mRNA_E-fasciculatus_F_contig14167.3053.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14167.3053.1 vs. uniprot
Match: D7FSD5_ECTSI (Mitochondrial import receptor, Tom70 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSD5_ECTSI) HSP 1 Score: 355 bits (911), Expect = 5.150e-116 Identity = 187/198 (94.44%), Postives = 190/198 (95.96%), Query Frame = 1
Query: 7 RFNRANSKAKKLFTGQRYALAAEQYGIALELCDELPNHDNKRTALHNNRGAAYEKDGQYALALADCSMCLSREVGHKFARVRKSRVLEAMGKDEEALSEVCAHLLLERDRVQAKAALTPSEPLTPPAPPANLEGLLQKVASKRADAILLEREQTAEKEASAVAGGTGGAGTEKLKPLVKQVVMELLRSFGSYAQLEVR 600
RFNRANSKAKKLFTGQRYALAAEQYGIALELCDELPNHDNKRTALHNNRGAAYEKDGQYALALADCSMCLSREVGHKFARVRKSRVLEAMGK EEALSEVCAHLLLERDRVQAKAAL PSEPLTPPAPPANLEGLLQKVASKRADAILLEREQTAEK+ +A AGG G GTEKLKPLVKQVVMELLRSFGS+AQLE R
Sbjct: 171 RFNRANSKAKKLFTGQRYALAAEQYGIALELCDELPNHDNKRTALHNNRGAAYEKDGQYALALADCSMCLSREVGHKFARVRKSRVLEAMGKHEEALSEVCAHLLLERDRVQAKAALNPSEPLTPPAPPANLEGLLQKVASKRADAILLEREQTAEKQEAAAAGGAG-TGTEKLKPLVKQVVMELLRSFGSFAQLERR 367
BLAST of mRNA_E-fasciculatus_F_contig14167.3053.1 vs. uniprot
Match: A0A8J2SF76_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SF76_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 1.070e-14 Identity = 52/152 (34.21%), Postives = 82/152 (53.95%), Query Frame = 1
Query: 10 FNRANSKAKKLFTGQ--RYALAAEQYGIALELCDELPNHDNKRTALHNNRGAAYEKDGQYALALADCSMCLSREVGHKFARVRKSRVLEAMGKDEEALSEVCAHLLLERDRVQAKAALTPSEPLTPPAPPANLEGLLQKVASKRADAILLER 459
FN KA +LF RYA AAE + A++L +R AL+NNR A E+ +L DC++ L+ + H R R++R+ + +G++EEAL E+CA LL++R+ K AL P P N+E +++ V + A+ +L R
Sbjct: 64 FNSCKQKAFELFKASPPRYAEAAEWFSKAIDLSIAHETLAPQRKALYNNRSACRERCDDLEASLEDCAVVLASDPQHAKVRRRRARIFDKLGRNEEALVEICADLLIQREAF--KKALQAGRQADQPTPVDNVESVMRAVGAAAAEEVLAAR 213
BLAST of mRNA_E-fasciculatus_F_contig14167.3053.1 vs. uniprot
Match: A0A7S3K1R0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K1R0_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 4.740e-14 Identity = 50/148 (33.78%), Postives = 83/148 (56.08%), Query Frame = 1
Query: 28 KAKKLFTGQ--RYALAAEQYGIALELCDELPNHDNKRTALHNNRGAAYEKDGQYALALADCSMCLSREVGHKFARVRKSRVLEAMGKDEEALSEVCAHLLLERDRVQAKAALTPSEPLTPPAPPANLEGLLQKVASKRADAILLEREQ 465
KA +LF Y AA+ + A+ + + + +R AL+NNR A E+ G L+L DC++ L+ H R R++R+ E +G+ +AL E+CA LL++R+ K +L PAP N+E +++ V +RAD I+ ER++
Sbjct: 2 KAFELFKRNPPEYEEAADWFSKAITIAEAHESLVPQRIALYNNRSACRERFGALELSLEDCAVVLAANKTHAKVRRRRARIFEKLGRHADALVEICADLLIQRE--DFKRSLQQGRTPEQPAPAENVEAVMRAVGKQRADEIIAERKR 147
BLAST of mRNA_E-fasciculatus_F_contig14167.3053.1 vs. uniprot
Match: A0A7S2WS90_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WS90_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 1.750e-13 Identity = 52/160 (32.50%), Postives = 77/160 (48.12%), Query Frame = 1
Query: 10 FNRANSKAKKLFTGQRYALAAEQYGIALELCDELPNHDNKRTALHNNRGAAYEKDGQYALALADCSMCLSREVGHKFARVRKSRVLEAMGKDEEALSEVCAHLLLERDRVQAKAALTPSEP---------LTPPAPPANLEGLLQKVASKRADAILLERE 462
F + +S K F GQ+Y A E + A+E+ ++L K L+NNR A EK G+ +LADC L+ GH R R++R+ A ++AL E+CA LL ER+ + + P P PPA L+ ++Q I+ ERE
Sbjct: 148 FYKCSSVGTKYFKGQKYKQAHELFSRAIEIGEQLNLEQGKLETLYNNRSAVLEKLGRPMESLADCITVLAMNPGHSKVRKRRARIYMAQENPKDALVELCAVLLAERETARKQLEQYKDSPPQVQQMMMQKLAPQPPAELDTVMQACGKTEVARIMKERE 307
BLAST of mRNA_E-fasciculatus_F_contig14167.3053.1 vs. uniprot
Match: A0A6P5ZGK8_DURZI (tetratricopeptide repeat protein 1-like n=2 Tax=Durio zibethinus TaxID=66656 RepID=A0A6P5ZGK8_DURZI) HSP 1 Score: 54.7 bits (130), Expect = 1.600e-5 Identity = 30/90 (33.33%), Postives = 45/90 (50.00%), Query Frame = 1
Query: 1 LQRFNRANSKAKKLFTGQRYALAAEQYGIALELCDELPNHDNKRTALHNNRGAAYEKDGQYALALADCSMCLSREVGHKFARVRKSRVLE 270
L + N A + KLF Y A QYGIAL++ +E+P R+ H+NRG + K G+Y + +C+ L + A VR+ E
Sbjct: 93 LAQANDAKMEGNKLFGNGHYEEALLQYGIALQVTEEMPTSVEIRSICHSNRGVCFLKLGKYEETIKECTKALELNPSYVKALVRRGEAHE 182 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14167.3053.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14167.3053.1 >prot_E-fasciculatus_F_contig14167.3053.1 ID=prot_E-fasciculatus_F_contig14167.3053.1|Name=mRNA_E-fasciculatus_F_contig14167.3053.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=200bp LQRFNRANSKAKKLFTGQRYALAAEQYGIALELCDELPNHDNKRTALHNNback to top mRNA from alignment at E-fasciculatus_F_contig14167:684..3383+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14167.3053.1 ID=mRNA_E-fasciculatus_F_contig14167.3053.1|Name=mRNA_E-fasciculatus_F_contig14167.3053.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2700bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14167:684..3383+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14167:684..3383+ >mRNA_E-fasciculatus_F_contig14167.3053.1 ID=mRNA_E-fasciculatus_F_contig14167.3053.1|Name=mRNA_E-fasciculatus_F_contig14167.3053.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1200bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14167:684..3383+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |