-fasciculatus_F_contig142.3069.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=609bp GRSRCLDAFVVALSQACEGGKKRWYASTLELQLTSLDMCRASRSTSILHVback to top mRNA from alignment at E-fasciculatus_F_contig142:29145..30971- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig142.3069.1 ID=mRNA_E-fasciculatus_F_contig142.3069.1|Name=mRNA_E-fasciculatus_F_contig142.3069.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1827bp|location=Sequence derived from alignment at E-fasciculatus_F_contig142:29145..30971- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig142:29145..30971- >mRNA_E-fasciculatus_F_contig142.3069.1 ID=mRNA_E-fasciculatus_F_contig142.3069.1|Name=mRNA_E-fasciculatus_F_contig142.3069.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3654bp|location=Sequence derived from alignment at E-fasciculatus_F_contig142:29145..30971- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |