mRNA_E-fasciculatus_F_contig142.3067.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig142.3067.1 vs. uniprot
Match: D7FWG4_ECTSI (Aminoacyl-tRNA hydrolase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWG4_ECTSI) HSP 1 Score: 305 bits (780), Expect = 1.690e-104 Identity = 147/153 (96.08%), Postives = 151/153 (98.69%), Query Frame = 1
Query: 31 RREPVSRGDADFEDEFEEEERALQSNGGARAWSLDDGPFKLVLIVNMQLKMGKGKAMAQCCHATLGNYRISERHCPSALRGWEQMGQAKICVKCPTETELYDIQAKAQAAGLVNYLVMDAGHTQIAAGSRTVLALGPAPVWAFEGISSHLKLM 489
RREPVSRGDA+FE+EFEEEERALQSNGGARAWSLDDGPFKLVLIVNMQLKMGKGK +AQCCHATLGNYRISERHCPSALRGWE MGQAKICVKCPTETELYDIQAKAQ+AGLVNYLVMDAGHTQIAAGSRTVLALGPAPVWAFEGISSHLKLM
Sbjct: 10 RREPVSRGDAEFEEEFEEEERALQSNGGARAWSLDDGPFKLVLIVNMQLKMGKGKVVAQCCHATLGNYRISERHCPSALRGWEHMGQAKICVKCPTETELYDIQAKAQSAGLVNYLVMDAGHTQIAAGSRTVLALGPAPVWAFEGISSHLKLM 162
BLAST of mRNA_E-fasciculatus_F_contig142.3067.1 vs. uniprot
Match: A0A836C8I9_9STRA (Aminoacyl-tRNA hydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8I9_9STRA) HSP 1 Score: 181 bits (459), Expect = 4.280e-55 Identity = 81/124 (65.32%), Postives = 100/124 (80.65%), Query Frame = 1
Query: 118 RAWSLDDGPFKLVLIVNMQLKMGKGKAMAQCCHATLGNYRISERHCPSALRGWEQMGQAKICVKCPTETELYDIQAKAQAAGLVNYLVMDAGHTQIAAGSRTVLALGPAPVWAFEGISSHLKLM 489
R W++DDGPFKLVL+VN +LKMGKGK AQCCHATLG Y+ + RH P+ ++ WE + QAKICVKCP E+E++ I+ KA+AAGLV Y+V DAG TQI +GSRTVL +GPAP AF GI+ HLKLM
Sbjct: 77 RDWTIDDGPFKLVLVVNSELKMGKGKVAAQCCHATLGCYKTARRHAPNCVKSWEYLAQAKICVKCPEESEMWQIREKAEAAGLVTYMVADAGRTQIPSGSRTVLGIGPAPETAFLGITDHLKLM 200
BLAST of mRNA_E-fasciculatus_F_contig142.3067.1 vs. uniprot
Match: A0A7S3MCE7_9STRA (Aminoacyl-tRNA hydrolase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MCE7_9STRA) HSP 1 Score: 168 bits (425), Expect = 4.100e-50 Identity = 77/123 (62.60%), Postives = 97/123 (78.86%), Query Frame = 1
Query: 121 AWSLDDGPFKLVLIVNMQLKMGKGKAMAQCCHATLGNYRISERHCPSALRGWEQMGQAKICVKCPTETELYDIQAKAQAAGLVNYLVMDAGHTQIAAGSRTVLALGPAPVWAFEGISSHLKLM 489
+++ +DGPFKL+L VN L MGKGK AQCCHATLG Y+I+ ++C +A+ WE GQAK+ VK TE E+ D+QAKA AAGLV Y V D G TQIAAGSRTVLA+GPAP +AF+G++SHLKL+
Sbjct: 65 SYTEEDGPFKLILCVNNSLSMGKGKVAAQCCHATLGAYKIAIKYCQTAVENWEDDGQAKVAVKVDTEAEMADLQAKAMAAGLVTYFVQDEGRTQIAAGSRTVLAIGPAPAYAFQGLTSHLKLL 187
BLAST of mRNA_E-fasciculatus_F_contig142.3067.1 vs. uniprot
Match: A0A7S0XWF5_HEMAN (Aminoacyl-tRNA hydrolase n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0XWF5_HEMAN) HSP 1 Score: 158 bits (399), Expect = 6.340e-47 Identity = 75/129 (58.14%), Postives = 96/129 (74.42%), Query Frame = 1
Query: 103 SNGGARAWSLDDGPFKLVLIVNMQLKMGKGKAMAQCCHATLGNYRISERHCPSALRGWEQMGQAKICVKCPTETELYDIQAKAQAAGLVNYLVMDAGHTQIAAGSRTVLALGPAPVWAFEGISSHLKLM 489
+ G +WS+ DGP K+VL+VN +LKMGKGK AQC HATLG Y+ + P LR WE +GQAKICV+CPTE E++++ KA+A GL+ Y V DAG TQI AGSRTVLA+GPAP AF+G++ H KL+
Sbjct: 6 AGGTQGSWSVVDGPGKMVLVVNQELKMGKGKIAAQCGHATLGAYKKAS---PQVLRMWEGLGQAKICVQCPTEAEMHEVADKARAKGLITYQVTDAGRTQIPAGSRTVLAIGPAPESAFKGVTDHFKLL 131
BLAST of mRNA_E-fasciculatus_F_contig142.3067.1 vs. uniprot
Match: A0A7S4K0G8_9STRA (Aminoacyl-tRNA hydrolase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K0G8_9STRA) HSP 1 Score: 159 bits (401), Expect = 2.260e-46 Identity = 75/125 (60.00%), Postives = 90/125 (72.00%), Query Frame = 1
Query: 115 ARAWSLDDGPFKLVLIVNMQLKMGKGKAMAQCCHATLGNYRISERHCPSALRGWEQMGQAKICVKCPTETELYDIQAKAQAAGLVNYLVMDAGHTQIAAGSRTVLALGPAPVWAFEGISSHLKLM 489
AR W +++ P+K+VL VN LKMGKGK AQCCHA +G Y+ + + CP +R WEQ G AKI VKCP + E+ I A G+ YLV DAG TQIAAGSRTVL LGPAPV AFEG++SHLKLM
Sbjct: 71 ARLWGMNNAPYKMVLCVNQDLKMGKGKIAAQCCHAAVGCYKRARKVCPDGVRAWEQTGCAKIAVKCPNQDEIEVILVAAHKRGIPLYLVADAGRTQIAAGSRTVLGLGPAPVSAFEGVTSHLKLM 195
BLAST of mRNA_E-fasciculatus_F_contig142.3067.1 vs. uniprot
Match: K0SKQ3_THAOC (Aminoacyl-tRNA hydrolase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SKQ3_THAOC) HSP 1 Score: 158 bits (400), Expect = 2.440e-46 Identity = 77/141 (54.61%), Postives = 100/141 (70.92%), Query Frame = 1
Query: 67 EDEFEEEERALQSNGGARAWSLDDGPFKLVLIVNMQLKMGKGKAMAQCCHATLGNYRISERHCPSALRGWEQMGQAKICVKCPTETELYDIQAKAQAAGLVNYLVMDAGHTQIAAGSRTVLALGPAPVWAFEGISSHLKLM 489
ED +++ ++N + AW + D P+K+VL VN L MGKGK AQC HA +G Y+ ++RHC + L WE+ G AKI VKCP+E E+ +I AKA + G+ YLV DAG TQIAAGSRTVL LGPAPV F+G+S+HLKLM
Sbjct: 46 EDWDSDDDGPAEANCPSSAWGISDAPYKMVLCVNTSLSMGKGKIAAQCGHAAVGCYKRAKRHCQAGLSAWERTGCAKIAVKCPSEDEMDEIAAKALSRGIPIYLVEDAGRTQIAAGSRTVLGLGPAPVREFDGVSNHLKLM 186
BLAST of mRNA_E-fasciculatus_F_contig142.3067.1 vs. uniprot
Match: A0A7S2MVX1_9STRA (Aminoacyl-tRNA hydrolase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MVX1_9STRA) HSP 1 Score: 158 bits (399), Expect = 7.980e-46 Identity = 84/161 (52.17%), Postives = 103/161 (63.98%), Query Frame = 1
Query: 7 LHFRCPPHRREPVSRGDADFEDEFEEEERALQSNGGARAWSLDDGPFKLVLIVNMQLKMGKGKAMAQCCHATLGNYRISERHCPSALRGWEQMGQAKICVKCPTETELYDIQAKAQAAGLVNYLVMDAGHTQIAAGSRTVLALGPAPVWAFEGISSHLKLM 489
L FR E + D++ +DE+E A N ++ W + GP+K+VL VN +L MGKGK AQCCHA +G Y+ S + CP+ L+ WE+ G AKI +KCP E EL I KA G+ YLV DAG TQI AGSRTVL LGPAPV FEGIS HLKLM
Sbjct: 57 LFFRGMKDTEEMNNDSDSESDDEYEVGGGA---NVSSKEWGMMHGPYKMVLCVNQELGMGKGKIAAQCCHAAVGCYKRSLKQCPNGLKAWERTGCAKIALKCPNEQELTSILEKAYNKGIPCYLVEDAGRTQIKAGSRTVLGLGPAPVDVFEGISDHLKLM 214
BLAST of mRNA_E-fasciculatus_F_contig142.3067.1 vs. uniprot
Match: A0A7S4VM04_9STRA (Aminoacyl-tRNA hydrolase n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VM04_9STRA) HSP 1 Score: 159 bits (401), Expect = 1.510e-45 Identity = 77/129 (59.69%), Postives = 92/129 (71.32%), Query Frame = 1
Query: 103 SNGGARAWSLDDGPFKLVLIVNMQLKMGKGKAMAQCCHATLGNYRISERHCPSALRGWEQMGQAKICVKCPTETELYDIQAKAQAAGLVNYLVMDAGHTQIAAGSRTVLALGPAPVWAFEGISSHLKLM 489
+N A W + P+K+VL VN +LKMG GK MAQC HA +G Y+ S + CP+AL+ WE+ G AKI VKCP ETEL I KA + G+ YLV DAG TQIAAGSRTVL LGPAPV FEG++ HLKLM
Sbjct: 133 ANVAASQWGIMHAPYKMVLCVNQELKMGPGKKMAQCSHAAVGCYKRSLKQCPAALKAWERTGCAKIAVKCPNETELISILEKAHSKGIPCYLVEDAGRTQIAAGSRTVLGLGPAPVDVFEGVTDHLKLM 261
BLAST of mRNA_E-fasciculatus_F_contig142.3067.1 vs. uniprot
Match: L1JZ89_GUITC (Aminoacyl-tRNA hydrolase (Fragment) n=2 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JZ89_GUITC) HSP 1 Score: 153 bits (387), Expect = 2.330e-45 Identity = 71/112 (63.39%), Postives = 89/112 (79.46%), Query Frame = 1
Query: 154 VLIVNMQLKMGKGKAMAQCCHATLGNYRISERHCPSALRGWEQMGQAKICVKCPTETELYDIQAKAQAAGLVNYLVMDAGHTQIAAGSRTVLALGPAPVWAFEGISSHLKLM 489
VL+VN +LKMGKGK AQC HA LG Y+ +++ PSAL WE+ GQAKICV+CPTE E+++I KA A GL+ Y+VMDAG TQIAAGSRTVLA+GPAP F+G++ HLKL+
Sbjct: 1 VLVVNQELKMGKGKIAAQCGHAVLGAYKRGKKYAPSALTWWEKFGQAKICVQCPTEDEMWEIAKKAGAKGLITYIVMDAGRTQIAAGSRTVLAIGPAPEQQFKGLTDHLKLL 112
BLAST of mRNA_E-fasciculatus_F_contig142.3067.1 vs. uniprot
Match: A0A7S2YD90_9STRA (Aminoacyl-tRNA hydrolase n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YD90_9STRA) HSP 1 Score: 150 bits (378), Expect = 5.080e-43 Identity = 73/130 (56.15%), Postives = 91/130 (70.00%), Query Frame = 1
Query: 100 QSNGGARAWSLDDGPFKLVLIVNMQLKMGKGKAMAQCCHATLGNYRISERHCPSALRGWEQMGQAKICVKCPTETELYDIQAKAQAAGLVNYLVMDAGHTQIAAGSRTVLALGPAPVWAFEGISSHLKLM 489
+ + A W + + P+K+VL VN L MGKGK AQCCHA +G Y+ + + P+A++ WE G AKI VKCP+E E+ I AKA + G+ YLV DAG TQIAAGSRTVL LGPAPV FEG+S HLKLM
Sbjct: 56 EPSADASKWGMFNSPYKMVLCVNTSLSMGKGKIAAQCCHAAVGCYKRANKTIPNAVKAWECTGCAKIAVKCPSEEEMDLICAKAMSKGIPVYLVEDAGRTQIAAGSRTVLGLGPAPVSVFEGVSDHLKLM 185 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig142.3067.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig142.3067.1 >prot_E-fasciculatus_F_contig142.3067.1 ID=prot_E-fasciculatus_F_contig142.3067.1|Name=mRNA_E-fasciculatus_F_contig142.3067.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=164bp MGLHFRCPPHRREPVSRGDADFEDEFEEEERALQSNGGARAWSLDDGPFKback to top mRNA from alignment at E-fasciculatus_F_contig142:20295..22237+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig142.3067.1 ID=mRNA_E-fasciculatus_F_contig142.3067.1|Name=mRNA_E-fasciculatus_F_contig142.3067.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1943bp|location=Sequence derived from alignment at E-fasciculatus_F_contig142:20295..22237+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig142:20295..22237+ >mRNA_E-fasciculatus_F_contig142.3067.1 ID=mRNA_E-fasciculatus_F_contig142.3067.1|Name=mRNA_E-fasciculatus_F_contig142.3067.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=984bp|location=Sequence derived from alignment at E-fasciculatus_F_contig142:20295..22237+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |