prot_E-fasciculatus_F_contig142.3066.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig142.3066.1
Unique Nameprot_E-fasciculatus_F_contig142.3066.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length103
Homology
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BLAST of mRNA_E-fasciculatus_F_contig142.3066.1 vs. uniprot
Match: A0A6H5JIK3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JIK3_9PHAE)

HSP 1 Score: 153 bits (387), Expect = 1.730e-46
Identity = 88/104 (84.62%), Postives = 91/104 (87.50%), Query Frame = 0 
Query:    1 MNAEPAVADN--RERPDEVQIGVVVVPLVLSAALVTAVVTYRCFANRLRRDRLALERQEEVEEIRAARGREEAGEGGSTHRSAAMAGLGKDQYMSAYKNLLTQA 102
            MNAE A AD    E PDEVQIGV+V+PLVLSAALVT VV YRCFANRLRRDRLALERQ EVEEIRAARGREEAGEGGS HRSAAMAGLG+DQYMSAYK LL QA
Sbjct:    1 MNAELAAADTLRSEGPDEVQIGVIVLPLVLSAALVTVVVAYRCFANRLRRDRLALERQAEVEEIRAARGREEAGEGGSPHRSAAMAGLGEDQYMSAYKKLLAQA 104
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig142.3066.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JIK3_9PHAE1.730e-4684.62Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 19..42
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..18
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 43..102
NoneNo IPR availableTMHMMTMhelixcoord: 20..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig142contigE-fasciculatus_F_contig142:14715..16445 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig142.3066.1mRNA_E-fasciculatus_F_contig142.3066.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig142 14715..17553 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig142.3066.1 ID=prot_E-fasciculatus_F_contig142.3066.1|Name=mRNA_E-fasciculatus_F_contig142.3066.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=103bp
MNAEPAVADNRERPDEVQIGVVVVPLVLSAALVTAVVTYRCFANRLRRDR
LALERQEEVEEIRAARGREEAGEGGSTHRSAAMAGLGKDQYMSAYKNLLT
QA*
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