mRNA_E-fasciculatus_F_contig14188.3057.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig14188.3057.1
Unique NamemRNA_E-fasciculatus_F_contig14188.3057.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig14188.3057.1 vs. uniprot
Match: D7FTV5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTV5_ECTSI)

HSP 1 Score: 355 bits (912), Expect = 1.140e-115
Identity = 225/391 (57.54%), Postives = 253/391 (64.71%), Query Frame = 1
Query:    1 SSCDGIEESVCCAADGCEDNAALGDLLACINADSTCSIDIGDCAADGSRAISDXXXXXXXXXXXXXXXXXXXXXXXXX--TDCPTELAACNADDECILCTQSYVEAVEGCFESAS-SSCDGIEEAVCCAVDGCEDNAALSDLLDCINVDSTCSIDIGDCAADGSRAISGSDTTXXXXXXXXXGPVIFPSTPTTTXXXXXXXXXXXXXXXXXXXXXXXXDCATELSACTADSECEVCVQSFAAASDECLAGAAGSSCDDIDEYLCCAVEGCEDNDMLGDLLGAFLVVVCLQMGHGRCCSCVVVSATLAPIPCAVHVFSAKPHTIFPRKTPCPIDIGVCDGALAVSDDGDDSAGDTDATNTENSATPSAAAMGSSTAVWLIAAAAPTLWGRFQ 1164
            S+CD +EESVCCA DGCEDN AL DLL CINA+STCSIDIGDCA DGSR ISD                           TDCPTE++ACNADDEC+ CTQSYVEAV+GCF + + S+CD +EEAVCCAVDGCEDN ALSDLL CIN DSTC +DI DCAADGSR ISGSDTT          P IFPSTPTTT  XXXXXXXX     XXXXXXXXX C TEL+AC+ADSEC  C +S+ AA + CLA   GS+CD I+E +CCAV+GCEDND L DLLG      CL                                        CPIDIG CD ++A+SD+     G+ DA NTE+SATPSA AMG STAVWLIAA AP LW +FQ
Sbjct:  183 STCDDVEESVCCAVDGCEDNEALNDLLVCINAESTCSIDIGDCAEDGSRGISDSDTTTDTDDAVIDTTTDSPYTSMTTSETDCPTEISACNADDECVTCTQSYVEAVDGCFAAVTGSTCDDVEEAVCCAVDGCEDNEALSDLLTCINEDSTCQVDIEDCAADGSRDISGSDTTTDTD------PAIFPSTPTTTTSXXXXXXXXPGGTEXXXXXXXXXXCPTELAACSADSECIACTESYVAAVEGCLAAVTGSTCDGIEEAVCCAVDGCEDNDALNDLLG------CLNADT------------------------------------CPIDIGDCDSSVAISDE----EGEADAGNTESSATPSAVAMGGSTAVWLIAAVAPILWRQFQ 521          
BLAST of mRNA_E-fasciculatus_F_contig14188.3057.1 vs. uniprot
Match: D7FTV3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTV3_ECTSI)

HSP 1 Score: 274 bits (701), Expect = 1.840e-83
Identity = 190/411 (46.23%), Postives = 227/411 (55.23%), Query Frame = 1
Query:    1 SSCDGIEESVCCAADGCEDNAALGDLLACINADSTCSIDIGDCAADGSRAISDXXXXXXXXXXXXXXXXXXXXXXXXX--------TDCPTELAACNADDECILCTQSYVEAVEGCFESAS-SSCDGIEEAVCCAVDGCEDNAALSDLLDCINVDSTCSIDIGDCAADGSRAISGSDTTXXXXXXXXXGPVIFPSTPTTTXXXXXXXXXXXXXXXXXXXXXXXXDCATELSACTADSECEVCVQSFAAASDECLAGAAGSSCDDIDEYLCCAVEGCEDNDMLGDLLG--------AFLVVVCLQMGHGRCCSCVVVSATLAPIPCAVHVFSAKPHTIFPRKTPCPIDIGVCDGALAVSDDGDDSAGDTDA------TNTENSATPSAAAMGSSTAVWLIAAAAPTLWGRFQ 1164
            S+CD +EE+VCCA DGCEDN AL DLLACIN+DS CS+DIGDCA+DGSRAISD                 XXXX            T+C TE+ ACN D EC+ C  SY   VEGC  SA  ++CD +E AVCCAVDGCEDN  L+DLL CIN D+ CS D+GDCA+DGSRAIS SD T             + +T TTT          XXXXX         +CATE+ AC  D+EC  CV S+AA  + CL  A G++CDD++  +CCAV+GCEDND L DLL         +F +  C   G G        + T +P                   T            L + DD +D     DA      TNTE+SAT SAAA GSS  VWLIAAAAP+LW RFQ
Sbjct:  182 STCDDLEEAVCCAVDGCEDNVALNDLLACINSDSPCSVDIGDCASDGSRAISDSDTTTDTDSAGYLTTSTXXXXTDTIYTSMTXXETECATEVVACNDDTECVDCFTSYAALVEGCLVSAGGTTCDDLEGAVCCAVDGCEDNDGLNDLLACINADTGCSFDLGDCASDGSRAISDSDATTDTDSAG------YLTTSTTTSTTDTIYTSMXXXXX---------ECATEVVACNDDTECVDCVTSYAALVEGCLVSAGGTTCDDLEGAVCCAVDGCEDNDGLNDLLACINADTGCSFDLGDCASGGSGAISGSDTTTDTGSPXXXXXXXXXXXXXXXXXXXTAADDGESTGSAPLPIGDDDEDKK---DAXXXXXPTNTESSATRSAAAKGSSAVVWLIAAAAPSLWRRFQ 574          
BLAST of mRNA_E-fasciculatus_F_contig14188.3057.1 vs. uniprot
Match: D7FK67_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK67_ECTSI)

HSP 1 Score: 257 bits (657), Expect = 1.630e-78
Identity = 179/409 (43.77%), Postives = 214/409 (52.32%), Query Frame = 1
Query:    7 CDGIEESVCCAADGCEDNAALGDLLACINADSTCSIDIGDCAADGSRAISDXXXXXXXXXXXXXXXXXXXXXXXXX--------TDCPTELAACNADDECILCTQSYVEAVEGCFESAS-SSCDGIEEAVCCAVDGCEDNAALSDLLDCINVDSTCSIDIGDCAADGSRAISGSDTTXXXXXXXXXGPVIFPSTPTTTXXXXXXXXXXXXXXXXXXXXXXXXDCATELSACTADSECEVCVQSFAAASDECLAGAAGSSCDDIDEYLCCAVEGCEDNDMLGDLLG--------AFLVVVCLQMGHGRCCSCVVVSATLAPIPCAVHVFSAKPHTIFPRKTPCPIDIGVCDGALAVSDDGDDSAGDTDA------TNTENSATPSAAAMGSSTAVWLIAAAAPTLWGRFQ 1164
            CD +E +VCCA DGCEDN  L DLLACINAD+ CS D+GDCA+DGSRAISD                                  +C TE+ ACN D EC+ C  SY   VEGC  SA  ++CD +E AVCCAVDGCEDN  L+DLL CIN D+ CS D GDCA+ GSRAIS SD T             + +T TT XXXX      XX            +CATE+ AC  D+EC  C  S+AA  + CL  A G++CDD++  +CCAV+GCEDND L DLL         +F +  C   G G        + T +P                   T            L + DD +D     DA      TNTE+SAT SAAA GSS  VWLIAAAAP+LW RFQ
Sbjct:   44 CDDLEGAVCCAVDGCEDNDGLNDLLACINADTGCSFDLGDCASDGSRAISDSDATTDTDSAGYLTTSTTTSTTDTIYTSMXXXXXECATEVVACNDDTECVDCVTSYAALVEGCLVSAGGTTCDDLEGAVCCAVDGCEDNDGLNDLLACINADTGCSFDFGDCASGGSRAISDSDATTDTDSAG------YLTTSTTXXXXXTIYTSMXXSET---------ECATEVEACNDDTECVDCFTSYAALVEGCLVSAGGTTCDDLEGAVCCAVDGCEDNDGLSDLLACINADTGCSFDLGDCASGGSGAISGSDTTTDTGSPXXXXXXXXXXXXXXXXXXXTAADDGESTGSAPLPIGDDDEDKK---DAXXXXXPTNTESSATRSAAAKGSSAVVWLIAAAAPSLWRRFQ 434          
BLAST of mRNA_E-fasciculatus_F_contig14188.3057.1 vs. uniprot
Match: A0A6H5JWN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWN7_9PHAE)

HSP 1 Score: 240 bits (612), Expect = 3.990e-69
Identity = 155/374 (41.44%), Postives = 193/374 (51.60%), Query Frame = 1
Query:    1 SSCDGIEESVCCAADGCEDNAALGDLLACINADSTCSIDIGDCAADGSRAI--------SDXXXXXXXXXXXXXXXXXXXXXXXXXTDCPTELAACNADDECILCTQSYVEAVEGCFESAS-SSCDGIEEAVCCAVDGCEDNAALSDLLD-------------CINVDSTCSIDIGDCAADGSRAISGSDTTXXXXXXXXXGPVIFPSTPTTTXXXXXXXXXXXXXXXXXXXXXXXXDCATELSACTADSECEVCVQSFAAASDECLAGAAGSSCDDIDEYLCCAVEGCEDNDMLGDLLGAFLVVVCLQMGHGRCCSCVVVSATLAPIPCAVHVFSAKPHTIFPRKTPCPIDIGVCDGALAVSDDGDDSAGDTD 1056
            S+CD +EE+VCCA DGCEDN AL DLLAC+N+DS CSIDIGDCA+DGSR          +D                         T+C  E+ ACN D EC+ C  SY   VEGC ESA  ++CD +E AVCCAVDGCEDN AL+DLL              C   D+ CSIDIGDCA+DGSR   GSDTT             + +TPT T                        +CA E+ AC  D+EC  C  S+AA  + C+  A G++CDD++  +CCAV+GCEDND L DLLGAFLVV+CL+                  + C++              T C IDIG C    +  + G D+  DTD
Sbjct:  182 STCDDLEEAVCCAVDGCEDNVALNDLLACLNSDSPCSIDIGDCASDGSRGNYGSDTTTDTDSAGYLTTPTITPTTDSMYPSMTTSETECAIEVEACNDDTECVDCATSYAALVEGCIESAGGTTCDDLEGAVCCAVDGCEDNDALNDLLGAFLVVLCLRKSLACSIADTGCSIDIGDCASDGSRGNYGSDTTTDTDSAG------YLTTPTITPTTDSMYPSMTTSET---------ECAIEVEACNDDTECVDCATSYAALVEGCIESAGGTTCDDLEGAVCCAVDGCEDNDALNDLLGAFLVVLCLRKS----------------LACSI------------ADTGCSIDIGDCASDGSRGNYGSDTTTDTD 512          
BLAST of mRNA_E-fasciculatus_F_contig14188.3057.1 vs. uniprot
Match: D7FTV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTV4_ECTSI)

HSP 1 Score: 202 bits (514), Expect = 3.840e-58
Identity = 114/172 (66.28%), Postives = 131/172 (76.16%), Query Frame = 1
Query:    1 SSCDGIEESVCCAADGCEDNAALGDLLACINADSTCS-IDIGDCAADGSRAISDXXXXXXXXXXXXXXXXXXXXXXXXXTDCPTELAACNADDECILCTQSYVEAVEGCFESAS-SSCDGIEEAVCCAVDGCEDNAALSDLLDCINVDSTCSIDIGDCAADGSRAISGSDTT 510
            S+CD + E++CCAA+GCEDN    D++ CIN D  C  IDIGDCA  GS AIS                  XXXXXXXXTDCPTE++ACNADDEC+ CTQSYV+AVEGCF SA+ S+CD +EE+VCCAVDGCEDN AL+DLL CIN +STCSIDIGDC ADGSRAISGSDTT
Sbjct:   94 STCDDLAEAMCCAAEGCEDNEEFADIMGCINGDLGCGVIDIGDCAGGGSTAIS-------------GSDTTXXXXXXXXTDCPTEISACNADDECVTCTQSYVDAVEGCFASATGSTCDDVEESVCCAVDGCEDNEALNDLLACINAESTCSIDIGDCEADGSRAISGSDTT 252          
BLAST of mRNA_E-fasciculatus_F_contig14188.3057.1 vs. uniprot
Match: A0A6H5K6K1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6K1_9PHAE)

HSP 1 Score: 196 bits (499), Expect = 1.250e-54
Identity = 115/170 (67.65%), Postives = 130/170 (76.47%), Query Frame = 1
Query:    7 CDGIEESVCCAADGCEDNAALGDLLACINADSTCS-IDIGDCAADGSRAISDXXXXXXXXXXXXXXXXXXXXXXXXXTDCPTELAACNADDECILCTQSYVEAVEGCFESAS-SSCDGIEEAVCCAVDGCEDNAALSDLLDCINVDSTCSIDIGDCAADGSRAISGSDTT 510
            CD + E++CCAA+GCEDN    D++ CIN D  C  IDIGDCA  GS AIS               XXXXXXXXXXX  CPTE++ACNAD EC+ CTQSYV+AVEGCFESA+ S+CD +EEAVCCAVDGCEDN AL+DLL CIN +STCSIDIGDCAADGSRAISGS TT
Sbjct:   87 CDDLAEAMCCAAEGCEDNEEFADIMGCINGDLGCGVIDIGDCAGGGSTAIS-------------GSXXXXXXXXXXXXXCPTEISACNADSECVTCTQSYVDAVEGCFESATGSTCDDVEEAVCCAVDGCEDNEALNDLLACINAESTCSIDIGDCAADGSRAISGSGTT 243          
BLAST of mRNA_E-fasciculatus_F_contig14188.3057.1 vs. uniprot
Match: A0A6H5JW24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW24_9PHAE)

HSP 1 Score: 129 bits (325), Expect = 5.840e-29
Identity = 85/156 (54.49%), Postives = 96/156 (61.54%), Query Frame = 1
Query:   94 ADSTCSIDIGDCAADGSRAIS----------------DXXXXXXXXXXXXXXXXXXXXXXXXXTDCPTELAACNADDECILCTQSYVEAVEGCFESASSS-CDGIEEAVCCAVDGCEDNAALSDLLDCINVDSTCSIDIGDCAADGSRAISGSDTT 510
            AD+ CS+DIGDCA  GS AIS                  XXXXXXX                 ++C  EL AC AD ECI+CTQSYV+ ++GCF SA+ S CD +E AVCCAVDGCED  AL+D L CIN DSTC IDIGDCA DGS AI  SDTT
Sbjct: 1141 ADTGCSVDIGDCATAGSVAISGSDTTTDTDSTGYLTSSAXXXXXXXGFPIDTTTNSTYTSMTTSECAIELEACKADGECIVCTQSYVDTMDGCFASATGSICDDLEGAVCCAVDGCEDIDALNDHLACINADSTCFIDIGDCAMDGSAAIFISDTT 1296          
BLAST of mRNA_E-fasciculatus_F_contig14188.3057.1 vs. uniprot
Match: D7FTV6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTV6_ECTSI)

HSP 1 Score: 124 bits (310), Expect = 3.610e-27
Identity = 118/318 (37.11%), Postives = 153/318 (48.11%), Query Frame = 1
Query:    7 CDGIEESVCCAADGCEDNAALGDLLAC-INADSTCSIDIGDCAADGSRAISDXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------TDCPTELAACNADDECILCTQSYVEAVEGCFES-----ASSSCDGIEEAVCCAVDGCEDNAALSDLLDC-INVDSTCSIDIGDCAADGSRAISGSDTTXXXXXXXXX-----GPVIFPSTPTTTXXXXXXXXXXXXXXXXXXXXXXXXDCATELSACTADSECEVCVQSFAAASDECLAGAAGS---SCDDIDEYLCCAVEG---CEDNDMLGDL 828
            CD +E+  CCA DGC+ N  +     C   ADS C++++G CA DG+RAIS       XXXXXXXXXXXXXXXXXXX                          T CP E  AC  D  C  C QS+ ++   C  S     +S+ CD +E+  CCAVDGC+ N  +    DC    DS C++++G CA DGSRAISGSDT+                V+FP+T TT+                         C  E  ACTAD  C  C  +  ++ + C      S   +CD+  E  CCA+EG   CE+N +LG L
Sbjct:  256 CDVLEDIACCAVDGCQGNELMVAYFDCAFAADSECAVEVGACAEDGNRAISGSDTSTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPGFFSDSGTTTSTTSTWCPNEYLACVEDSACADCYQSFWDSWLTCDTSVISVASSNGCDVLEDIACCAVDGCQGNELMVAYFDCAFAADSECAVEVGACAEDGSRAISGSDTSTDSISTTDTXXXGNSSVVFPTTTTTSAFSSDSVSMTNDTAI----------CVAENDACTADPTCLACAGAILSSQEVCQGSDFDSETATCDEKQEANCCALEGGTDCENNVLLGAL 563          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14188.3057.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FTV5_ECTSI1.140e-11557.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTV3_ECTSI1.840e-8346.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FK67_ECTSI1.630e-7843.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JWN7_9PHAE3.990e-6941.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTV4_ECTSI3.840e-5866.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K6K1_9PHAE1.250e-5467.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JW24_9PHAE5.840e-2954.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTV6_ECTSI3.610e-2737.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14188contigE-fasciculatus_F_contig14188:3..1957 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons5
Model size1167
Cds size1167
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14188.3057.1prot_E-fasciculatus_F_contig14188.3057.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig14188 3..1957 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927908.9899085-CDS-E-fasciculatus_F_contig14188:2..841622927908.9899085-CDS-E-fasciculatus_F_contig14188:2..84Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14188 3..84 +
1695995747.464752-CDS-E-fasciculatus_F_contig14188:2..841695995747.464752-CDS-E-fasciculatus_F_contig14188:2..84Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14188 3..84 +
1622927909.0025594-CDS-E-fasciculatus_F_contig14188:368..7071622927909.0025594-CDS-E-fasciculatus_F_contig14188:368..707Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14188 369..707 +
1695995747.4792469-CDS-E-fasciculatus_F_contig14188:368..7071695995747.4792469-CDS-E-fasciculatus_F_contig14188:368..707Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14188 369..707 +
1622927909.0167096-CDS-E-fasciculatus_F_contig14188:1034..14801622927909.0167096-CDS-E-fasciculatus_F_contig14188:1034..1480Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14188 1035..1480 +
1695995747.4878454-CDS-E-fasciculatus_F_contig14188:1034..14801695995747.4878454-CDS-E-fasciculatus_F_contig14188:1034..1480Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14188 1035..1480 +
1622927909.2295659-CDS-E-fasciculatus_F_contig14188:1608..17171622927909.2295659-CDS-E-fasciculatus_F_contig14188:1608..1717Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14188 1609..1717 +
1695995747.4965293-CDS-E-fasciculatus_F_contig14188:1608..17171695995747.4965293-CDS-E-fasciculatus_F_contig14188:1608..1717Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14188 1609..1717 +
1622927909.2477725-CDS-E-fasciculatus_F_contig14188:1766..19571622927909.2477725-CDS-E-fasciculatus_F_contig14188:1766..1957Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14188 1767..1957 +
1695995747.504937-CDS-E-fasciculatus_F_contig14188:1766..19571695995747.504937-CDS-E-fasciculatus_F_contig14188:1766..1957Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14188 1767..1957 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig14188.3057.1

>prot_E-fasciculatus_F_contig14188.3057.1 ID=prot_E-fasciculatus_F_contig14188.3057.1|Name=mRNA_E-fasciculatus_F_contig14188.3057.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=389bp
SSCDGIEESVCCAADGCEDNAALGDLLACINADSTCSIDIGDCAADGSRA
ISDTTTDTDDSVIDTTTDSFYTTTDTTETDCPTELAACNADDECILCTQS
YVEAVEGCFESASSSCDGIEEAVCCAVDGCEDNAALSDLLDCINVDSTCS
IDIGDCAADGSRAISGSDTTTDTDSTTDTGPVIFPSTPTTTTSTTGTDST
TDSTTDSTSMTTSETDCATELSACTADSECEVCVQSFAAASDECLAGAAG
SSCDDIDEYLCCAVEGCEDNDMLGDLLGAFLVVVCLQMGHGRCCSCVVVS
ATLAPIPCAVHVFSAKPHTIFPRKTPCPIDIGVCDGALAVSDDGDDSAGD
TDATNTENSATPSAAAMGSSTAVWLIAAAAPTLWGRFQ*
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mRNA from alignment at E-fasciculatus_F_contig14188:3..1957+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig14188.3057.1 ID=mRNA_E-fasciculatus_F_contig14188.3057.1|Name=mRNA_E-fasciculatus_F_contig14188.3057.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1955bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14188:3..1957+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
TCCAGCTGCGACGGAATTGAAGAATCTGTATGCTGTGCGGCGGATGGCTG CGAGGATAACGCGGCGCTCGGTGACCTCTTAGGTGCGTTCCTGGTTGGTT GCCTTGTGCCCTGCAGATGTCTGGGAGTGTAGTGTACCGAGATTCACGTC GTATACCAGGGACTTGAAAGGATCGAAACGTCGACGTCAGCACTTGATTG TGACGTTTGTTGCGCGACCGGCGGGCGACCTATATCTGTCAGAAATGGGA ACCAGTAGTGTCCCCGGAGCATGGCCCGCACTGTCTACACCAAGACGTTT GACTGTTTGTATCAAGAATACCGTTTTTGCCCCCTCGCTTCACCCGCTTT ACTTTCCACCGGCCAGCCTGCATCAATGCGGATTCTACATGCTCCATCGA CATCGGAGATTGCGCAGCGGACGGAAGCCGGGCCATCTCCGATACCACCA CCGACACCGATGATAGCGTTATCGATACTACCACCGACTCTTTCTACACC ACGACGGACACAACCGAGACCGACTGCCCTACCGAGCTCGCGGCTTGTAA CGCGGACGACGAGTGCATATTATGCACCCAGTCGTACGTTGAAGCCGTGG AGGGATGCTTTGAATCAGCGAGTTCCAGCTGCGACGGAATTGAAGAAGCT GTGTGCTGTGCGGTGGATGGCTGCGAGGACAACGCGGCGCTCAGTGACCT CTTAGGTGCGTTCCTGGTTGGTTGCCTTGTTCCCTGCAGATGTCTGGGAG TGTAGTGTACCGAGATTCACGTCGTATACGAGGGACTTGATAGGATCGAA ACGTCGACGTCAGCACTTGATTGTGACGTTTGTTGCGCGACCGGCGGGCG ACCTATATTGGTCATAGAGGGATACCAGTATTGTCCCCGGAGCACGGCCG GCACTGCTCATGTGCCGTAGTTTCTACAACTGTAGGACGAACACCGGGGT GTTGTGACTGTTCTTCCGACGAACCTAATTTTGTTCCCCCCCCGAAACAC TTGATTCTCGCGCTACATGTCCGCCCGGTCAGATTGCATCAATGTGGATT CTACATGCTCCATCGACATCGGAGATTGCGCGGCGGACGGAAGCCGGGCC ATTTCCGGCTCCGACACCACAACCGACACTGATTCCACCACCGACACCGG TCCCGTCATCTTCCCGTCGACACCGACAACCACAACTTCCACAACCGGTA CCGATTCCACCACCGATTCCACGACCGATTCCACCTCGATGACGACGAGC GAGACCGATTGCGCCACCGAGTTGTCGGCTTGCACCGCGGATTCGGAGTG CGAAGTATGCGTGCAGTCGTTTGCTGCAGCCTCGGACGAATGCTTGGCCG GAGCGGCTGGTTCCAGCTGCGACGATATTGATGAGTACTTGTGCTGTGCG GTGGAAGGCTGCGAGGACAACGATATGCTCGGTGATCTCTTAGGTGCGTT CCTGGTTGTCGTGTGTCTGCAGATGGGTGTGTTGAGGTTGACCGCGTGAG GGGCTTGACAGGATGGAAACCTCTGCACGTTTTTGTGGCATCGTACTGCG ACCGGCGGGCGATTTGCATGTGTCAGAAATGGATTCCAGTCGTAGCCCCC CCGTAGCACGGCCGGTGCTGTTCATGTGTCGTTGTGTCTGCCACCTTGGC ACCAATACCGTGTGCTGTGCATGTTTTTTCGGCAAAACCTCACACTATAT TCCCTCGCAAAACACGTGGTTCTCGCGCTGCTTATCCACCGGTCAGGTTG CCTCTTTTCCACAGCATGCCCCATCGACATTGGGGTTTGCGACGGCGCCC TAGCAGTTTCTGACGATGGGGACGACTCTGCCGGAGACACGGACGCGACC AACACCGAGAATTCCGCCACCCCTTCGGCTGCGGCAATGGGAAGTTCCAC GGCCGTTTGGCTGATCGCCGCCGCTGCACCCACCCTGTGGGGCCGGTTCC AGTAA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14188:3..1957+

>mRNA_E-fasciculatus_F_contig14188.3057.1 ID=mRNA_E-fasciculatus_F_contig14188.3057.1|Name=mRNA_E-fasciculatus_F_contig14188.3057.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2334bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14188:3..1957+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
TCCAGCTGCGACGGAATTGAAGAATCTGTATGCTGTGCGGCGGATGGCTG
CGAGGATAACGCGGCGCTCGGTGACCTCTTAGTCCAGCTGCGACGGAATT
GAAGAATCTGTATGCTGTGCGGCGGATGGCTGCGAGGATAACGCGGCGCT
CGGTGACCTCTTAGCCTGCATCAATGCGGATTCTACATGCTCCATCGACA
TCGGAGATTGCGCAGCGGACGGAAGCCGGGCCATCTCCGATACCACCACC
GACACCGATGATAGCGTTATCGATACTACCACCGACTCTTTCTACACCAC
GACGGACACAACCGAGACCGACTGCCCTACCGAGCTCGCGGCTTGTAACG
CGGACGACGAGTGCATATTATGCACCCAGTCGTACGTTGAAGCCGTGGAG
GGATGCTTTGAATCAGCGAGTTCCAGCTGCGACGGAATTGAAGAAGCTGT
GTGCTGTGCGGTGGATGGCTGCGAGGACAACGCGGCGCTCAGTGACCTCT
TAGCCTGCATCAATGCGGATTCTACATGCTCCATCGACATCGGAGATTGC
GCAGCGGACGGAAGCCGGGCCATCTCCGATACCACCACCGACACCGATGA
TAGCGTTATCGATACTACCACCGACTCTTTCTACACCACGACGGACACAA
CCGAGACCGACTGCCCTACCGAGCTCGCGGCTTGTAACGCGGACGACGAG
TGCATATTATGCACCCAGTCGTACGTTGAAGCCGTGGAGGGATGCTTTGA
ATCAGCGAGTTCCAGCTGCGACGGAATTGAAGAAGCTGTGTGCTGTGCGG
TGGATGGCTGCGAGGACAACGCGGCGCTCAGTGACCTCTTAGATTGCATC
AATGTGGATTCTACATGCTCCATCGACATCGGAGATTGCGCGGCGGACGG
AAGCCGGGCCATTTCCGGCTCCGACACCACAACCGACACTGATTCCACCA
CCGACACCGGTCCCGTCATCTTCCCGTCGACACCGACAACCACAACTTCC
ACAACCGGTACCGATTCCACCACCGATTCCACGACCGATTCCACCTCGAT
GACGACGAGCGAGACCGATTGCGCCACCGAGTTGTCGGCTTGCACCGCGG
ATTCGGAGTGCGAAGTATGCGTGCAGTCGTTTGCTGCAGCCTCGGACGAA
TGCTTGGCCGGAGCGGCTGGTTCCAGCTGCGACGATATTGATGAGTACTT
GTGCTGTGCGGTGGAAGGCTGCGAGGACAACGATATGCTCGGTGATCTCT
TAGGTGCGTTCCTGGTTGTCGTGTGTCTGCAGATGGGTATTGCATCAATG
TGGATTCTACATGCTCCATCGACATCGGAGATTGCGCGGCGGACGGAAGC
CGGGCCATTTCCGGCTCCGACACCACAACCGACACTGATTCCACCACCGA
CACCGGTCCCGTCATCTTCCCGTCGACACCGACAACCACAACTTCCACAA
CCGGTACCGATTCCACCACCGATTCCACGACCGATTCCACCTCGATGACG
ACGAGCGAGACCGATTGCGCCACCGAGTTGTCGGCTTGCACCGCGGATTC
GGAGTGCGAAGTATGCGTGCAGTCGTTTGCTGCAGCCTCGGACGAATGCT
TGGCCGGAGCGGCTGGTTCCAGCTGCGACGATATTGATGAGTACTTGTGC
TGTGCGGTGGAAGGCTGCGAGGACAACGATATGCTCGGTGATCTCTTAGG
TGCGTTCCTGGTTGTCGTGTGTCTGCAGATGGGTCACGGCCGGTGCTGTT
CATGTGTCGTTGTGTCTGCCACCTTGGCACCAATACCGTGTGCTGTGCAT
GTTTTTTCGGCAAAACCTCACACTATATTCCCTCGCAAAACACCACGGCC
GGTGCTGTTCATGTGTCGTTGTGTCTGCCACCTTGGCACCAATACCGTGT
GCTGTGCATGTTTTTTCGGCAAAACCTCACACTATATTCCCTCGCAAAAC
ACCATGCCCCATCGACATTGGGGTTTGCGACGGCGCCCTAGCAGTTTCTG
ACGATGGGGACGACTCTGCCGGAGACACGGACGCGACCAACACCGAGAAT
TCCGCCACCCCTTCGGCTGCGGCAATGGGAAGTTCCACGGCCGTTTGGCT
GATCGCCGCCGCTGCACCCACCCTGTGGGGCCGGTTCCAGTAACATGCCC
CATCGACATTGGGGTTTGCGACGGCGCCCTAGCAGTTTCTGACGATGGGG
ACGACTCTGCCGGAGACACGGACGCGACCAACACCGAGAATTCCGCCACC
CCTTCGGCTGCGGCAATGGGAAGTTCCACGGCCGTTTGGCTGATCGCCGC
CGCTGCACCCACCCTGTGGGGCCGGTTCCAGTAA
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