prot_E-fasciculatus_F_contig1413.3024.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1413.3024.1
Unique Nameprot_E-fasciculatus_F_contig1413.3024.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length581
Homology
BLAST of mRNA_E-fasciculatus_F_contig1413.3024.1 vs. uniprot
Match: A0A6H5JY75_9PHAE (Rhomboid domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JY75_9PHAE)

HSP 1 Score: 469 bits (1208), Expect = 1.520e-157
Identity = 292/395 (73.92%), Postives = 301/395 (76.20%), Query Frame = 0
Query:    1 MERHGHHPQXXXXXXXXXXXTRRGTCAPGMRLLASAVLAAMALSHVAGSEALPSNPPALPRGASCGLKAFVPPGCNKLAATGVRGDRALAFQAFSSLRGGGFSWGSPEEQPQRQQQRQ---PSGRRGASGMFGASWGGGSPDNTNGXXXXXXXXXXXXGDKRPPRVETRGPPDLNTRLPATAPGSDGGXXXXXXXXXXXXXXXXXXXXXXSSRDRVKTVGPPDAGKKRTPVRARFSSLFCGGGGRRGGRRGLFSPGSAPTAPPMDQQQEQAG-GRFGGARPQLGWGGRAGVGRDDGEGEGPIRGWGEXXXXALSDRKRGLMAVHFLVLSCFGLFSLNTLFGVDRLFGLSLNHQRPRWWQSITSLLLHGDQHHLMGNMFNLIIFGKMAEEDMGSIG 391
            ME+ GH PQ           T RGTCA GMRLLASAV AAMALSHVAGSEALPSNPPALPRGASCGL AFVPP C KL ATG RGDRALAF+AFSSLRGGGFSWGSPE+Q           PS RRGASG+FGASWGGGSPD       X  XX    GDKRP RVETRGPPDLNTRLP TAPGSD     XXXXXXXXXXXXXXXXXXXSSR+RVKTVGPPDAGK+R PV ARFS+L+CG                                GRFGG RPQLGWGGRAGVG DDGEGEGP+RGWGE    ALS RKRGLMAVHFLVLSCFGLFSLNTLFGVDRLFGLSLNHQRPRWWQSITSLLLHGDQHHLMGNMFNLIIFGKMAEEDMGSIG
Sbjct:    1 MEQRGHLPQQQREQHRQ---TCRGTCAAGMRLLASAVFAAMALSHVAGSEALPSNPPALPRGASCGLNAFVPPVCKKLGATGPRGDRALAFRAFSSLRGGGFSWGSPEQQQXXXXXXXXXXPSVRRGASGLFGASWGGGSPDXXX----XGGXXGDKNGDKRP-RVETRGPPDLNTRLPPTAPGSD----DXXXXXXXXXXXXXXXXXXXSSRERVKTVGPPDAGKRRAPVCARFSTLYCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRFGGGRPQLGWGGRAGVGGDDGEGEGPVRGWGEGSRSALSGRKRGLMAVHFLVLSCFGLFSLNTLFGVDRLFGLSLNHQRPRWWQSITSLLLHGDQHHLMGNMFNLIIFGKMAEEDMGSIG 383          
BLAST of mRNA_E-fasciculatus_F_contig1413.3024.1 vs. uniprot
Match: A0A835YZA0_9STRA (Rhomboid domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZA0_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 1.340e-9
Identity = 36/86 (41.86%), Postives = 54/86 (62.79%), Query Frame = 0
Query:  313 KRGLMAVHFLVLSCFGLFSLNTLFGVDRLFGLSLNHQRPRWWQSITSLLLHGDQHHLMGNMFNLIIFGKMAEEDMGS---IGEFTI 395
            K G + VH LV+  F + ++  +  +D    L L+H RP+ WQ +T+L +H D+ HLM NMF L++FGKM EED+G    +G F +
Sbjct:  111 KGGTVVVHTLVVLSFIVHAVRNVMPLDF---LQLHHSRPQLWQLVTALFMHADKEHLMFNMFMLLVFGKMVEEDVGKSALLGSFLV 193          
BLAST of mRNA_E-fasciculatus_F_contig1413.3024.1 vs. uniprot
Match: A0A1Y1HVH4_KLENI (Rhomboid family proteins n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HVH4_KLENI)

HSP 1 Score: 64.7 bits (156), Expect = 1.510e-7
Identity = 30/73 (41.10%), Postives = 45/73 (61.64%), Query Frame = 0
Query:  319 VHFLVLSCFGLFSLNTLFGVDRLFGLSLNHQRPRWWQSITSLLLHGDQHHLMGNMFNLIIFGKMAEEDMGSIG 391
            +  L++   G++  + L  +  +  L LNH RP+WWQ +TS   H + +HL  N+F L IFGK+ EE+ GSIG
Sbjct:  147 IFLLLILNIGIYVADHLLHLPVMRSLYLNHVRPQWWQFVTSTFCHFNWNHLSSNLFFLYIFGKLVEEEEGSIG 219          
BLAST of mRNA_E-fasciculatus_F_contig1413.3024.1 vs. uniprot
Match: A0A830HE23_9CHLO (Rhomboid domain-containing protein n=2 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HE23_9CHLO)

HSP 1 Score: 62.8 bits (151), Expect = 5.110e-7
Identity = 33/76 (43.42%), Postives = 47/76 (61.84%), Query Frame = 0
Query:  316 LMAVHFLVLSCFGLFSLNTLFGVDRLFGLSLNHQRPRWWQSITSLLLHGDQHHLMGNMFNLIIFGKMAEEDMGSIG 391
            L+A++F+      LF+L+ LF  + +  L LNHQRP W+Q +TS   H +  HL  N F L IFGK+ EE+ G+ G
Sbjct:  125 LLAINFV------LFALDHLFHQNWVKWLYLNHQRPVWFQFVTSTFCHANYAHLSSNAFFLYIFGKLVEEEEGTFG 194          
BLAST of mRNA_E-fasciculatus_F_contig1413.3024.1 vs. uniprot
Match: A0A7J0DQR0_9ERIC (Rhomboid domain-containing protein n=1 Tax=Actinidia rufa TaxID=165716 RepID=A0A7J0DQR0_9ERIC)

HSP 1 Score: 58.9 bits (141), Expect = 1.810e-6
Identity = 28/71 (39.44%), Postives = 41/71 (57.75%), Query Frame = 0
Query:  319 VHFLVLSCFGLFSLNTLFGVDRLFGLSLNHQRPRWWQSITSLLLHGDQHHLMGNMFNLIIFGKMAEEDMGS 389
            + +++L   GL+  + LF V  +  L   H RP W+Q +TS   H +  HL  N+F L IFGK+ EED G+
Sbjct:   23 IFWIILLNLGLYVADHLFQVRGIKDLYFYHNRPAWYQFVTSTFCHANWQHLSSNLFFLYIFGKLVEEDEGN 93          
BLAST of mRNA_E-fasciculatus_F_contig1413.3024.1 vs. uniprot
Match: A0A8B7BMR9_PHODC (rhomboid-like protein 11, chloroplastic isoform X1 n=2 Tax=Phoenix dactylifera TaxID=42345 RepID=A0A8B7BMR9_PHODC)

HSP 1 Score: 59.7 bits (143), Expect = 4.570e-6
Identity = 27/72 (37.50%), Postives = 43/72 (59.72%), Query Frame = 0
Query:  319 VHFLVLSCFGLFSLNTLFGVDRLFGLSLNHQRPRWWQSITSLLLHGDQHHLMGNMFNLIIFGKMAEEDMGSI 390
            + +++L   G++  + LF +  +  L L H  P W+Q +T+   H + HHL  N+F L IFGK+ EED GS+
Sbjct:  100 IFWILLLNLGIYVADHLFQLQEIKTLYLYHSWPSWYQFVTATFCHANWHHLSSNLFFLYIFGKLVEEDEGSL 171          
BLAST of mRNA_E-fasciculatus_F_contig1413.3024.1 vs. uniprot
Match: A0A2R6PH94_ACTCC (Rhomboid-like protein n=1 Tax=Actinidia chinensis var. chinensis TaxID=1590841 RepID=A0A2R6PH94_ACTCC)

HSP 1 Score: 58.9 bits (141), Expect = 8.240e-6
Identity = 28/71 (39.44%), Postives = 41/71 (57.75%), Query Frame = 0
Query:  319 VHFLVLSCFGLFSLNTLFGVDRLFGLSLNHQRPRWWQSITSLLLHGDQHHLMGNMFNLIIFGKMAEEDMGS 389
            + +++L   GL+  + LF V  +  L   H RP W+Q +TS   H +  HL  N+F L IFGK+ EED G+
Sbjct:   98 IFWIILLNLGLYVADHLFQVRGIKDLYFYHNRPAWYQFVTSTFCHANWQHLSSNLFFLYIFGKLVEEDEGN 168          
BLAST of mRNA_E-fasciculatus_F_contig1413.3024.1 vs. uniprot
Match: A0A7N1A2K0_KALFE (Rhomboid domain-containing protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N1A2K0_KALFE)

HSP 1 Score: 57.4 bits (137), Expect = 3.350e-5
Identity = 27/74 (36.49%), Postives = 45/74 (60.81%), Query Frame = 0
Query:  318 AVHFLVLSCFGLFSLNTLFGVDRLFGLSLNHQRPRWWQSITSLLLHGDQHHLMGNMFNLIIFGKMAEEDMGSIG 391
            ++ +++L   G++  + +  V  +  L L H RP W+Q +TS L H + +HL  N+F L IFGK+ EE+ G+ G
Sbjct:  135 SIFWIILLNLGIYVADHVLQVRGIRILYLYHNRPVWYQFVTSTLCHANWNHLSSNLFFLYIFGKLVEEEEGNFG 208          
BLAST of mRNA_E-fasciculatus_F_contig1413.3024.1 vs. uniprot
Match: A0A834HLM0_RHOSS (Rhomboid domain-containing protein n=1 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834HLM0_RHOSS)

HSP 1 Score: 57.0 bits (136), Expect = 3.640e-5
Identity = 26/71 (36.62%), Postives = 42/71 (59.15%), Query Frame = 0
Query:  319 VHFLVLSCFGLFSLNTLFGVDRLFGLSLNHQRPRWWQSITSLLLHGDQHHLMGNMFNLIIFGKMAEEDMGS 389
            + +++L   G++ ++  F V  +  L   H RP W+Q +TS   H + +HL  N+F L IFGK+ EE+ GS
Sbjct:  102 IFWILLLNMGIYVVDHFFQVRGIKALYFYHNRPTWYQFVTSTFCHANWNHLSSNLFFLYIFGKLVEEEEGS 172          
BLAST of mRNA_E-fasciculatus_F_contig1413.3024.1 vs. uniprot
Match: UPI0012637B45 (rhomboid-like protein 11, chloroplastic n=1 Tax=Pistacia vera TaxID=55513 RepID=UPI0012637B45)

HSP 1 Score: 57.0 bits (136), Expect = 3.760e-5
Identity = 26/71 (36.62%), Postives = 42/71 (59.15%), Query Frame = 0
Query:  319 VHFLVLSCFGLFSLNTLFGVDRLFGLSLNHQRPRWWQSITSLLLHGDQHHLMGNMFNLIIFGKMAEEDMGS 389
            + +++L   GL+  + +F V  +  L   H RP W+Q +TS   H + +HL  N+F L IFGK+ EE+ G+
Sbjct:  105 IFWIILINLGLYVADHVFQVRGIKSLYFYHNRPTWYQFVTSTFCHANWNHLSSNLFFLYIFGKLVEEEEGN 175          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1413.3024.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A6H5JY75_9PHAE1.520e-15773.92Rhomboid domain-containing protein n=2 Tax=Ectocar... [more]
A0A835YZA0_9STRA1.340e-941.86Rhomboid domain-containing protein n=1 Tax=Tribone... [more]
A0A1Y1HVH4_KLENI1.510e-741.10Rhomboid family proteins n=1 Tax=Klebsormidium nit... [more]
A0A830HE23_9CHLO5.110e-743.42Rhomboid domain-containing protein n=2 Tax=Pycnoco... [more]
A0A7J0DQR0_9ERIC1.810e-639.44Rhomboid domain-containing protein n=1 Tax=Actinid... [more]
A0A8B7BMR9_PHODC4.570e-637.50rhomboid-like protein 11, chloroplastic isoform X1... [more]
A0A2R6PH94_ACTCC8.240e-639.44Rhomboid-like protein n=1 Tax=Actinidia chinensis ... [more]
A0A7N1A2K0_KALFE3.350e-536.49Rhomboid domain-containing protein n=1 Tax=Kalanch... [more]
A0A834HLM0_RHOSS3.640e-536.62Rhomboid domain-containing protein n=1 Tax=Rhodode... [more]
UPI0012637B453.760e-536.62rhomboid-like protein 11, chloroplastic n=1 Tax=Pi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 579..580
NoneNo IPR availablePANTHERPTHR43066RHOMBOID-RELATED PROTEINcoord: 316..401
NoneNo IPR availablePANTHERPTHR43066:SF5RHOMBOID-LIKE PROTEIN 11, CHLOROPLASTIC-RELATEDcoord: 316..401
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 337..355
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 316..336
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 379..389
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 390..408
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 356..378
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..315
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 409..580
NoneNo IPR availableSUPERFAMILY144091Rhomboid-likecoord: 318..408
NoneNo IPR availableTMHMMTMhelixcoord: 316..338
IPR022764Peptidase S54, rhomboid domainPFAMPF01694Rhomboidcoord: 349..401
e-value: 4.2E-9
score: 36.6
IPR035952Rhomboid-like superfamilyGENE3D1.20.1540.10coord: 312..416
e-value: 2.0E-9
score: 39.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1413contigE-fasciculatus_F_contig1413:723..7132 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1413.3024.1mRNA_E-fasciculatus_F_contig1413.3024.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1413 327..10784 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1413.3024.1 ID=prot_E-fasciculatus_F_contig1413.3024.1|Name=mRNA_E-fasciculatus_F_contig1413.3024.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=581bp
MERHGHHPQQQQQQREQQQQTRRGTCAPGMRLLASAVLAAMALSHVAGSE
ALPSNPPALPRGASCGLKAFVPPGCNKLAATGVRGDRALAFQAFSSLRGG
GFSWGSPEEQPQRQQQRQPSGRRGASGMFGASWGGGSPDNTNGNSDNSNG
DNNNNGDKRPPRVETRGPPDLNTRLPATAPGSDGGSGGGGGGGFFSGIGG
GGGGGGGSSRDRVKTVGPPDAGKKRTPVRARFSSLFCGGGGRRGGRRGLF
SPGSAPTAPPMDQQQEQAGGRFGGARPQLGWGGRAGVGRDDGEGEGPIRG
WGEXXXXALSDRKRGLMAVHFLVLSCFGLFSLNTLFGVDRLFGLSLNHQR
PRWWQSITSLLLHGDQHHLMGNMFNLIIFGKMAEEDMGSIGEFTILAFEM
VVVVFLRWRSSCSPACASSKIRNGKKLPTSTARGTQPRERKMGCAFLPLR
WSRVKKYMCFPFFGGGRASCVCVRVSTGNDTVSEGSVTQVLSSRMHTRTR
HGAGRGRYVCSSSRESVFVRARWCLTPRTRARAEGVNVSWKCLWFTYAYR
CCVIFLRFPQRPGNDSSASGERAQTYCVAS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035952Rhomboid-like_sf
IPR022764Peptidase_S54_rhomboid_dom