mRNA_E-fasciculatus_F_contig14185.3056.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14185.3056.1 vs. uniprot
Match: D8LNX2_ECTSI (Protein phosphatase 2C containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNX2_ECTSI) HSP 1 Score: 380 bits (975), Expect = 6.520e-132 Identity = 187/191 (97.91%), Postives = 189/191 (98.95%), Query Frame = 1
Query: 1 MKEDLGGSGVRLFVVLDGHGELGHLVSRRCSAKLPNLVIDSNLCVARATLRMADDLRSCPVDCASSGATCVLTTIHDGKISVANLGDSKCVLARLVNGQVCAVPLSHDHKPDRPDERQRILAIGGQVGSRHLVVGSNPSGPIRIPMGPARVWYRCRGEIMGLAMSRSLGDDIAHQAGVSSEPEVQEHQIDA 573
MKEDLGG GVRLFVVLDGHGELGHLVSRRCSAKLPNLV+DSNLCVARATLRMADDLRSCPVDCASSGATCVLTTI DGKISVANLGDSKCVLARLVNGQVCAVPLSHDHKPDRPDERQRILAIGGQVGSRHLVVGSNPSGPIRIPMGPARVWYRCRGEIMGLAMSRSLGDDIAHQAGVSSEPEV+EHQIDA
Sbjct: 18 MKEDLGGLGVRLFVVLDGHGELGHLVSRRCSAKLPNLVVDSNLCVARATLRMADDLRSCPVDCASSGATCVLTTIRDGKISVANLGDSKCVLARLVNGQVCAVPLSHDHKPDRPDERQRILAIGGQVGSRHLVVGSNPSGPIRIPMGPARVWYRCRGEIMGLAMSRSLGDDIAHQAGVSSEPEVKEHQIDA 208
BLAST of mRNA_E-fasciculatus_F_contig14185.3056.1 vs. uniprot
Match: A0A835YTT3_9STRA (Phosphatase 2C-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTT3_9STRA) HSP 1 Score: 228 bits (580), Expect = 6.230e-71 Identity = 124/208 (59.62%), Postives = 145/208 (69.71%), Query Frame = 1
Query: 10 DLGGSGVRLFVVLDGHGELGHLVSRRCSAKLPNLVIDSNLCVARATLRMADDLRS-CPVDCASSGATCVLTTIHD-GKISVANLGDSKCVLARLVNG-------------------QVCAVPLSHDHKPDRPDERQRILAIGGQVGSRHLVVGSNPSGPIRIPMGPARVWYRCRGEIMGLAMSRSLGDDIAHQAGVSSEPEVQEHQID 570
D GG +R+F VLDGHGE GHLV+RRC +LP L+ + ARA + + +DL S VDC SGATCV+ TI G ++VANLGDS+CVL R G QVCAVPL+ DHKPDRPDER RI A GGQVGSR L+VGS P+GPIRIPMGPARVWY+ RGE MGLAMSRS+GD IAH AGVS++PEV EH +D
Sbjct: 74 DGGGDRLRVFAVLDGHGEAGHLVTRRCRERLPQLLRAARGDAARACVALHEDLASGVHVDCQCSGATCVVVTISARGAVTVANLGDSRCVLGRWECGGXXXXXXXXXXXMVGRAQRQVCAVPLTTDHKPDRPDERARIQAAGGQVGSRQLIVGSGPAGPIRIPMGPARVWYQVRGETMGLAMSRSIGDVIAHAAGVSAQPEVVEHCLD 281
BLAST of mRNA_E-fasciculatus_F_contig14185.3056.1 vs. uniprot
Match: A0A7S2XVV9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVV9_9STRA) HSP 1 Score: 214 bits (544), Expect = 2.750e-66 Identity = 110/191 (57.59%), Postives = 136/191 (71.20%), Query Frame = 1
Query: 1 MKEDLGGSGVR-LFVVLDGHGELGHLVSRRCSAKLPNLVIDSNLCVARATLRMADDLRSCP-VDCASSGATCVLTTIHDGKISVANLGDSKCVLARLVNGQVCAVPLSHDHKPDRPDERQRILAIGGQVGSRHLVVGSNPSGPIRIPMGPARVWYRCRGEIMGLAMSRSLGDDIAHQAGVSSEPEVQEHQI 567
++E GGSG + VLDGHG+ GHLVS L + V+RA LRM +DL + P +D SGATCV+ + + V NLGDS+CVLAR VNG + V LS+DHKPDRPDERQRILA GG+VG R LVVG+ PSGP+R+PMGP R+WY+ RGE MGLAMSRSLGD I H GVS++PE++EHQ+
Sbjct: 103 LEERCGGSGDEGFYCVLDGHGQQGHLVSGYIRENLVRHYSECGQDVSRACLRMQEDLDTTPTLDTKCSGATCVIAILRGRSLLVGNLGDSRCVLARRVNGVLSPVALSNDHKPDRPDERQRILAAGGKVGCRQLVVGNGPSGPVRLPMGPMRIWYQVRGETMGLAMSRSLGDSIVHTQGVSADPELKEHQV 293
BLAST of mRNA_E-fasciculatus_F_contig14185.3056.1 vs. uniprot
Match: A0A7S4D964_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D964_HETAK) HSP 1 Score: 208 bits (530), Expect = 5.920e-64 Identity = 102/187 (54.55%), Postives = 133/187 (71.12%), Query Frame = 1
Query: 13 LGGSGVRLFVVLDGHGELGHLVSRRCSAKLPNLVIDSNLCVARATLRMADDL-RSCPVDCASSGATCVLTTIHDGKISVANLGDSKCVLARLVNGQVCAVPLSHDHKPDRPDERQRILAIGGQVGSRHLVVGSNPSGPIRIPMGPARVWYRCRGEIMGLAMSRSLGDDIAHQAGVSSEPEVQEHQID 570
+G + +F VLDGHG+ GHLVS +C +LP L ++ ++R L M +L +S +D SGATCV+ + +++V NLGDSK VL R VNG PL++DHKPDRPDERQRIL GG+VG R LVVG+ P+GP+R+PMGP R+WY+ RGE MGLAMSRSLGD I H GVS++PE+ EH +D
Sbjct: 52 VGNTDEAMFCVLDGHGQQGHLVSTQCRERLPQLYRETGNDLSRTCLAMQAELEKSTAMDVKCSGATCVICVVEGRRLTVGNLGDSKAVLGRRVNGVTLPHPLTNDHKPDRPDERQRILQAGGKVGCRQLVVGNGPNGPVRLPMGPMRIWYQVRGETMGLAMSRSLGDGIVHALGVSADPELTEHLLD 238
BLAST of mRNA_E-fasciculatus_F_contig14185.3056.1 vs. uniprot
Match: A0A7S2WTT9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTT9_9STRA) HSP 1 Score: 199 bits (505), Expect = 9.170e-59 Identity = 99/184 (53.80%), Postives = 124/184 (67.39%), Query Frame = 1
Query: 16 GGSGVRLFVVLDGHGELGHLVSRRCSAKLPNLVIDSNLCVARATLRMADDLRSCPVDCASSGATCVLTTIHDGKISVANLGDSKCVLARLVNGQVCAVPLSHDHKPDRPDERQRILAIGGQVGSRHLVVGSNPSGPIRIPMGPARVWYRCRGEIMGLAMSRSLGDDIAHQAGVSSEPEVQEHQI 567
G S + + V DGHGE GHLVSR +L + ++ + +RA +M +L VD SGATCV+ + I V N GDS+ VL R NG + A+ L+ DHKPDRPDER+R++ GGQVGSR LVVG N +GP+ +P+GP RVWY+ RGE MGLAMSRSLGD IAH GVSSEPEV EH +
Sbjct: 172 GESDLHAWGVFDGHGEFGHLVSRIIRERLGKIWLECSQNFSRAFWQMQSELDKSSVDARCSGATCVMVVLRGNTIQVGNCGDSRAVLGRRSNGTISALQLTSDHKPDRPDERRRVMQAGGQVGSRQLVVGHNANGPVTLPLGPPRVWYQIRGETMGLAMSRSLGDGIAHSNGVSSEPEVTEHAV 355
BLAST of mRNA_E-fasciculatus_F_contig14185.3056.1 vs. uniprot
Match: A0A7S3ZZR6_9STRA (Hypothetical protein n=4 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZZR6_9STRA) HSP 1 Score: 196 bits (497), Expect = 1.460e-57 Identity = 98/183 (53.55%), Postives = 124/183 (67.76%), Query Frame = 1
Query: 31 RLFVVLDGHGELGHLVSRRCSAKLPNLVIDSNLCVARATLRMADDLRSCPVDCASSGATCVLTTIHDGKISVANLGDSKCVLARLVNGQVCAVPLSHDHKPDRPDERQRILAIGGQVGSRHLVVGSNPSGPIRIPMGPARVWYR---CRGEIMGLAMSRSLGDDIAHQAGVSSEPEVQEHQID 570
R + VLDGHGE+GHLVS+RCS +L + S L ++ A M +DL C +D SGATCV +HD + VAN+GDS+ VL L +CA PL+ DHKPDR DE+ RI+A GGQV R LVVG + +GPI +P+GP RVWYR G+ MGLAMSRS GD IAH GVS EPE+ ++ +D
Sbjct: 158 RCYGVLDGHGEIGHLVSKRCSQQLCEHFVKSQLDMSLAFRLMQEDLSQCELDIKCSGATCVFVHLHDSYLRVANIGDSRGVLGHLDGANICATPLTSDHKPDRHDEQIRIVACGGQVSCRQLVVGHSSNGPITLPLGPPRVWYRRNSSHGDTMGLAMSRSFGDAIAHGLGVSCEPEITQYNLD 340
BLAST of mRNA_E-fasciculatus_F_contig14185.3056.1 vs. uniprot
Match: A0A482S1K4_9ARCH (Protein serine/threonine phosphatase 2C family protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S1K4_9ARCH) HSP 1 Score: 194 bits (493), Expect = 5.750e-57 Identity = 92/182 (50.55%), Postives = 127/182 (69.78%), Query Frame = 1
Query: 28 VRLFVVLDGHGELGHLVSRRCSAKLPNLVIDSNLCVARATLRMADDLRSCPVDCASSGATCVLTTIHDGKISVANLGDSKCVLARL-VNGQVCAVPLSHDHKPDRPDERQRILAIGGQVGSRHLVVGSNPSGPIRIPMGPARVWYRCRGEIMGLAMSRSLGDDIAHQAGVSSEPEVQEHQID 570
+R++ VLDGHGE GH+VS+RC P+ + +N V A M +DL S +D SGATCV+ + + +++V N GDS+ VL R +G + A PLS+DHKPD+P+ER+RIL GG +G R ++V GP+ +P+GP RVWY+ RGE +GLAMSRSLGD I H+ GV++EPE+ EHQID
Sbjct: 183 LRVYCVLDGHGEHGHIVSKRCRENFPHFLKSTNWQVEAAFNMMQNDLTSSEIDVRCSGATCVIACVSNNRLTVYNCGDSRAVLGRRSASGAIAAYPLSNDHKPDKPEERKRILGCGGHLGCRQVLVNQGNRGPVSMPVGPCRVWYQHRGETLGLAMSRSLGDSIVHKVGVTAEPELTEHQID 364
BLAST of mRNA_E-fasciculatus_F_contig14185.3056.1 vs. uniprot
Match: A0A7S1U9X7_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U9X7_9STRA) HSP 1 Score: 197 bits (500), Expect = 1.390e-56 Identity = 96/181 (53.04%), Postives = 124/181 (68.51%), Query Frame = 1
Query: 34 LFVVLDGHGELGHLVSRRCSAKLPNLVIDSNLCVARATLRMADDLRSCPVDCASSGATCVLTTIHDGK--------ISVANLGDSKCVLARLVNGQVCAVPLSHDHKPDRPDERQRILAIGGQVGSRHLVVGSNPSGPIRIPMGPARVWYRCRGEIMGLAMSRSLGDDIAHQAGVSSEPEV 552
LF V DGHGE GHLVSR+C ++P +I + L + A D +SC VDC+ SGAT V+ I + + + N GDS+ V+AR+VN + V L+ DHKPDRPDER+RI A+GG+VG+R +VVG P+G I +P+GPAR+WY CRGE MGLAMSRSLGD IAH+ G S EPE+
Sbjct: 316 LFAVFDGHGEFGHLVSRKCREEMPQRLISNRLDMGAAFDEAQDHFKSCEVDCSCSGATAVVIIIDNATRGRGGSSTLRIGNCGDSRAVVARVVNNTITGVTLTKDHKPDRPDERRRITAMGGKVGTRQVVVGHGPNGAITMPVGPARIWYNCRGETMGLAMSRSLGDLIAHRVGGSHEPEM 496
BLAST of mRNA_E-fasciculatus_F_contig14185.3056.1 vs. uniprot
Match: A0A7S2CMF9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CMF9_9STRA) HSP 1 Score: 167 bits (422), Expect = 3.310e-46 Identity = 89/192 (46.35%), Postives = 118/192 (61.46%), Query Frame = 1
Query: 1 MKEDLGGSGVRLFVVLDGHGELGHLVSRRCSAKLPNLVIDSNLCVARATLRMADDLRSCPVDCASSGATCVLTTIHDGKISVANLGDSKCVLARLVNG--QVCAVPLSHDHKPDRPDERQRILAIGGQVGSRHLVVGSNPSGPIRIPMGPARVWYRCRGEIMGLAMSRSLGDDIAHQAGVSSEPEVQEHQID 570
M++ G S ++V DGHG+ GHLVS+ K+ ID+ + L M L VD SSG+TCV+ + + + VAN GDS+ VL ++VN Q+ + L+ DHKPDRPDER R+ GGQVG R +++ N +R+P+GPARVWY RGE GLAMSRSLGD I H GVS EPEV + +D
Sbjct: 190 MEKVQGESHRHTWIVFDGHGDRGHLVSKFGREKMGKTWIDNKFRLRETFLSMQQQLNKSSVDVRSSGSTCVMVVLDNDCLKVANCGDSRAVLGKVVNSSSQLATIVLTDDHKPDRPDERMRVEKAGGQVGCRQMLM--NRGSSVRVPLGPARVWYTNRGETTGLAMSRSLGDAIVHTFGVSEEPEVTQRTLD 379
BLAST of mRNA_E-fasciculatus_F_contig14185.3056.1 vs. uniprot
Match: A0A7S2NWU1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NWU1_9STRA) HSP 1 Score: 145 bits (365), Expect = 1.370e-38 Identity = 79/190 (41.58%), Postives = 111/190 (58.42%), Query Frame = 1
Query: 7 EDLGGSGVRLFVVLDGHGELGHLVSRRCSAKLPNLVIDSNLCVARATLRMADDLRSCPVDCASSGATCVLTTIHDGK-ISVANLGDSKCV-LARLVNGQVCAVPLSHDHKPDRPDERQRILAIGGQVGSRHLVVGSNPSGPIRIPMGPARVWYRCRGEIMGLAMSRSLGDDIAHQAGVSSEPEVQEHQID 570
E+LG V ++V DGHG GH+VS+ C A LP ++ ++ RA + DL S +D SG TCV + + I V N+GDS+ + L R N + A+PLS DHKP + DER+RIL GG++ S+H G P+RVW+ MGLAMSRS+GD+ AH+ GVS EP++ H+I+
Sbjct: 116 EELGSPSV--YMVFDGHGRFGHVVSKHCKAVLPKILAETGYDQERAISVLQSDLESSAIDIECSGCTCVTAIVKQNRTIEVGNVGDSRAIILQRSPNNTLKALPLSIDHKPSQLDERKRILETGGRIASKHCSAG------------PSRVWFEYNNTTMGLAMSRSVGDEFAHRVGVSHEPQIFHHKIE 291 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14185.3056.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14185.3056.1 >prot_E-fasciculatus_F_contig14185.3056.1 ID=prot_E-fasciculatus_F_contig14185.3056.1|Name=mRNA_E-fasciculatus_F_contig14185.3056.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=191bp MKEDLGGSGVRLFVVLDGHGELGHLVSRRCSAKLPNLVIDSNLCVARATLback to top mRNA from alignment at E-fasciculatus_F_contig14185:2..2882- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14185.3056.1 ID=mRNA_E-fasciculatus_F_contig14185.3056.1|Name=mRNA_E-fasciculatus_F_contig14185.3056.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2881bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14185:2..2882- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14185:2..2882- >mRNA_E-fasciculatus_F_contig14185.3056.1 ID=mRNA_E-fasciculatus_F_contig14185.3056.1|Name=mRNA_E-fasciculatus_F_contig14185.3056.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1146bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14185:2..2882- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |