prot_E-fasciculatus_F_contig1419.3060.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1419.3060.1
Unique Nameprot_E-fasciculatus_F_contig1419.3060.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length185
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1419.3060.1 vs. uniprot
Match: D7FR63_ECTSI (EF-hand domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR63_ECTSI)

HSP 1 Score: 327 bits (837), Expect = 3.570e-111
Identity = 174/185 (94.05%), Postives = 179/185 (96.76%), Query Frame = 0 
Query:    1 MLGRRLFVGVLSLATSVMVAGYDDSRPMNEDEYFGARMQEHHQGAGLYQEPQGSSKLVLLAGAIAGASIEWWWSARSAKKGNKLLDQESAAFMAEWNKERDALMARRTYPIKLLAHEVEEAEVQLMQLVAAAEDAGVDLGAGGGSGLGGGAAQRPKARSIQQDNMEYEEFKQPDADGDNVISKTE 185
            MLGRR+FV VLSLATSVMVAGYDD RPMNEDEYFGARMQEHHQGAGLYQEPQGS+KLVLLAGAIAGASIEWWWSARSAKKGNKLL+QESAAF+AEWNKERDALMARRTYPIKLLAHEVEEA+VQLMQLVAAAEDAGVDLGAGG SGLGGGA  RPKARSIQQDNMEYEEFKQPD DGDNVISKTE
Sbjct:    1 MLGRRVFVCVLSLATSVMVAGYDD-RPMNEDEYFGARMQEHHQGAGLYQEPQGSNKLVLLAGAIAGASIEWWWSARSAKKGNKLLEQESAAFIAEWNKERDALMARRTYPIKLLAHEVEEADVQLMQLVAAAEDAGVDLGAGG-SGLGGGAT-RPKARSIQQDNMEYEEFKQPDTDGDNVISKTE 182
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1419.3060.1 vs. uniprot
Match: A0A836CPR7_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPR7_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 7.760e-16
Identity = 59/177 (33.33%), Postives = 91/177 (51.41%), Query Frame = 0 
Query:   10 VLSLATSVMVAGYDDSRPMNEDEYFGARMQEHHQGAGLYQEPQGSSKLVLLAGAIAGASIEWWWSARSAKKGNKLLDQESAAFMAE-WNKERDALMARRTYPIKLLAHEVEEAEVQLMQLVAAAEDAGVDLGAGGGSGLGGGAAQRPKARSIQQDNMEYEEFKQPDADGDNVISKTE 185
            VL LA +V+ + +D      E+EYF ARM++  +  GLYQEPQ    ++ L G + G  +      R A +  KL  +     +A+   K R+A + ++   +  L   VE+AE+++ +L  AA DAG+D+                   S  Q  ++YEEFKQPDA+ DN IS+ E
Sbjct:   13 VLLLALAVVRSQWDGGMDPREEEYFAARMRQPQRQGGLYQEPQRKQSMLPLVGGLVGGWLLDMQLTRKADRKRKLSHEHDKKALAQRLQKHRNAEVNKKLVNLANLEALVEDAELRIEELQQAAVDAGMDI-------------------SATQAEVDYEEFKQPDANHDNRISRAE 170
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1419.3060.1 vs. uniprot
Match: A0A835YQF0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQF0_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 1.740e-14
Identity = 63/176 (35.80%), Postives = 93/176 (52.84%), Query Frame = 0 
Query:   12 SLATSVMV-AGYDDSRPMNEDEYFGARMQEHHQGAGLYQEP-QGSSKLVLLAGAIAGASIEWWWSARSAKKGNKLLDQESAAFMAEWNKERDALMARRTYPIKLLAHEVEEAEVQLMQLVAAAEDAGVDLGAGGGSGLGGGAAQRPKARSIQQDNMEYEEFKQPDADGDNVISKTE 185
            +LAT   V A +D      EDEYFGARM++  QG  LYQEP +G   L  L G + G  ++   + R+AKK  K  D +  A  A+  + RD  + +R   +  L  +V++AE+++ +L  AA DAG+DLG                     Q  ++Y EFKQPDA+ D+ I++ E
Sbjct:    3 ALATCAAVQAQWDGGLNPREDEYFGARMRQG-QGRNLYQEPAKGPGVLPYLGGILGGFLVDRHLTKRAAKKLAKGYDADRKALEAKLVRIRDDEITKRLKILTNLEVQVQDAELRIEELQQAAVDAGMDLGE-------------------TQTEVDYAEFKQPDANNDDRITRAE 158
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1419.3060.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FR63_ECTSI3.570e-11194.05EF-hand domain-containing protein n=2 Tax=Ectocarp... [more]
A0A836CPR7_9STRA7.760e-1633.33EF-hand domain-containing protein n=1 Tax=Tribonem... [more]
A0A835YQF0_9STRA1.740e-1435.80Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 111..131
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 74..185
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 57..73
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..56
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.725

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1419contigE-fasciculatus_F_contig1419:13141..18043 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1419.3060.1mRNA_E-fasciculatus_F_contig1419.3060.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1419 13141..18043 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1419.3060.1 ID=prot_E-fasciculatus_F_contig1419.3060.1|Name=mRNA_E-fasciculatus_F_contig1419.3060.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=185bp
MLGRRLFVGVLSLATSVMVAGYDDSRPMNEDEYFGARMQEHHQGAGLYQE
PQGSSKLVLLAGAIAGASIEWWWSARSAKKGNKLLDQESAAFMAEWNKER
DALMARRTYPIKLLAHEVEEAEVQLMQLVAAAEDAGVDLGAGGGSGLGGG
AAQRPKARSIQQDNMEYEEFKQPDADGDNVISKTE
back to top