mRNA_E-fasciculatus_F_contig14116.3014.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14116.3014.1 vs. uniprot
Match: D7FTW8_ECTSI (Calpain catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW8_ECTSI) HSP 1 Score: 110 bits (274), Expect = 6.810e-27 Identity = 50/51 (98.04%), Postives = 51/51 (100.00%), Query Frame = 1
Query: 7 KGAVGDCWFLAGLAVVSERADLIGRVVGSNGPLADELGCFEVNLFKDGRWE 159
+GAVGDCWFLAGLAVVSERADLIGRVVGSNGPLADELGCFEVNLFKDGRWE
Sbjct: 280 QGAVGDCWFLAGLAVVSERADLIGRVVGSNGPLADELGCFEVNLFKDGRWE 330
BLAST of mRNA_E-fasciculatus_F_contig14116.3014.1 vs. uniprot
Match: A0A5B8MKZ2_9CHLO (Calpain-type cysteine proteinase n=2 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MKZ2_9CHLO) HSP 1 Score: 55.8 bits (133), Expect = 1.060e-7 Identity = 25/53 (47.17%), Postives = 37/53 (69.81%), Query Frame = 1
Query: 7 KGAVGDCWFLAGLAVVSERADLIGRVVGSNGPLA--DELGCFEVNLFKDGRWE 159
+GAVGDCWFL+GLAV++ER DL+ R+ P+ ++ G +E + DG+WE
Sbjct: 242 QGAVGDCWFLSGLAVIAERKDLVERIF----PVTQRNDEGVYECKFYIDGQWE 290
BLAST of mRNA_E-fasciculatus_F_contig14116.3014.1 vs. uniprot
Match: A0A7R9UAM0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UAM0_9STRA) HSP 1 Score: 55.5 bits (132), Expect = 1.460e-7 Identity = 24/53 (45.28%), Postives = 35/53 (66.04%), Query Frame = 1
Query: 1 LPKGAVGDCWFLAGLAVVSERADLIGRVVGSNGPLADELGCFEVNLFKDGRWE 159
+ +G VGDCWFLA LA +SER DL+ +V + + G +++ LF DGRW+
Sbjct: 162 IQQGKVGDCWFLAALATISERRDLLENLVVTRE--VNAAGIYQIRLFIDGRWQ 212
BLAST of mRNA_E-fasciculatus_F_contig14116.3014.1 vs. uniprot
Match: UPI00106A7332 (calpain-15-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106A7332) HSP 1 Score: 50.8 bits (120), Expect = 6.260e-6 Identity = 21/50 (42.00%), Postives = 36/50 (72.00%), Query Frame = 1
Query: 7 KGAVGDCWFLAGLAVVSERADLIGRVVGSNGPLADELGCFEVNLFKDGRW 156
+G +GDCW L+ LAV++ER +L+ +++ + + DE G +++ L KDGRW
Sbjct: 352 QGVLGDCWLLSALAVLTERPNLLEKIIVTR-KICDE-GAYQIRLCKDGRW 399
BLAST of mRNA_E-fasciculatus_F_contig14116.3014.1 vs. uniprot
Match: UPI001F0412CA (calpain-15-like isoform X1 n=2 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F0412CA) HSP 1 Score: 50.4 bits (119), Expect = 8.540e-6 Identity = 21/50 (42.00%), Postives = 35/50 (70.00%), Query Frame = 1
Query: 7 KGAVGDCWFLAGLAVVSERADLIGRVVGSNGPLADELGCFEVNLFKDGRW 156
+G +GDCW L+ LAV++ER +LI +++ + A+ G +++ L KDGRW
Sbjct: 354 QGVLGDCWLLSALAVLTERPNLIQKIIITRELCAE--GAYQIRLCKDGRW 401
BLAST of mRNA_E-fasciculatus_F_contig14116.3014.1 vs. uniprot
Match: A0A1D2MY43_ORCCI (Calpain-D n=1 Tax=Orchesella cincta TaxID=48709 RepID=A0A1D2MY43_ORCCI) HSP 1 Score: 49.3 bits (116), Expect = 2.190e-5 Identity = 20/49 (40.82%), Postives = 33/49 (67.35%), Query Frame = 1
Query: 10 GAVGDCWFLAGLAVVSERADLIGRVVGSNGPLADELGCFEVNLFKDGRW 156
GA+G+CWF+A LA++ ER +L+ +++ + + G + V LFKDG W
Sbjct: 150 GALGNCWFVAALALLCERKELLAKILATG--QINAAGVYIVRLFKDGNW 196
BLAST of mRNA_E-fasciculatus_F_contig14116.3014.1 vs. uniprot
Match: UPI001458E140 (calpain-B-like n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI001458E140) HSP 1 Score: 49.3 bits (116), Expect = 2.190e-5 Identity = 24/53 (45.28%), Postives = 32/53 (60.38%), Query Frame = 1
Query: 1 LPKGAVGDCWFLAGLAVVSERADLIGRVVGSNGPL-ADELGCFEVNLFKDGRW 156
L +G++GDCWF+AG AVV+ LI RVV S+ D G F N + G+W
Sbjct: 77 LDQGSLGDCWFIAGAAVVATHGKLIERVVPSDQDFDVDYAGIFHFNFWWYGKW 129
BLAST of mRNA_E-fasciculatus_F_contig14116.3014.1 vs. uniprot
Match: A0A0B7JWG9_BIOOC (Calpain catalytic domain-containing protein n=2 Tax=Bionectria ochroleuca TaxID=29856 RepID=A0A0B7JWG9_BIOOC) HSP 1 Score: 48.5 bits (114), Expect = 4.100e-5 Identity = 20/52 (38.46%), Postives = 32/52 (61.54%), Query Frame = 1
Query: 1 LPKGAVGDCWFLAGLAVVSERADLIGRVVGSNGPLADELGCFEVNLFKDGRW 156
+ +GA+GDCW+LAGL ++ R DL+ +V + +E G + F+DG W
Sbjct: 139 IAQGALGDCWWLAGLGTIAHRKDLMDKVCVARN---EECGVYGFVFFRDGEW 187
BLAST of mRNA_E-fasciculatus_F_contig14116.3014.1 vs. uniprot
Match: A0A6J8B1U3_MYTCO (CAPN15 n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8B1U3_MYTCO) HSP 1 Score: 48.5 bits (114), Expect = 4.110e-5 Identity = 22/51 (43.14%), Postives = 33/51 (64.71%), Query Frame = 1
Query: 7 KGAVGDCWFLAGLAVVSERADLIGRVVGSNGPLADELGCFEVNLFKDGRWE 159
+G +G+CWF+ LAVVSER +L+ R+V + + G + V L KDG W+
Sbjct: 320 QGEIGNCWFICALAVVSERKNLVERIVVTKDYCPE--GAYVVRLCKDGIWK 368 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14116.3014.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14116.3014.1 >prot_E-fasciculatus_F_contig14116.3014.1 ID=prot_E-fasciculatus_F_contig14116.3014.1|Name=mRNA_E-fasciculatus_F_contig14116.3014.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=53bp LPKGAVGDCWFLAGLAVVSERADLIGRVVGSNGPLADELGCFEVNLFKDGback to top mRNA from alignment at E-fasciculatus_F_contig14116:2711..2869+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14116.3014.1 ID=mRNA_E-fasciculatus_F_contig14116.3014.1|Name=mRNA_E-fasciculatus_F_contig14116.3014.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=159bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14116:2711..2869+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14116:2711..2869+ >mRNA_E-fasciculatus_F_contig14116.3014.1 ID=mRNA_E-fasciculatus_F_contig14116.3014.1|Name=mRNA_E-fasciculatus_F_contig14116.3014.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=318bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14116:2711..2869+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |