mRNA_E-fasciculatus_F_contig14150.3044.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig14150.3044.1
Unique NamemRNA_E-fasciculatus_F_contig14150.3044.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig14150.3044.1 vs. uniprot
Match: A0A6H5JTL7_9PHAE (Rhomboid-like protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTL7_9PHAE)

HSP 1 Score: 587 bits (1512), Expect = 4.110e-205
Identity = 281/295 (95.25%), Postives = 287/295 (97.29%), Query Frame = 1
Query:    1 DDRPRNENGTTGEYAVPTYRSLIFTPLMFLICLILLFWEFGLNGWTAESLAENPSYGPSVETLIEAGAKRTDLIVDNGDWWRLISPMFLHAGVVHFLFNMLGFLQVGAMVERVFGWWRVACIYLVAGVFGTIVSAIFVPTQVMVGASGAIFGVFGALWADLWQNWSVNQDRCRMFTVLFILTAVNIILGMMPFLDNFAHCGGMLMGLFMGLGLLVQKREDDRGDRLHKKCYQ--ISLQLVAAVAVPTLMILGLSLLYGRSDPAEWCGWCENISCVEFPPGDNPWWACDECSTVGF 879
            DDRPRNENGTTGEYAVP+YRSLIFTPLMFLICLILLFWEFGLNGW AE L ENPSYGPSVETLI+AGAKR DLIVDNGDWWRLISPMFLHAGVVHFLFNMLGFLQVGAMVERVFGWWRVACIYLVAGVFGTIVSAIFVPTQVMVGASGAIFGVFGALWADLWQNWSVNQDRCRMFTVLFILTAVNIILG+MP+LDNFAHCGGMLMGLFMGLGLLVQKREDDRG RL KKCYQ  +SLQLVAAVAVPTLMILGLSLLYGRSDPAEWCGWCENISCVEFPPGD+PWWACDECSTVGF
Sbjct:  394 DDRPRNENGTTGEYAVPSYRSLIFTPLMFLICLILLFWEFGLNGWVAEPLEENPSYGPSVETLIDAGAKRGDLIVDNGDWWRLISPMFLHAGVVHFLFNMLGFLQVGAMVERVFGWWRVACIYLVAGVFGTIVSAIFVPTQVMVGASGAIFGVFGALWADLWQNWSVNQDRCRMFTVLFILTAVNIILGLMPYLDNFAHCGGMLMGLFMGLGLLVQKREDDRGYRLDKKCYQARVSLQLVAAVAVPTLMILGLSLLYGRSDPAEWCGWCENISCVEFPPGDSPWWACDECSTVGF 688          
BLAST of mRNA_E-fasciculatus_F_contig14150.3044.1 vs. uniprot
Match: D8LIB7_ECTSI (Rhomboid-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIB7_ECTSI)

HSP 1 Score: 569 bits (1467), Expect = 8.490e-198
Identity = 274/281 (97.51%), Postives = 278/281 (98.93%), Query Frame = 1
Query:    1 DDRPRNENGTTGEYAVPTYRSLIFTPLMFLICLILLFWEFGLNGWTAESLAENPSYGPSVETLIEAGAKRTDLIVDNGDWWRLISPMFLHAGVVHFLFNMLGFLQVGAMVERVFGWWRVACIYLVAGVFGTIVSAIFVPTQVMVGASGAIFGVFGALWADLWQNWSVNQDRCRMFTVLFILTAVNIILGMMPFLDNFAHCGGMLMGLFMGLGLLVQKREDDRGDRLHKKCYQISLQLVAAVAVPTLMILGLSLLYGRSDPAEWCGWCENISCVEFPPGDNP 843
            DDRPRNENGTTGEYAVPTYRSLIFTPLMFLICLILLFWEFGLNGW AESL ENPSYGPSVETLIEAGAKRTDLIVDNGDWWRLISPMFLHAGVVHFLFNMLGFLQVGAMVERVFGWWRVA IYLV+GVFGTIVSAIFVPTQVMVGASGAIFGVFGALWADLWQNWSVNQDRCRMFTVLFILTAVNIILG+MPFLDNFAHCGGMLMGLFMGLGLLVQKREDDRGDRL+KKCYQISLQLVAAVAVPTLMILGLSLLYGRSDPAEWCGWCENISCVEFPPGD+P
Sbjct:  396 DDRPRNENGTTGEYAVPTYRSLIFTPLMFLICLILLFWEFGLNGWEAESLEENPSYGPSVETLIEAGAKRTDLIVDNGDWWRLISPMFLHAGVVHFLFNMLGFLQVGAMVERVFGWWRVASIYLVSGVFGTIVSAIFVPTQVMVGASGAIFGVFGALWADLWQNWSVNQDRCRMFTVLFILTAVNIILGLMPFLDNFAHCGGMLMGLFMGLGLLVQKREDDRGDRLNKKCYQISLQLVAAVAVPTLMILGLSLLYGRSDPAEWCGWCENISCVEFPPGDSP 676          
BLAST of mRNA_E-fasciculatus_F_contig14150.3044.1 vs. uniprot
Match: A0A835YQV6_9STRA (Rhomboid-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQV6_9STRA)

HSP 1 Score: 281 bits (718), Expect = 7.660e-91
Identity = 140/261 (53.64%), Postives = 180/261 (68.97%), Query Frame = 1
Query:  103 LLFWEFGLNGWTAESLAENPSYGPSVETLIEAGAKRTDLIVDNGDWWRLISPMFLHAGVVHFLFNMLGFLQVGAMVERVFGWWRVACIYLVAGVFGTIVSAIFVPTQVMVGASGAIFGVFGALWADLWQNWSVNQDRCRMFTVLFILTAVNIILGMMPFLDNFAHCGGMLMGLFMGLGLLVQKREDDRGDRLHKKCYQISLQLVAAVAVPTLMILGLSLLYGRSDPA--EWCGWCENISCVEFPPGDNPWWACDECSTVGF 879
            +L WEF +N W  E L+ NPS G S ETL+E GAK  DLIV NG+ +RL+S +FLHAG++HF+FNML    +GA++ERVFG ++V  I++V+GVF T VSAIF+P QVMVGASGAI G+ G +WADL QNWS+ Q       VLF +TAVN++LG+MP+LDNFAH GG++MG F  L LLV + E   G  +     Q  LQ +  V    L++  L +L+G  + +  EWC WC N+SCVEFP GD P W CDECS  GF
Sbjct:    1 MLIWEFSVNDWKIEPLSVNPSIGVSAETLVECGAKVYDLIV-NGEAYRLLSAVFLHAGIIHFIFNMLALFSIGAVLERVFGGFKVLVIFIVSGVFSTAVSAIFLPYQVMVGASGAILGLLGGVWADLLQNWSLKQRPWVSIIVLFTITAVNLLLGLMPYLDNFAHMGGLVMGFFCSLPLLVMRAETAHGKLVAVSVRQRILQALGLVTSIALLVAALVVLFGSEEDSVNEWCSWCSNLSCVEFPKGD-PLWRCDECSQAGF 259          
BLAST of mRNA_E-fasciculatus_F_contig14150.3044.1 vs. uniprot
Match: A0A2R5GUE1_9STRA (Rhomboid-like protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GUE1_9STRA)

HSP 1 Score: 270 bits (691), Expect = 1.130e-85
Identity = 135/276 (48.91%), Postives = 181/276 (65.58%), Query Frame = 1
Query:   52 TYRSLIFTPLMFLICLILLFWEFGLNGWTAESLAENPSYGPSVETLIEAGAKRTDLIVDNGDWWRLISPMFLHAGVVHFLFNMLGFLQVGAMVERVFGWWRVACIYLVAGVFGTIVSAIFVPTQVMVGASGAIFGVFGALWADLWQNWSVNQDR-CRMFTVLFILTAVNIILGMMPFLDNFAHCGGMLMGLFMGLGLLVQKREDDRGDRLHKKCYQISLQLVAAVAVPTLMILGLSLLYGRSDPAEWCGWCENISCVEFPPGDNPWWACDECSTVG 876
            T R L+   L FL C ++L  EF +N W  ES + NP+ G SV TL+E GAKR DLI++ GDW+RLI+P+FLHAG++H+LFNM    Q+G  +E  FG    A I L+ G  G + SAI  P  V VGASGAIF +FG+ W++L  NWS+ + + C   T L + TAVN++LG+MPFLDNFAH  G + G+ +G G+LV  R    G+   +K YQ+ LQ ++ +  P L+++ L +LY   D  EWC WC  +SCV FPPGD+PWW CDECS  G
Sbjct:   66 TGRPLVCMTL-FLCCSVMLVIEFAVNNWELESFSTNPTIGVSVSTLLELGAKRADLILE-GDWYRLIAPIFLHAGILHYLFNMFALWQIGFPLENQFGSLAAALIILLGGFQGVVWSAILSPVTVGVGASGAIFALFGSAWSELILNWSLYKGQHCISITQLVLATAVNLMLGLMPFLDNFAHIAGFVTGILVGFGVLVSNRFTRWGELKERKRYQVVLQSLSVLITPLLVVVSLLVLYLGVDADEWCTWCRYLSCVPFPPGDSPWWTCDECSDAG 339          
BLAST of mRNA_E-fasciculatus_F_contig14150.3044.1 vs. uniprot
Match: A0A7S3UQB1_HETAK (Rhomboid-like protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UQB1_HETAK)

HSP 1 Score: 266 bits (680), Expect = 1.130e-82
Identity = 135/285 (47.37%), Postives = 179/285 (62.81%), Query Frame = 1
Query:   37 EYAV-PTYRSLIFTPLMFLICLILLFWEFGLNGWTAESLAENPSYGPSVETLIEAGAKRTDLIVDNGDWWRLISPMFLHAGVVHFLFNMLGFLQVGAMVERVFGWWRVACIYLVAGVFGTIVSAIFVPTQVMVGASGAIFGVFGALWADLWQNWSVNQDRCRMFTVLFILTAVNIILGMMPFLDNFAHCGGMLMGLFMGLGLLVQKREDDRGDRLHKKCYQISLQLVAAVAVPTLMILGLSLLYGRSDPAEWCGWCENISCVEFPPGDNP---WWACDECSTVGF 879
            EY + P   +L+F   M  IC ++  +E  L  W   S++ NP+ GP+ + L++AGAK T  IVD G+ WR+ +PMFLH+G+VH +FNM G   +   +ER  GW R+  IYL++G+FGT+ SAIFVP Q+MVGASGAIFG+ GA WADL QNWSV        + LF LTA N + G MP+LDNFAH GGM+ G+  GL LL Q R D  G    +KCYQ +L  +AA+    L++   + LY  +D    C  C  +SCVEFPPG  P   WW C  C++ GF
Sbjct:  159 EYTLSPRQTTLLFGYSMITICTVMFIFEMYLADWEFASISLNPTLGPTHDVLLKAGAKETSKIVDEGETWRIFTPMFLHSGLVHLVFNMTGLWYLVREMERTHGWQRLTVIYLLSGIFGTLCSAIFVPYQLMVGASGAIFGMVGARWADLIQNWSVLHKPWVELSFLFFLTASNYVFGFMPYLDNFAHTGGMVFGVLCGLVLLAQTRVDHFGFARGRKCYQTALATLAAMGTAALLMAATAWLYSSADVYAICPRCSKLSCVEFPPGAGPDGYWWDCSVCASSGF 443          
BLAST of mRNA_E-fasciculatus_F_contig14150.3044.1 vs. uniprot
Match: A0A7S3PMX5_9STRA (Rhomboid-like protein n=4 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PMX5_9STRA)

HSP 1 Score: 238 bits (606), Expect = 1.270e-71
Identity = 123/286 (43.01%), Postives = 177/286 (61.89%), Query Frame = 1
Query:   37 EYAVPTYRSLIFTPLMFL----ICLILLFWEFGLNGWTAESLAENPSYGPSVETLIEAGAKRTDLIVDNGDWWRLISPMFLHAGVVHFLFNMLGFLQVGAMVERVFGWWRVACIYLVAGVFGTIVSAIFVPTQVMVGASGAIFGVFGALWADLWQNWSVNQDRCRMFTV-LFILTAVNIILGMMPFLDNFAHCGGMLMGLFMGLGLLVQKREDDRGDRLHKKCYQISLQLVAAVAVPTLM-ILGLSLLYGRSDPAEWCGWCENISCVEFPPG---DNPWWACDECS 867
            EY +   R   + PL  L    +C I+      +NGW  E +  NP  GP VETL++ GAK +DLI D GDWWRL++PM LH G+VH L NMLG + +G  +E+ FG  R+A + + +G+FG ++SA+F P  V VGASGAIFG+FGA WADL QNW + + R ++    L I T  N  +G+MP+LDN+AH GG + GL +GL +L+ K   + G+   +  YQI+L+++AA+ +P L+ ++   L  G +D  + C  C   SC   PPG   D+ WW C +C+
Sbjct:   45 EYYIKHARPKTYKPLFTLGFLCLCCIMFVVSIAMNGWAVEPVQINPLIGPGVETLLDLGAKESDLIQD-GDWWRLLAPMVLHVGIVHLLANMLGLVVIGVPMEQEFGTLRIATVAISSGIFGVVMSALFAPHLVGVGASGAIFGLFGAAWADLAQNWELYRGRNKLILFQLIIYTVFNFAIGLMPYLDNWAHLGGFICGLVVGLAILI-KSYGELGEFRKRYAYQIALRVMAAIVLPILLGVMTFLLFVGAADFVKTCKICSYFSCYPMPPGASGDDLWWDCTDCT 328          
BLAST of mRNA_E-fasciculatus_F_contig14150.3044.1 vs. uniprot
Match: A0A2R5H0C6_9STRA (Rhomboid-like protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5H0C6_9STRA)

HSP 1 Score: 230 bits (586), Expect = 1.020e-69
Identity = 116/266 (43.61%), Postives = 173/266 (65.04%), Query Frame = 1
Query:   70 FTPLMFLICLILLFWEFGLNGWTAESLAENPSYGPSVETLIEAGAKRTDLIVDNGDWWRLISPMFLHAGVVHFLFNMLGFLQVGAMVERVFGWWRVACIYLVAGVFGTIVSAIFVPTQVMVGASGAIFGVFGALWADLWQNWSVNQDRCRMFTVLFILTAV-NIILGMMPFLDNFAHCGGMLMGLFMGLGLLVQKREDDRGDRLHKKCYQISLQLVAAVAVPTLMILGLSLLYGRSDPAEWCGWCENISCVEFPPG---DNPWWAC 855
            F+    ++ +I++  E G+NGW  E    NP  GPSVETL + GAK T LI++ G+++R+ +P+ LHAG VH LFN+L    +G  +ER FG  +++ I++ +G+FG ++SAIF+P Q+ VGASGA+FG+FGA W+DL  NWS+  +  +   +  +L  + N+ LG++P+LDNFAH GG   GLF+G  LLVQKR +  GD   +K YQ+ +Q +A V +P L ++   +LY   + A+ C WC  ISCV  P G   ++ WW C
Sbjct:  133 FSRCTAVVLIIVMIAEVGVNGWKLEDYQVNPLLGPSVETLSKMGAKDTSLILE-GEFYRIFTPIILHAGFVHLLFNLLALYNIGFSMERDFGSLKISIIFIGSGIFGVLLSAIFLPQQLSVGASGALFGLFGAAWSDLLHNWSLYGNSAKWVLLQLVLATIFNLGLGLLPYLDNFAHFGGFCCGLFLGFTLLVQKRYNIWGDLQQRKTYQVVVQSLALVILPILFVVLTLVLYLDVNVADSCDWCSYISCVPLPIGASEEDLWWEC 397          
BLAST of mRNA_E-fasciculatus_F_contig14150.3044.1 vs. uniprot
Match: A0A7S3PR50_9STRA (Rhomboid-like protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PR50_9STRA)

HSP 1 Score: 219 bits (558), Expect = 3.490e-65
Identity = 120/275 (43.64%), Postives = 159/275 (57.82%), Query Frame = 1
Query:   70 FTPLMFLICLILLFWEFGLN----GWTAESLAENPSYGPSVETLIEAGAKRTDLIVDNGDWWRLISPMFLHAGVVHFLFNMLGFLQVGAMVERVFGWWRVACIYLVAGVFGTIVSAIFVPTQVMVGASGAIFGVFGALWADLWQNWSVNQDRCR-MFTVLFILTAVNIILGMMPFLDNFAHCGGMLMGLFMGLGLLVQKREDDRGDRLHKKCYQISLQLVAAVAVPTLMILGLSLLYGRSDPAEWCGWCENISCVEFPPGDNPWWACDECSTVGF 879
            FT  M   C +++  E  +N    G   E  + NP +GPS+E L+  GAKRTDLIV  GDW+RL  PMFLH G++H LFNM      G+ +ER FG  RVA IY+ +G FG + SAIF PT   +GASGA +G+ GA WAD   N+S  +D+ + +F  LF  TA N  LG++P LDNFAH GG++ G F GL +L   R D   D    K YQI L+ +     P ++I+ + +LY + D   +C WC  +SCV       PWW C      GF
Sbjct:  113 FTRFMIGTCTLVMLVEVLINNKEQGKPFEDFSLNPLFGPSIEVLLLMGAKRTDLIVQEGDWYRLFMPMFLHGGILHLLFNMAFLYSFGSSLEREFGHTRVAYIYVTSGFFGVLCSAIFNPTIPSIGASGACYGLIGAAWADFLLNFSFYRDQWKCVFAQLFFGTAFNACLGLIPQLDNFAHLGGLVCGFFTGLSVLTLPRYDLYSDLKPDKLYQICLKSIGIFITPIVIIIFIIILYVQVDVESYCPWCIYLSCVP-----TPWWGCGVQCEEGF 382          
BLAST of mRNA_E-fasciculatus_F_contig14150.3044.1 vs. uniprot
Match: A0A7R9U3T8_9STRA (Rhomboid-like protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3T8_9STRA)

HSP 1 Score: 219 bits (558), Expect = 6.400e-65
Identity = 119/281 (42.35%), Postives = 168/281 (59.79%), Query Frame = 1
Query:   49 PTYRSLIF-TPLMFLICLILLFWEFGLNGWTAESLAENPSYGPSVETLIEAGAKRTDLIVDNGDWWRLISPMFLHAGVVHFLFNMLGFLQVGAMVERVFGWWRVACIYLVAGVFGTIVSAIFVPTQVMVGASGAIFGVFGALWADLWQNWSVNQDRCRMFTVLFILTAVNIILGMMPFLDNFAHCGGMLMGLFMGLGLLVQKREDDRGDRLHKKCYQISLQLVAAVAVPTLMILGLSLLYGRSDPAEWCG-WCENISCVEFPPGDNPWWACDE----CSTV 873
            PT R  ++ T L+ L   + + +E G NGW  +SL  NP +GP V+TL++ GA     I D G+WWRL   M+LHAG++HF+ N    +Q+G  +E++ G + +  IY+++G+F   +SA+F P  + VGASGA+FG+ G +WADL QNW +     R    LF+LT VN+++G+ P +DN+ H GG++MG  +GL L VQKR D       K  YQ  LQ+V AV    L+ L L+LLY   D  E CG  C+ ISCVE       +W C E    CS V
Sbjct:  128 PTPRRRVYVTYLILLGTAVAMVYEIGANGWKFDSLESNPFFGPDVDTLLDVGAINYFKITDEGEWWRLFVGMWLHAGIIHFVINGAVIVQLGRNLEQLHGPYSLVAIYILSGLFAATLSALFSPFTISVGASGALFGLLGGVWADLIQNWDLVYKPYRQLAGLFLLTVVNVLMGLAPLVDNYQHLGGLIMGTGVGLLLYVQKRYDALKRECPKLPYQAVLQIVGAVVSFNLLFLMLALLYAEVDVHEQCGVTCDRISCVE-----TSFWDCQEARHSCSGV 403          
BLAST of mRNA_E-fasciculatus_F_contig14150.3044.1 vs. uniprot
Match: A0A7S2RTG0_9STRA (Rhomboid-like protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RTG0_9STRA)

HSP 1 Score: 211 bits (536), Expect = 2.100e-64
Identity = 98/200 (49.00%), Postives = 138/200 (69.00%), Query Frame = 1
Query:  280 VHFLFNMLGFLQVGAMVERVFGWWRVACIYLVAGVFGTIVSAIFVPTQVMVGASGAIFGVFGALWADLWQNWSVNQDR-CRMFTVLFILTAVNIILGMMPFLDNFAHCGGMLMGLFMGLGLLVQKREDDRGDRLHKKCYQISLQLVAAVAVPTLMILGLSLLYGRSDPAEWCGWCENISCVEFPPGDNPWWACDECSTVG 876
            +H+LFNM+    VG  +ER FG   +  I+LV+G  G I SAIF P  + VGASG +FG+FGA W+DL  N+S+ + R CR+F  LF +T +N+I+G++P++DNFAH GG+L G+  G G+LV  R    G+   +K YQ+ LQ+++AV +P L+++ L +LY   +P EWC WC  +SCV+FPPG NPWW CD CS VG
Sbjct:    1 IHWLFNMIALTAVGFPLERQFGSGALLYIFLVSGFMGNIFSAIFSPLTIGVGASGGVFGIFGAAWSDLILNYSLYKGRVCRIFVQLFCVTFLNLIVGLIPYVDNFAHIGGLLTGMIAGFGVLVANRYSRYGELKERKRYQLVLQIMSAVLIPVLIVVCLFVLY-LGEPGEWCSWCHYMSCVQFPPGPNPWWTCDSCSNVG 199          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14150.3044.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JTL7_9PHAE4.110e-20595.25Rhomboid-like protein n=1 Tax=Ectocarpus sp. CCAP ... [more]
D8LIB7_ECTSI8.490e-19897.51Rhomboid-like protein n=1 Tax=Ectocarpus siliculos... [more]
A0A835YQV6_9STRA7.660e-9153.64Rhomboid-like protein n=1 Tax=Tribonema minus TaxI... [more]
A0A2R5GUE1_9STRA1.130e-8548.91Rhomboid-like protein n=1 Tax=Hondaea fermentalgia... [more]
A0A7S3UQB1_HETAK1.130e-8247.37Rhomboid-like protein n=1 Tax=Heterosigma akashiwo... [more]
A0A7S3PMX5_9STRA1.270e-7143.01Rhomboid-like protein n=4 Tax=Aplanochytrium stocc... [more]
A0A2R5H0C6_9STRA1.020e-6943.61Rhomboid-like protein n=1 Tax=Hondaea fermentalgia... [more]
A0A7S3PR50_9STRA3.490e-6543.64Rhomboid-like protein n=1 Tax=Aplanochytrium stocc... [more]
A0A7R9U3T8_9STRA6.400e-6542.35Rhomboid-like protein n=1 Tax=Pinguiococcus pyreno... [more]
A0A7S2RTG0_9STRA2.100e-6449.00Rhomboid-like protein (Fragment) n=1 Tax=labyrinth... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14150contigE-fasciculatus_F_contig14150:612..3411 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score569.3
Seed ortholog evalue1e-159
Seed eggNOG ortholog2880.D8LIB7
KEGG koko:K16571
GOsGO:0000139,GO:0002791,GO:0002792,GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005794,GO:0005886,GO:0005911,GO:0006508,GO:0006807,GO:0006928,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008283,GO:0009506,GO:0009894,GO:0009966,GO:0009987,GO:0010646,GO:0012505,GO:0016020,GO:0016477,GO:0016787,GO:0017171,GO:0019222,GO:0019538,GO:0023051,GO:0030054,GO:0030162,GO:0031090,GO:0031323,GO:0031329,GO:0031984,GO:0032268,GO:0032879,GO:0032880,GO:0040011,GO:0042058,GO:0042175,GO:0042176,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044238,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0048519,GO:0048523,GO:0048583,GO:0048870,GO:0050708,GO:0050709,GO:0050789,GO:0050794,GO:0051046,GO:0051048,GO:0051049,GO:0051051,GO:0051171,GO:0051179,GO:0051223,GO:0051224,GO:0051246,GO:0051674,GO:0055044,GO:0060255,GO:0061136,GO:0065007,GO:0070011,GO:0070201,GO:0071704,GO:0071944,GO:0080090,GO:0090087,GO:0098588,GO:0098791,GO:0098827,GO:0140096,GO:1901184,GO:1901564,GO:1903050,GO:1903362,GO:1903530,GO:1903531,GO:1904950
EggNOG free text desc.serine-type endopeptidase activity
EggNOG OGsCOG0705@1,KOG2289@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036,ko04812
Hectar predicted targeting categorysignal anchor
Exons5
Model size881
Cds size879
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14150.3044.1prot_E-fasciculatus_F_contig14150.3044.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig14150 614..3411 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927907.001848-CDS-E-fasciculatus_F_contig14150:613..7961622927907.001848-CDS-E-fasciculatus_F_contig14150:613..796Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14150 614..796 -
1695995746.7302315-CDS-E-fasciculatus_F_contig14150:613..7961695995746.7302315-CDS-E-fasciculatus_F_contig14150:613..796Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14150 614..796 -
1622927907.0192535-CDS-E-fasciculatus_F_contig14150:1062..12111622927907.0192535-CDS-E-fasciculatus_F_contig14150:1062..1211Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14150 1063..1211 -
1695995746.7405555-CDS-E-fasciculatus_F_contig14150:1062..12111695995746.7405555-CDS-E-fasciculatus_F_contig14150:1062..1211Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14150 1063..1211 -
1622927907.037727-CDS-E-fasciculatus_F_contig14150:1586..17791622927907.037727-CDS-E-fasciculatus_F_contig14150:1586..1779Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14150 1587..1779 -
1695995746.7485838-CDS-E-fasciculatus_F_contig14150:1586..17791695995746.7485838-CDS-E-fasciculatus_F_contig14150:1586..1779Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14150 1587..1779 -
1622927907.055265-CDS-E-fasciculatus_F_contig14150:2331..24291622927907.055265-CDS-E-fasciculatus_F_contig14150:2331..2429Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14150 2332..2429 -
1695995746.7567606-CDS-E-fasciculatus_F_contig14150:2331..24291695995746.7567606-CDS-E-fasciculatus_F_contig14150:2331..2429Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14150 2332..2429 -
1622927907.0696456-CDS-E-fasciculatus_F_contig14150:3155..34111622927907.0696456-CDS-E-fasciculatus_F_contig14150:3155..3411Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14150 3156..3411 -
1695995746.7649324-CDS-E-fasciculatus_F_contig14150:3155..34111695995746.7649324-CDS-E-fasciculatus_F_contig14150:3155..3411Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14150 3156..3411 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig14150.3044.1

>prot_E-fasciculatus_F_contig14150.3044.1 ID=prot_E-fasciculatus_F_contig14150.3044.1|Name=mRNA_E-fasciculatus_F_contig14150.3044.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=293bp
DDRPRNENGTTGEYAVPTYRSLIFTPLMFLICLILLFWEFGLNGWTAESL
AENPSYGPSVETLIEAGAKRTDLIVDNGDWWRLISPMFLHAGVVHFLFNM
LGFLQVGAMVERVFGWWRVACIYLVAGVFGTIVSAIFVPTQVMVGASGAI
FGVFGALWADLWQNWSVNQDRCRMFTVLFILTAVNIILGMMPFLDNFAHC
GGMLMGLFMGLGLLVQKREDDRGDRLHKKCYQISLQLVAAVAVPTLMILG
LSLLYGRSDPAEWCGWCENISCVEFPPGDNPWWACDECSTVGF
back to top

mRNA from alignment at E-fasciculatus_F_contig14150:612..3411-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig14150.3044.1 ID=mRNA_E-fasciculatus_F_contig14150.3044.1|Name=mRNA_E-fasciculatus_F_contig14150.3044.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2800bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14150:612..3411- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GACGATAGGCCGCGCAACGAGAACGGGACGACTGGGGAATACGCCGTGCC CACCTACCGAAGCCTCATCTTCACGCCGCTCATGTTCCTGATCTGCCTCA TCCTGCTGTTCTGGGAGTTCGGCCTGAACGGCTGGACGGCGGAGTCTTTG GCGGAGAACCCCTCGTACGGACCCAGCGTCGAAACCCTCATCGAGGCCGG CGCGAAGCGGACCGATCTGATCGTCGACAACGGGGACTGGTGGCGACTCA TCTCACGTGAGATGGATGTGTGCTGCTGTACTCGGTAGCCTGGTGTTTGG TAGCTAGCCTGGACAGCATTGGTTCTCGGGGGGGGTTCCGTGATTTTGAT GGACAATTAGGGAGGGGTATGCGTCTCTATCTATACCGTAGGGGAGTCGT TTGACTCGTGTGTGTGGCTTCCAATCGGGGCTCTTGTTTGTGAAATGTTA GGTGGTACGCAGGCTGCAGGCGGCGGGGTATAGTCCTTGCGTACCTGGGT TGTACATGAAGAAGAGGATGAATTACTGCTGTGGTAGTGAAACGACTGGT TTGCGGGATTTTTCACAATCCCCTTCGACAAGAAAGAAGGCTGTGTGCGG TGCCGGGGGTGACCTGCCCTATGTGTTCTGCCCATCTTCGCCTATTAGCA GGCTTGCCGTGTTTTCAACACCGACACTACGGGTGGTTGATACTTCGTTG TTCTTGTGTGCATGTGTATGATCTTGCATGCGGTATATTTTTCGCCAGGC GCGCTGCATCCTTATTTCCTTTTCGCACAGTTTCCATGCAGTGCTTGTTT TGTGGAATTGCTCTGGCGTACATCGTAGCCATCTGACCCGGCAGTAGAAC GCCGCTGTGTCCTCCCTCTTTGATGAAGCGGACATCACATCATATCGTCT ACTCCCTGTTCTCCTCGCGATCGTAACATCCCGCCGCCCCCTTCGCGTGC GCCATGTTTCTCTGTGAACCCTCCCCGCTCAGCGATGTTCCTGCACGCGG GCGTGGTGCATTTCCTGTTCAACATGCTGGGGTTCTTGCAAGTCGGGGCG ATGGTGGAGAGGGTCTTTGGGTGGTGGCGGGTGAGAAAGCGCTGTTGTGT CTATGTGCCTCAGTCTTCCTTTTTGCTGCTGCTGCTGCTGCTCTTGCTGT TGTTGGTGTCGGTGCTGTTGATGTTGCTGTTGCTGTTGTTTCCACTGCCG TCCGTTCGTTGGTGATGCTGTGGTTGTTGTTCCTTGCATCTTGGAGAGGC GCTTGTCTGTCTGGCTGCCCTTGTGATTGCGGTCTGCCTCGTAGCTACTC AGTACGTGGCTAGCTTTCCGAACCGCCAAAAAATTGTTTGTTCGGCGTTT GGGGGGGAGAAGAGGGAGCTGACAAAAGCGAACCGGGGGCCGAAAGATTC CAATACCACGCGAGCTGGTCAAGAATGAGAGCGAGCTCGTCCTGGCGGGG GGGCAGAAGGCAGCACAAACGAGCGTCGGAGGCTGGGGCCGACAGAGGAT CCAAACGGTTTCCAACTAATGTCTCAACAATAAGAGTAAAAAATACTGCT TTACGCGCCGCTGAGTCTTGGCTTGGACCACCGCTTACAGACGGTTTCAA CCCCCGCCCCGTTGCTCCCCGCCCCCCGACAGGTCGCGTGCATTTACCTG GTGGCAGGGGTGTTCGGGACCATCGTTTCGGCGATCTTCGTCCCCACGCA AGTCATGGTCGGAGCATCGGGGGCCATCTTTGGGGTATTCGGCGCGCTGT GGGCGGACCTGTGGCAGAACTGGAGCGTTAACCAGGACCGATGCAGGATG TTCACCGTTCTCTTTATTCTCACGGGTGAGTTTTTGTTTTGTCTGTTGCT TTCGTTGCCGAAGGTGTTGATACTGTTGCTGTTGTTGCTGTCGTTGCCGA AGGTGTTGATACTGTTCCGGAGGTTGTTGGTACTGTTGCTGCTGCTGTTG TTGCACAAGGTGGACAGATTTGATTACTGTAATAAAAGCATAAACAGGTA CGGCGCCGATATTGGCGCCGTGTTGGTTTGTGCTTTTGTCTTGTTATGCT CACCATCGCTTTGTTTTCTCCATCCTCCGCACTAGTCTCTAGTCTTGTTC ATTCATCATTGCTTTTGTCTCCTTCCTGTGTGTGCGTGTGTTTCTTCTTT TTCTCCCCCCTCCGTTTTTTGTCGCGATATTATCGGAACGGAATGACCAG CGGTCAACATCATTCTGGGCATGATGCCGTTCTTGGATAACTTCGCGCAC TGCGGCGGCATGCTGATGGGGTTATTCATGGGCCTGGGTCTGCTGGTGCA AAAGAGGGAGGATGACCGTGGGGACCGCCTCCACAAGAAGTGTTACCAGG TAAGGGTTGGGGTGCCTGAAAATGTTTACCGATAAGTCTTCGCGGGAGTG GCGTAGTCGTAGTCGTTGTTTCCATATTGACATCGTCGTTGCGGTTGTTT CACGGGGTCGTCGTTTGGGTTGGCGGTGAATCCACCGACCAGAAGCCGCC TAGTGGCAGCAGTTACTTTACAATCATTCTGGCGGCTGTTGCGTGGTAGC TTGCTTTCCCCTCGGCGCTCACACCGTTTTCGCGGCTACCACGAACCTGC TTCCTCGCGCGACAGATAAGCCTCCAGCTTGTGGCAGCGGTGGCTGTGCC CACGTTGATGATCCTCGGGCTCTCTCTCCTTTACGGGAGGTCGGATCCCG CGGAGTGGTGCGGTTGGTGCGAGAACATCTCGTGCGTGGAGTTTCCGCCG GGGGACAACCCGTGGTGGGCTTGCGACGAGTGCAGCACGGTCGGATTCGA
back to top

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14150:612..3411-

>mRNA_E-fasciculatus_F_contig14150.3044.1 ID=mRNA_E-fasciculatus_F_contig14150.3044.1|Name=mRNA_E-fasciculatus_F_contig14150.3044.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1758bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14150:612..3411- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GACGATAGGCCGCGCAACGAGAACGGGACGACTGGGGAATACGCCGTGCC
CACCTACCGAAGCCTCATCTTCACGCCGCTCATGTTCCTGATCTGCCTCA
TCCTGCTGTTCTGGGAGTTCGGCCTGAACGGCTGGACGGCGGAGTCTTTG
GCGGAGAACCCCTCGTACGGACCCAGCGTCGAAACCCTCATCGAGGCCGG
CGCGAAGCGGACCGATCTGATCGTCGACAACGGGGACTGGTGGCGACTCA
TCTCACGACGATAGGCCGCGCAACGAGAACGGGACGACTGGGGAATACGC
CGTGCCCACCTACCGAAGCCTCATCTTCACGCCGCTCATGTTCCTGATCT
GCCTCATCCTGCTGTTCTGGGAGTTCGGCCTGAACGGCTGGACGGCGGAG
TCTTTGGCGGAGAACCCCTCGTACGGACCCAGCGTCGAAACCCTCATCGA
GGCCGGCGCGAAGCGGACCGATCTGATCGTCGACAACGGGGACTGGTGGC
GACTCATCTCACCGATGTTCCTGCACGCGGGCGTGGTGCATTTCCTGTTC
AACATGCTGGGGTTCTTGCAAGTCGGGGCGATGGTGGAGAGGGTCTTTGG
GTGGTGGCGGCGATGTTCCTGCACGCGGGCGTGGTGCATTTCCTGTTCAA
CATGCTGGGGTTCTTGCAAGTCGGGGCGATGGTGGAGAGGGTCTTTGGGT
GGTGGCGGGTCGCGTGCATTTACCTGGTGGCAGGGGTGTTCGGGACCATC
GTTTCGGCGATCTTCGTCCCCACGCAAGTCATGGTCGGAGCATCGGGGGC
CATCTTTGGGGTATTCGGCGCGCTGTGGGCGGACCTGTGGCAGAACTGGA
GCGTTAACCAGGACCGATGCAGGATGTTCACCGTTCTCTTTATTCTCACG
GGTCGCGTGCATTTACCTGGTGGCAGGGGTGTTCGGGACCATCGTTTCGG
CGATCTTCGTCCCCACGCAAGTCATGGTCGGAGCATCGGGGGCCATCTTT
GGGGTATTCGGCGCGCTGTGGGCGGACCTGTGGCAGAACTGGAGCGTTAA
CCAGGACCGATGCAGGATGTTCACCGTTCTCTTTATTCTCACGGCGGTCA
ACATCATTCTGGGCATGATGCCGTTCTTGGATAACTTCGCGCACTGCGGC
GGCATGCTGATGGGGTTATTCATGGGCCTGGGTCTGCTGGTGCAAAAGAG
GGAGGATGACCGTGGGGACCGCCTCCACAAGAAGTGTTACCAGCGGTCAA
CATCATTCTGGGCATGATGCCGTTCTTGGATAACTTCGCGCACTGCGGCG
GCATGCTGATGGGGTTATTCATGGGCCTGGGTCTGCTGGTGCAAAAGAGG
GAGGATGACCGTGGGGACCGCCTCCACAAGAAGTGTTACCAGATAAGCCT
CCAGCTTGTGGCAGCGGTGGCTGTGCCCACGTTGATGATCCTCGGGCTCT
CTCTCCTTTACGGGAGGTCGGATCCCGCGGAGTGGTGCGGTTGGTGCGAG
AACATCTCGTGCGTGGAGTTTCCGCCGGGGGACAACCCGTGGTGGGCTTG
CGACGAGTGCAGCACGGTCGGATTCATAAGCCTCCAGCTTGTGGCAGCGG
TGGCTGTGCCCACGTTGATGATCCTCGGGCTCTCTCTCCTTTACGGGAGG
TCGGATCCCGCGGAGTGGTGCGGTTGGTGCGAGAACATCTCGTGCGTGGA
GTTTCCGCCGGGGGACAACCCGTGGTGGGCTTGCGACGAGTGCAGCACGG
TCGGATTC
back to top