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Homology
BLAST of mRNA_E-fasciculatus_F_contig1419.3060.1 vs. uniprot
Match: D7FR63_ECTSI (EF-hand domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR63_ECTSI) HSP 1 Score: 327 bits (837), Expect = 3.570e-111 Identity = 174/185 (94.05%), Postives = 179/185 (96.76%), Query Frame = 1
Query: 1 MLGRRLFVGVLSLATSVMVAGYDDSRPMNEDEYFGARMQEHHQGAGLYQEPQGSSKLVLLAGAIAGASIEWWWSARSAKKGNKLLDQESAAFMAEWNKERDALMARRTYPIKLLAHEVEEAEVQLMQLVAAAEDAGVDLGAGGGSGLGGGAAQRPKARSIQQDNMEYEEFKQPDADGDNVISKTE 555
MLGRR+FV VLSLATSVMVAGYDD RPMNEDEYFGARMQEHHQGAGLYQEPQGS+KLVLLAGAIAGASIEWWWSARSAKKGNKLL+QESAAF+AEWNKERDALMARRTYPIKLLAHEVEEA+VQLMQLVAAAEDAGVDLGAGG SGLGGGA RPKARSIQQDNMEYEEFKQPD DGDNVISKTE
Sbjct: 1 MLGRRVFVCVLSLATSVMVAGYDD-RPMNEDEYFGARMQEHHQGAGLYQEPQGSNKLVLLAGAIAGASIEWWWSARSAKKGNKLLEQESAAFIAEWNKERDALMARRTYPIKLLAHEVEEADVQLMQLVAAAEDAGVDLGAGG-SGLGGGAT-RPKARSIQQDNMEYEEFKQPDTDGDNVISKTE 182
BLAST of mRNA_E-fasciculatus_F_contig1419.3060.1 vs. uniprot
Match: A0A836CPR7_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPR7_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 7.760e-16 Identity = 59/177 (33.33%), Postives = 91/177 (51.41%), Query Frame = 1
Query: 28 VLSLATSVMVAGYDDSRPMNEDEYFGARMQEHHQGAGLYQEPQGSSKLVLLAGAIAGASIEWWWSARSAKKGNKLLDQESAAFMAE-WNKERDALMARRTYPIKLLAHEVEEAEVQLMQLVAAAEDAGVDLGAGGGSGLGGGAAQRPKARSIQQDNMEYEEFKQPDADGDNVISKTE 555
VL LA +V+ + +D E+EYF ARM++ + GLYQEPQ ++ L G + G + R A + KL + +A+ K R+A + ++ + L VE+AE+++ +L AA DAG+D+ S Q ++YEEFKQPDA+ DN IS+ E
Sbjct: 13 VLLLALAVVRSQWDGGMDPREEEYFAARMRQPQRQGGLYQEPQRKQSMLPLVGGLVGGWLLDMQLTRKADRKRKLSHEHDKKALAQRLQKHRNAEVNKKLVNLANLEALVEDAELRIEELQQAAVDAGMDI-------------------SATQAEVDYEEFKQPDANHDNRISRAE 170
BLAST of mRNA_E-fasciculatus_F_contig1419.3060.1 vs. uniprot
Match: A0A835YQF0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQF0_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 1.740e-14 Identity = 63/176 (35.80%), Postives = 93/176 (52.84%), Query Frame = 1
Query: 34 SLATSVMV-AGYDDSRPMNEDEYFGARMQEHHQGAGLYQEP-QGSSKLVLLAGAIAGASIEWWWSARSAKKGNKLLDQESAAFMAEWNKERDALMARRTYPIKLLAHEVEEAEVQLMQLVAAAEDAGVDLGAGGGSGLGGGAAQRPKARSIQQDNMEYEEFKQPDADGDNVISKTE 555
+LAT V A +D EDEYFGARM++ QG LYQEP +G L L G + G ++ + R+AKK K D + A A+ + RD + +R + L +V++AE+++ +L AA DAG+DLG Q ++Y EFKQPDA+ D+ I++ E
Sbjct: 3 ALATCAAVQAQWDGGLNPREDEYFGARMRQG-QGRNLYQEPAKGPGVLPYLGGILGGFLVDRHLTKRAAKKLAKGYDADRKALEAKLVRIRDDEITKRLKILTNLEVQVQDAELRIEELQQAAVDAGMDLGE-------------------TQTEVDYAEFKQPDANNDDRITRAE 158
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 331.3 |
| Seed ortholog evalue | 3e-88 |
| Seed eggNOG ortholog | 2880.D7FR63 |
| EggNOG free text desc. | EF-hand domain pair |
| EggNOG OGs | 2E463@1,2SB4A@2759 |
| COG Functional cat. | Z |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| Hectar predicted targeting category | signal peptide |
| Ec32 ortholog description | EF-hand domain pair |
| Ec32 ortholog | Ec-08_005250.1 |
| Exons | 5 |
| Model size | 555 |
| Cds size | 555 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1419.3060.1 >prot_E-fasciculatus_F_contig1419.3060.1 ID=prot_E-fasciculatus_F_contig1419.3060.1|Name=mRNA_E-fasciculatus_F_contig1419.3060.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=185bp
MLGRRLFVGVLSLATSVMVAGYDDSRPMNEDEYFGARMQEHHQGAGLYQE PQGSSKLVLLAGAIAGASIEWWWSARSAKKGNKLLDQESAAFMAEWNKER DALMARRTYPIKLLAHEVEEAEVQLMQLVAAAEDAGVDLGAGGGSGLGGG AAQRPKARSIQQDNMEYEEFKQPDADGDNVISKTE back to topmRNA from alignment at E-fasciculatus_F_contig1419:13141..18043+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-fasciculatus_F_contig1419.3060.1 ID=mRNA_E-fasciculatus_F_contig1419.3060.1|Name=mRNA_E-fasciculatus_F_contig1419.3060.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4903bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1419:13141..18043+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female) ATGCTCGGACGGCGATTGTTTGTGGGCGTGCTGTCCCTGGCGACATCGGT
CATGGTGGCGGGATACGACGACAGGTGCGATGGAGCGTCGCAGGACGGCG
GGGAAGTTCCCGACGCTGCTTGTGGCATGGAGGGGGCATTTGGGATTTGA
AAGTATCTGCCAAGAAAAGATGCATGGGCACATAATTGTGTCGTGGGGAG
CTGCAACAGGGGGTCGCTCGCTCTACACATACCGCTCATCTTTGTCATGA
GACAGAGCAGAGGGCGAGGGTGCGTTGCTCAAGAGTCGGCGAGGAGACAC
TTGCCCCATGATCGTGTAACTTAGCGCTTGGTGTTCCACCGTGGCCGTTG
ATTGCTGGGCCCTTCTGCCCTTGTTGACCCGGTTGGTTGTGGCACACGCG
GGCTGATACGTGTCGCGACCAGAGCCGTCTGTGTTGCCCCGATCAAAAGG
GCATAGTCTAAGCATGTTCACCCCCGGCCTGCGGTCTCTCCTCCTCTCGC
TTTGTCCCCGCCCTCGTACAACCAAGCTACAACCAAGCTGGCTTCTTACG
AGTGCTCCGATTAGGCCCTGTCGAGTGAACATCCCCAGAGGATAGAGAGA
CTTTACTTTTTTGGCAAAATATGTTGGGTGCCTCTATGGCCTCCCGCAGG
ATAGAGCAAACCTCAACCTCCCAGCAGAAATTGAAACAGATTTGACATTT
CTTCATGTGGGCGTTGTGTGCTGCAACACGCGCGGTGCGGCATCCTGTAT
CCTGTCCATATGTAGGAAGAAGGAAGACCCCCTGCAGCCTTAATGGTGTG
CATGTACACGACGCGGTTCCACGCTGGGTTGCTTTTACACAAGTGTAGAG
CTTCGAAGGCGGGTAAAAAGTCCATTGTATTAATAGTAATCTTGCCACAC
GCCGGTATGTACTTGTACTTGTAGGGGGGATGGATGCGATGATGCGATGG
TTTCTTGAGACTTGAGACGGACAATCTCCGAAACTGAGATGGGAGCACTG
CTGTGCCCAGCAGCGCGCGCTCGCCAAAGAGAATATCTACAAGCTTTGGA
GGGACATGAGCCTTCGCGAACGAATGGTGGATGTGTATGTAACCAGCACA
AACCACTCTGCTTTTGTTGTTTTTACTTTGGACCTTCATTTTCCACAGCA
GTTCTATACATTAGGAGAAAGAGTTAGCACCGCCGTCCTTACGGTGAGGA
GGATATGGGGAAGGACGGGTAATATTGGGGTATTGGGATGGAGAACGACA
AAGCAAACCCAATATACATCTAGGGCGGGTAGAGTTCTTCCTTGGTGCTG
TGTAAACCTAATAAATTTTGTTAAATTTGTGAAGGTTGTCAAATTTTGGA
CGTTTTGTAACCCCCGCACGTGCTAAACATCCATCTTTTGGGGGCTAAAC
GCGGTCATGAGGGGCTGTTCAGACGGTGGTGTGCTTCATGGAGAAAATCT
ATCTGATCTAGACCCGAAACTAACCGGTAATAATCCATGTACTGCTGTGC
CTTGGGCACAGCCCAATCCGTCCCATACAGCAGTATAACCGCAATTGTTC
GACTGCAAACGACAGCAGTCAAGTTGTTGTCCGCCCCGAAATTAATGTGA
TGAGACAGAGAAACGGAGGCGGGGGAGGGGACGCAATCACCGAGCATGTT
AAAGTCAAGGAAGACAATTGACAAACGCTCCGTCTGTTCTGTTTCTTGTG
CGTCTGCGCTTGCGGCCGGGCACATCATCTGTGATTCGCTCAAACGATCT
ACCGCCGCTACTCCGGGTATATGTGGGTGTGGGGGGGTTCGGTGGTGGGG
GGGGGGGCACGCGGTGTAAACGAAAGCAGACCAATGAATGAAGACGAATA
CTTCGGGGCCCGCATGCAAGAACATCACCAGGGGGCGGGATTATACCAAG
AACCACAAGGGTAAGCTGTTGTCGCCATCGTCGTCTTCACTTTTTAACAA
TGGTTCCGGTCTCTACTTGAGTAGAGTACCAATAATATTCGTGCTGGTTC
CAACTGGCGTTAAGGCGACAGGTTTGCGTAAAAGGTTTGATTATTGTGTC
AGCGCATCGAAGTCTGTGCAATATACAGTAGGCGCTTAGAGAGAGACGAA
GGTCCATGTTACCCACAGAAGGACTTGAACCCAAAGGGACTTGTATTTAG
CCAAGACGGCCGGACTAGTCAAGGGAAGAGAGGTGAGCGAGGTTGCGCCT
AAGAATGAAAGTAGAGAGAGGATTGGATAGATAGCGAACACAAACCGGAC
TGTTCAAGCCCAGAAAAGAAAGGTGAGCGGGTTTGCGCGAAATAATGTAA
ATTGATTTGTATCTAGCCAGACGGACGGACTAGTCAAGTTCAGAGAAGAG
AGGTGAGCAGGTTTGCGCTGAAGAATGTAAAAGACTTGTTTAGACGAACG
GACTTGTCAAGTTCAGAGAATAAGCGGGTTTGCGCCAAAGAATGAAGTGG
ATTCGGAAAGTTGTAGAGAGAGGAGTGGATCCATGATCGAGATATGCATT
GGCTGTGTCGAAAGGCGTAGGTAGATGGGCGGGAGAGACGAGTGGACTGA
TGGGAGAGAACAGCGGAGAAAGTGAGGGGTCAAGCTGGCGATAGCGGACA
AGAATGGATACAGAGAGGTCGGATGTATTTGACTTAAAGAGGAAAGCAGG
TGAAAAGGTGACAGAGGGCTTGGTTGATGAGATGCTAGTGGGTTAACTCG
AGCCGATTTTCTGCTCGGGCCGGTACCAAAAACTTGAGGAGCCACCAAGA
GGCGCAACAGAGCAATAGCGAGAGAGAGAGTAATCGATGGGGTAGAAGAG
GAACCGGTTGACTAGCATAAGCCGGAGGGTTCTGTAGAGGGCGGGCCTGC
GCTAAACATAATGTGTTAGAGCGACGATTATGAAAGAAGCCGCATCGACG
CTCCCCCAATAGTCACTCAATTGTATACAAAGCAGCTTCAGGCTGTTGCT
CATCGCTGAAGAGATGGCAAGTCTTTTTTTTTTTGGTGCGAATATCAACT
ACCGACCGCACTGCCACCGATTCGTTGTTGTTCTTGTTGCGCGCAGCTGC
GAAGTGTAAGTGTAGTTGTGTTATCCCCTGCCCTCCCCCGTGCGCCTCGT
TGCTTACGCGCAATCACGAATGTGAAATAACTCGTGATATATCATTGGTA
TGCGCGATGTGGACGCGGCGTGATGTGATTTGACGCGATGCGACATGATG
TGATTTGAGTTCATGCGACGTGATGTGATGTGATTTGAAATGATGCGACG
TGATGTAATTTGACGTGATGCGACGTGATATGACTGACGTGATGTGATGT
GTGACGTGGTGATTTGACGTGATCTGGCGCCACAGGAGTAGCAAGCTAGT
CCTCCTTGCCGGAGCGATCGCGGGTGCCTCGATCGAGTGGTGGTGGAGCG
CGCGGTCGGCCAAGAAGGGAAACAAGCTGCTCGACCAAGAGTCCGCGGTG
AGAGAGTGTTTGGGTGCTAGACCTTTGTCAGAGGCCGAAAGAGAACGAAG
GTTGACCCAAGACCTTGGTTGATTTAGAGAGTGATAGACGTTGCAACAGG
CATCACCATCACCAGGTACTATAAAGCATTTCCATCAATACGTAGATATC
ATCCGCGTATCCCACGGAGGTCCCGTAGACAGTATACTCTGCCGAGCACC
CCCAAACAGAGAGGGACCAGTGAAAACGAAGCCCTCACACCCGTGGGTGT
TCGCTCATCTTGCTCGAAATATTTGACGCACAGCAGTGTACACACGTGTG
TGTATATATATATATGCGTGCAAAAAAATGGGGGAAAACGAAAATCAAGC
CCCTAGACAAGACGGGTGGATAGTGGGCCAAGAATGGTAGATGCGGTTGC
TCGACCCGAAGAGTCATCGGTGAGGGAGAAAGCACACGGGAATGATCTTT
GCTGTTGGAAGTATGTTCGTAAGACCAGGTGTCAAATGGGCGATGAGAAC
GCAAGTACGCAGACGGTTGGATGTAGGTCGAGGACGAGTGGGGAGTAAGC
GACAAAAGACAAAATGAACGAAAGGCGTAGTCGTCGACTGTGCCTGTACG
CTGACCAATCACTGCTGTTGCTGTTGTTTGACATTGATTATGTTGCCGCG
TACCTGTACCCATCTGCCGATGGCTCGACGTACATCGATCGTTGATCTTC
GAACGAAATGAATCAGGCCTTCATGGCGGAGTGGAACAAAGAACGAGACG
CTTTGATGGCTAGGCGGACGTACCCCATCAAGCTTTTGGCCCACGAAGTA
GAGGTGAGACTCACTCGCACAAAAATATCTTCAAACGTGTCAATGATGGT
GGATGTATGACTGGTCAGTTGTTGTTGTTGATGATGGTGTGTCAGGGAGA
AGACGTGTGTACAATAAACATGATGATTTGTCGCCAGGGAAGATTTATCC
GCCGTCGCCGAAGCGCCGGGGAGATGAGCATGCACCTGCGCAAACTGGAT
GTGTTGTTGTTGCTGCTGCTGTGGCTGAGGCTGCTGTATTTATTATTGGT
CTGCTGATAGCTGAAACGCCCTTGGGATCAATCAGCGTGCACCTGACGCT
AACTAGATATGTTGTTGTTGGTGGTGTTGGTGGTGTTGTGGCTGTGTTTT
TGAAAACGAACATGCCCCTGACTCAACCGAGCATGTTACTGTTGTTGTTG
CTGCTGCTGTGGCTTGTGCGTGTTTTGTTTTGGTCGGCCGGCCGGTCGGT
CGCAGGAGGCGGAAGTGCAGCTGATGCAACTGGTGGCGGCTGCCGAGGAC
GCGGGCGTGGACTTGGGGGCCGGGGGCGGCAGCGGGTTGGGAGGAGGAGC
GGCGCAGAGGCCGAAGGCGCGCAGCATCCAGCAGGACAACATGGAGTACG
AGGAGTTCAAGCAGCCGGACGCGGACGGCGACAACGTCATCAGCAAGACG
GAG back to topCoding sequence (CDS) from alignment at E-fasciculatus_F_contig1419:13141..18043+ >mRNA_E-fasciculatus_F_contig1419.3060.1 ID=mRNA_E-fasciculatus_F_contig1419.3060.1|Name=mRNA_E-fasciculatus_F_contig1419.3060.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1110bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1419:13141..18043+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female) ATGCTCGGACGGCGATTGTTTGTGGGCGTGCTGTCCCTGGCGACATCGGT CATGGTGGCGGGATACGACGACAGATGCTCGGACGGCGATTGTTTGTGGG CGTGCTGTCCCTGGCGACATCGGTCATGGTGGCGGGATACGACGACAGCA GACCAATGAATGAAGACGAATACTTCGGGGCCCGCATGCAAGAACATCAC CAGGGGGCGGGATTATACCAAGAACCACAAGGCAGACCAATGAATGAAGA CGAATACTTCGGGGCCCGCATGCAAGAACATCACCAGGGGGCGGGATTAT ACCAAGAACCACAAGGGAGTAGCAAGCTAGTCCTCCTTGCCGGAGCGATC GCGGGTGCCTCGATCGAGTGGTGGTGGAGCGCGCGGTCGGCCAAGAAGGG AAACAAGCTGCTCGACCAAGAGTCCGCGGAGTAGCAAGCTAGTCCTCCTT GCCGGAGCGATCGCGGGTGCCTCGATCGAGTGGTGGTGGAGCGCGCGGTC GGCCAAGAAGGGAAACAAGCTGCTCGACCAAGAGTCCGCGGCCTTCATGG CGGAGTGGAACAAAGAACGAGACGCTTTGATGGCTAGGCGGACGTACCCC ATCAAGCTTTTGGCCCACGAAGTAGAGGCCTTCATGGCGGAGTGGAACAA AGAACGAGACGCTTTGATGGCTAGGCGGACGTACCCCATCAAGCTTTTGG CCCACGAAGTAGAGGAGGCGGAAGTGCAGCTGATGCAACTGGTGGCGGCT GCCGAGGACGCGGGCGTGGACTTGGGGGCCGGGGGCGGCAGCGGGTTGGG AGGAGGAGCGGCGCAGAGGCCGAAGGCGCGCAGCATCCAGCAGGACAACA TGGAGTACGAGGAGTTCAAGCAGCCGGACGCGGACGGCGACAACGTCATC AGCAAGACGGAGGAGGCGGAAGTGCAGCTGATGCAACTGGTGGCGGCTGC CGAGGACGCGGGCGTGGACTTGGGGGCCGGGGGCGGCAGCGGGTTGGGAG GAGGAGCGGCGCAGAGGCCGAAGGCGCGCAGCATCCAGCAGGACAACATG GAGTACGAGGAGTTCAAGCAGCCGGACGCGGACGGCGACAACGTCATCAG CAAGACGGAG back to top
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